RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 MVPQ14764 893 aaKnown RBP16.53■□□□□ 0.24
SF1-206ENST00000413725 SF3B3Q15393 1217 aaKnown RBP16.53■□□□□ 0.24
SF1-206ENST00000413725 CCDC152Q4G0S7 254 aa16.53■□□□□ 0.24
SF1-206ENST00000413725 STYK1Q6J9G0 422 aa16.53■□□□□ 0.24
SF1-206ENST00000413725 C3orf67Q6ZVT6 689 aa16.53■□□□□ 0.24
SF1-206ENST00000413725 ZNF622Q969S3 477 aaKnown RBP eCLIP16.53■□□□□ 0.242e-17■□□□□ 10.4
SF1-206ENST00000413725 CNKSR1Q969H4 720 aa16.52■□□□□ 0.24
SF1-206ENST00000413725 RBM17Q96I25 401 aaKnown RBP16.52■□□□□ 0.24
SF1-206ENST00000413725 MEIS3Q99687 375 aa16.52■□□□□ 0.24
SF1-206ENST00000413725 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.24
SF1-206ENST00000413725 PIM2Q9P1W9 311 aa16.52■□□□□ 0.24
SF1-206ENST00000413725 DDX19BQ9UMR2 479 aa16.52■□□□□ 0.24
SF1-206ENST00000413725 COG6Q9Y2V7 657 aa16.52■□□□□ 0.24
SF1-206ENST00000413725 SUPT16HQ9Y5B9 1047 aaKnown RBP16.52■□□□□ 0.24
SF1-206ENST00000413725 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
SF1-206ENST00000413725 SUCLG2Q96I99 432 aa16.51■□□□□ 0.23
SF1-206ENST00000413725 KCNA3P22001 575 aa16.5■□□□□ 0.23
SF1-206ENST00000413725 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
SF1-206ENST00000413725 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
SF1-206ENST00000413725 C20orf194Q5TEA3 1177 aa16.5■□□□□ 0.23
SF1-206ENST00000413725 TTLL6Q8N841 843 aa16.5■□□□□ 0.23
SF1-206ENST00000413725 TTLL11Q8NHH1 800 aa16.5■□□□□ 0.23
SF1-206ENST00000413725 RTL9Q8NET4 1388 aa16.5■□□□□ 0.23
SF1-206ENST00000413725 GNAI2P04899 355 aa16.49■□□□□ 0.23
SF1-206ENST00000413725 FOXO4P98177 505 aa16.49■□□□□ 0.23
SF1-206ENST00000413725 CCDC88AQ3V6T2 1871 aa16.49■□□□□ 0.23
SF1-206ENST00000413725 DALRD3Q5D0E6 543 aaKnown RBP16.49■□□□□ 0.23
SF1-206ENST00000413725 CRAMP1Q96RY5 1269 aa16.49■□□□□ 0.23
SF1-206ENST00000413725 BICC1Q9H694 974 aaKnown RBP16.49■□□□□ 0.23
SF1-206ENST00000413725 CHMP3Q9Y3E7 222 aa16.49■□□□□ 0.23
SF1-206ENST00000413725 ZBTB7BO15156 539 aaPredicted RBP16.48■□□□□ 0.23
SF1-206ENST00000413725 CSF1RP07333 972 aa16.48■□□□□ 0.23
SF1-206ENST00000413725 EPHA10Q5JZY3 1008 aa16.48■□□□□ 0.23
SF1-206ENST00000413725 LMBR1LQ6UX01 489 aa16.48■□□□□ 0.23
SF1-206ENST00000413725 KAZALD1Q96I82 304 aa16.48■□□□□ 0.23
SF1-206ENST00000413725 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
SF1-206ENST00000413725 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
SF1-206ENST00000413725 FER1L6Q2WGJ9 1857 aa16.48■□□□□ 0.23
SF1-206ENST00000413725 GRAPQ13588 217 aa16.47■□□□□ 0.23
SF1-206ENST00000413725 FAM161AQ3B820 660 aa16.47■□□□□ 0.23
SF1-206ENST00000413725 RABL6Q3YEC7 729 aaPredicted RBP16.47■□□□□ 0.23
SF1-206ENST00000413725 PRPF40BQ6NWY9 871 aaKnown RBP16.47■□□□□ 0.23
SF1-206ENST00000413725 GRAPLQ8TC17 118 aaPredicted RBP16.47■□□□□ 0.23
SF1-206ENST00000413725 CDC5LQ99459 802 aaKnown RBP16.47■□□□□ 0.23
SF1-206ENST00000413725 GREM2Q9H772 168 aa16.47■□□□□ 0.23
SF1-206ENST00000413725 WWC3Q9ULE0 1092 aa16.47■□□□□ 0.23
SF1-206ENST00000413725 BCS1LQ9Y276 419 aa16.47■□□□□ 0.23
SF1-206ENST00000413725 LRRC37AA6NMS7 1700 aa16.47■□□□□ 0.23
SF1-206ENST00000413725 A0A1B0GUL6 1792 aa16.46■□□□□ 0.23
SF1-206ENST00000413725 ANKRD18BA2A2Z9 1011 aa16.46■□□□□ 0.23
SF1-206ENST00000413725 IFIT5Q13325 482 aaKnown RBP16.46■□□□□ 0.23
SF1-206ENST00000413725 CCDC57Q2TAC2 916 aa16.46■□□□□ 0.23
SF1-206ENST00000413725 PELP1Q8IZL8 1130 aaKnown RBP16.46■□□□□ 0.23
SF1-206ENST00000413725 GOLGB1Q14789 3259 aaKnown RBP16.46■□□□□ 0.22
SF1-206ENST00000413725 CHD4Q14839 1912 aa16.45■□□□□ 0.22
SF1-206ENST00000413725 BBOX1O75936 387 aa16.45■□□□□ 0.22
SF1-206ENST00000413725 ITGA6P23229 1130 aa16.45■□□□□ 0.22
SF1-206ENST00000413725 TMC4Q7Z404 712 aa16.45■□□□□ 0.22
SF1-206ENST00000413725 ANKRD18AQ8IVF6 992 aa16.45■□□□□ 0.22
SF1-206ENST00000413725 ANKRD44Q8N8A2 993 aa16.45■□□□□ 0.22
SF1-206ENST00000413725 TMX4Q9H1E5 349 aaPredicted RBP16.45■□□□□ 0.22
SF1-206ENST00000413725 SEC31BQ9NQW1 1179 aa16.45■□□□□ 0.22
SF1-206ENST00000413725 SBF1O95248 1867 aa16.44■□□□□ 0.22
SF1-206ENST00000413725 COL4A1P02462 1669 aa16.44■□□□□ 0.22
SF1-206ENST00000413725 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
SF1-206ENST00000413725 PPEF1O14829 653 aaPredicted RBP16.44■□□□□ 0.22
SF1-206ENST00000413725 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
SF1-206ENST00000413725 GPR162Q16538 588 aa16.44■□□□□ 0.22
SF1-206ENST00000413725 TAF7LQ5H9L4 462 aa16.44■□□□□ 0.22
SF1-206ENST00000413725 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
SF1-206ENST00000413725 SOGA3Q5TF21 947 aa16.43■□□□□ 0.22
SF1-206ENST00000413725 CELF1Q92879 486 aaKnown RBP16.43■□□□□ 0.22
SF1-206ENST00000413725 CRBNQ96SW2 442 aa16.43■□□□□ 0.22
SF1-206ENST00000413725 C1orf115Q9H7X2 142 aa16.43■□□□□ 0.22
SF1-206ENST00000413725 ZBTB40Q9NUA8 1239 aa16.43■□□□□ 0.22
SF1-206ENST00000413725 MPHOSPH8Q99549 860 aa16.42■□□□□ 0.22
SF1-206ENST00000413725 DICER1Q9UPY3 1922 aaKnown RBP16.42■□□□□ 0.22
SF1-206ENST00000413725 C21orf2O43822 256 aa16.41■□□□□ 0.22
SF1-206ENST00000413725 MTX1Q13505 466 aa16.41■□□□□ 0.22
SF1-206ENST00000413725 CC2D2BQ6DHV5 1058 aa16.41■□□□□ 0.22
SF1-206ENST00000413725 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
SF1-206ENST00000413725 ATP6V0A2Q9Y487 856 aa16.41■□□□□ 0.22
SF1-206ENST00000413725 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
SF1-206ENST00000413725 GRIN3BO60391 1043 aa16.4■□□□□ 0.22
SF1-206ENST00000413725 YBX3P16989 372 aaKnown RBP eCLIP16.4■□□□□ 0.228e-20■■■□□ 19.1
SF1-206ENST00000413725 GRIPAP1Q4V328 841 aa16.4■□□□□ 0.22
SF1-206ENST00000413725 CCDC93Q567U6 631 aa16.4■□□□□ 0.22
SF1-206ENST00000413725 SP8Q8IXZ3 490 aa16.4■□□□□ 0.22
SF1-206ENST00000413725 BSDC1Q9NW68 430 aaPredicted RBP16.4■□□□□ 0.22
SF1-206ENST00000413725 LTBP1Q14766 1721 aa16.39■□□□□ 0.21
SF1-206ENST00000413725 ATP8B2P98198 1209 aa16.39■□□□□ 0.21
SF1-206ENST00000413725 AAMPQ13685 434 aa16.39■□□□□ 0.21
SF1-206ENST00000413725 C7orf43Q8WVR3 580 aa16.39■□□□□ 0.21
SF1-206ENST00000413725 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
SF1-206ENST00000413725 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
SF1-206ENST00000413725 RTKN2Q8IZC4 609 aa16.38■□□□□ 0.21
SF1-206ENST00000413725 ZNF594Q96JF6 807 aaPredicted RBP16.38■□□□□ 0.21
SF1-206ENST00000413725 CNNM1Q9NRU3 951 aa16.38■□□□□ 0.21
SF1-206ENST00000413725 HMMRO75330 724 aa16.37■□□□□ 0.21
SF1-206ENST00000413725 RFX5P48382 616 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms