RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 STK31Q9BXU1 1019 aa21.65■■□□□ 1.06
COL6A2-205ENST00000413758 SCN4AP35499 1836 aa21.64■■□□□ 1.06
COL6A2-205ENST00000413758 IRS4O14654 1257 aaPredicted RBP21.64■■□□□ 1.05
COL6A2-205ENST00000413758 LMOD1P29536 600 aaPredicted RBP21.64■■□□□ 1.05
COL6A2-205ENST00000413758 EPHX2P34913 555 aa21.64■■□□□ 1.05
COL6A2-205ENST00000413758 LDHDQ86WU2 507 aa21.64■■□□□ 1.05
COL6A2-205ENST00000413758 TRIM28Q13263 835 aaKnown RBP21.63■■□□□ 1.05
COL6A2-205ENST00000413758 HSP90B1P14625 803 aaKnown RBP21.62■■□□□ 1.05
COL6A2-205ENST00000413758 TWISTNBQ3B726 338 aaPredicted RBP21.62■■□□□ 1.05
COL6A2-205ENST00000413758 TMC4Q7Z404 712 aa21.62■■□□□ 1.05
COL6A2-205ENST00000413758 COL4A5P29400 1685 aa21.62■■□□□ 1.05
COL6A2-205ENST00000413758 DDX60Q8IY21 1712 aaKnown RBP21.61■■□□□ 1.05
COL6A2-205ENST00000413758 SF3B3Q15393 1217 aaKnown RBP21.61■■□□□ 1.05
COL6A2-205ENST00000413758 PNMA8AQ86V59 439 aaPredicted RBP21.61■■□□□ 1.05
COL6A2-205ENST00000413758 FAM9BQ8IZU0 186 aa21.61■■□□□ 1.05
COL6A2-205ENST00000413758 ZBTB38Q8NAP3 1195 aaPredicted RBP21.61■■□□□ 1.05
COL6A2-205ENST00000413758 VPS33BQ9H267 617 aa21.61■■□□□ 1.05
COL6A2-205ENST00000413758 CWC25Q9NXE8 425 aaPredicted RBP21.61■■□□□ 1.05
COL6A2-205ENST00000413758 MAP3K2Q9Y2U5 619 aa21.61■■□□□ 1.05
COL6A2-205ENST00000413758 TAF1P21675 1872 aa21.6■■□□□ 1.05
COL6A2-205ENST00000413758 IL16Q14005 1332 aa21.6■■□□□ 1.05
COL6A2-205ENST00000413758 CCDC191Q8NCU4 936 aa21.6■■□□□ 1.05
COL6A2-205ENST00000413758 METTL22Q9BUU2 404 aaPredicted RBP21.6■■□□□ 1.05
COL6A2-205ENST00000413758 JARID2Q92833 1246 aaPredicted RBP21.59■■□□□ 1.05
COL6A2-205ENST00000413758 CELF1Q92879 486 aaKnown RBP21.59■■□□□ 1.05
COL6A2-205ENST00000413758 RTFDC1Q9BY42 306 aaPredicted RBP21.59■■□□□ 1.05
COL6A2-205ENST00000413758 ZNRF3Q9ULT6 936 aa21.59■■□□□ 1.05
COL6A2-205ENST00000413758 NSFL1CQ9UNZ2 370 aaKnown RBP21.58■■□□□ 1.05
COL6A2-205ENST00000413758 PI4KAP2A4QPH2 592 aa21.57■■□□□ 1.04
COL6A2-205ENST00000413758 PCCAP05165 728 aaPredicted RBP21.57■■□□□ 1.04
COL6A2-205ENST00000413758 NEXNQ0ZGT2 675 aa21.57■■□□□ 1.04
COL6A2-205ENST00000413758 KSR2Q6VAB6 950 aa21.57■■□□□ 1.04
COL6A2-205ENST00000413758 PI4KAP1Q8N8J0 262 aa21.57■■□□□ 1.04
COL6A2-205ENST00000413758 C6orf229H3BNL8 230 aa21.56■■□□□ 1.04
COL6A2-205ENST00000413758 SLC4A2P04920 1241 aa21.56■■□□□ 1.04
COL6A2-205ENST00000413758 KIAA2012Q0VF49 1180 aa21.56■■□□□ 1.04
COL6A2-205ENST00000413758 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
COL6A2-205ENST00000413758 WDR63Q8IWG1 891 aa21.56■■□□□ 1.04
COL6A2-205ENST00000413758 CCDC85AQ96PX6 553 aaPredicted RBP21.56■■□□□ 1.04
COL6A2-205ENST00000413758 FANCIQ9NVI1 1328 aa21.55■■□□□ 1.04
COL6A2-205ENST00000413758 PDE8AO60658 829 aa21.55■■□□□ 1.04
COL6A2-205ENST00000413758 EPS15P42566 896 aa21.55■■□□□ 1.04
COL6A2-205ENST00000413758 RPS8P62241 208 aaKnown RBP21.55■■□□□ 1.04
COL6A2-205ENST00000413758 CXCL9Q07325 125 aa21.55■■□□□ 1.04
COL6A2-205ENST00000413758 CCDC152Q4G0S7 254 aa21.55■■□□□ 1.04
COL6A2-205ENST00000413758 MAP1SQ66K74 1059 aaPredicted RBP21.55■■□□□ 1.04
COL6A2-205ENST00000413758 CREBZFQ9NS37 354 aa21.55■■□□□ 1.04
COL6A2-205ENST00000413758 RIMBP2O15034 1052 aa21.54■■□□□ 1.04
COL6A2-205ENST00000413758 RAD17O75943 681 aa21.54■■□□□ 1.04
COL6A2-205ENST00000413758 SCNN1DP51172 638 aa21.54■■□□□ 1.04
COL6A2-205ENST00000413758 WASHC4Q2M389 1173 aa21.54■■□□□ 1.04
COL6A2-205ENST00000413758 CIAPIN1Q6FI81 312 aa21.54■■□□□ 1.04
COL6A2-205ENST00000413758 JMYQ8N9B5 988 aa21.54■■□□□ 1.04
COL6A2-205ENST00000413758 BCL2L13Q9BXK5 485 aa21.54■■□□□ 1.04
COL6A2-205ENST00000413758 SEC31BQ9NQW1 1179 aa21.54■■□□□ 1.04
COL6A2-205ENST00000413758 GPSM2P81274 684 aa21.53■■□□□ 1.04
COL6A2-205ENST00000413758 TNIP1Q15025 636 aa21.53■■□□□ 1.04
COL6A2-205ENST00000413758 G2E3Q7L622 706 aa21.53■■□□□ 1.04
COL6A2-205ENST00000413758 CNTROBQ8N137 903 aa21.53■■□□□ 1.04
COL6A2-205ENST00000413758 MKRN1Q9UHC7 482 aaKnown RBP21.53■■□□□ 1.04
COL6A2-205ENST00000413758 GMPSP49915 693 aaPredicted RBP21.52■■□□□ 1.04
COL6A2-205ENST00000413758 EYA3Q99504 573 aa21.52■■□□□ 1.04
COL6A2-205ENST00000413758 PASKQ96RG2 1323 aa21.52■■□□□ 1.03
COL6A2-205ENST00000413758 ITGBL1O95965 494 aaPredicted RBP21.51■■□□□ 1.03
COL6A2-205ENST00000413758 IGKV5-2P06315 115 aa21.51■■□□□ 1.03
COL6A2-205ENST00000413758 EXOSC9Q06265 439 aaKnown RBP21.51■■□□□ 1.03
COL6A2-205ENST00000413758 USP50Q70EL3 339 aaPredicted RBP21.51■■□□□ 1.03
COL6A2-205ENST00000413758 GPRC5DQ9NZD1 345 aa21.51■■□□□ 1.03
COL6A2-205ENST00000413758 ANKIB1Q9P2G1 1089 aa21.51■■□□□ 1.03
COL6A2-205ENST00000413758 LRRC37AA6NMS7 1700 aa21.5■■□□□ 1.03
COL6A2-205ENST00000413758 TMEM88BA6NKF7 163 aa21.5■■□□□ 1.03
COL6A2-205ENST00000413758 G3V3G9 751 aa21.5■■□□□ 1.03
COL6A2-205ENST00000413758 FLIIQ13045 1269 aa21.5■■□□□ 1.03
COL6A2-205ENST00000413758 FKBP5Q13451 457 aaPredicted RBP21.5■■□□□ 1.03
COL6A2-205ENST00000413758 CWF19L2Q2TBE0 894 aaKnown RBP21.5■■□□□ 1.03
COL6A2-205ENST00000413758 DCAF8Q5TAQ9 597 aa21.5■■□□□ 1.03
COL6A2-205ENST00000413758 POLLQ9UGP5 575 aa21.5■■□□□ 1.03
COL6A2-205ENST00000413758 LTBP1Q14766 1721 aa21.49■■□□□ 1.03
COL6A2-205ENST00000413758 ANKRD18AQ8IVF6 992 aa21.49■■□□□ 1.03
COL6A2-205ENST00000413758 GPR101Q96P66 508 aaPredicted RBP21.49■■□□□ 1.03
COL6A2-205ENST00000413758 MYH16Q9H6N6 1097 aa21.49■■□□□ 1.03
COL6A2-205ENST00000413758 DBNDD1Q9H9R9 158 aa21.49■■□□□ 1.03
COL6A2-205ENST00000413758 ADARB2Q9NS39 739 aaKnown RBP21.49■■□□□ 1.03
COL6A2-205ENST00000413758 CDHR2Q9BYE9 1310 aa21.49■■□□□ 1.03
COL6A2-205ENST00000413758 DUOX1Q9NRD9 1551 aa21.48■■□□□ 1.03
COL6A2-205ENST00000413758 ADAMTSL1Q8N6G6 1762 aa21.48■■□□□ 1.03
COL6A2-205ENST00000413758 COL4A1P02462 1669 aa21.48■■□□□ 1.03
COL6A2-205ENST00000413758 NEURL1BA8MQ27 555 aa21.48■■□□□ 1.03
COL6A2-205ENST00000413758 UFL1O94874 794 aa21.48■■□□□ 1.03
COL6A2-205ENST00000413758 CTSWP56202 376 aa21.48■■□□□ 1.03
COL6A2-205ENST00000413758 DOK7Q18PE1 504 aa21.48■■□□□ 1.03
COL6A2-205ENST00000413758 TBC1D16Q8TBP0 767 aa21.48■■□□□ 1.03
COL6A2-205ENST00000413758 YDJCA8MPS7 323 aa21.47■■□□□ 1.03
COL6A2-205ENST00000413758 VAMP4O75379 141 aa21.47■■□□□ 1.03
COL6A2-205ENST00000413758 ZC3H12CQ9C0D7 883 aaKnown RBP21.47■■□□□ 1.03
COL6A2-205ENST00000413758 GGA1Q9UJY5 639 aa21.47■■□□□ 1.03
COL6A2-205ENST00000413758 ECE2O60344 883 aa21.46■■□□□ 1.03
COL6A2-205ENST00000413758 UBE3BQ7Z3V4 1068 aa21.46■■□□□ 1.03
COL6A2-205ENST00000413758 DNAAF4Q8WXU2 420 aa21.46■■□□□ 1.03
COL6A2-205ENST00000413758 CDC5LQ99459 802 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms