RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 GRAPQ13588 217 aa12.83□□□□□ -0.36
TMEM248-202ENST00000413593 GCKRQ14397 625 aa12.83□□□□□ -0.36
TMEM248-202ENST00000413593 ALDH1L2Q3SY69 923 aa12.83□□□□□ -0.36
TMEM248-202ENST00000413593 BEND3Q5T5X7 828 aa12.83□□□□□ -0.36
TMEM248-202ENST00000413593 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
TMEM248-202ENST00000413593 SLC51AQ86UW1 340 aa12.83□□□□□ -0.36
TMEM248-202ENST00000413593 GRAPLQ8TC17 118 aaPredicted RBP12.83□□□□□ -0.36
TMEM248-202ENST00000413593 ZC3H4Q9UPT8 1303 aaKnown RBP12.83□□□□□ -0.36
TMEM248-202ENST00000413593 H7C1W4 665 aa12.82□□□□□ -0.36
TMEM248-202ENST00000413593 PDE8AO60658 829 aa12.82□□□□□ -0.36
TMEM248-202ENST00000413593 UBE3BQ7Z3V4 1068 aa12.82□□□□□ -0.36
TMEM248-202ENST00000413593 ZNF526Q8TF50 670 aaPredicted RBP12.82□□□□□ -0.36
TMEM248-202ENST00000413593 BCL2L13Q9BXK5 485 aa12.82□□□□□ -0.36
TMEM248-202ENST00000413593 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
TMEM248-202ENST00000413593 CASP7P55210 303 aa12.81□□□□□ -0.36
TMEM248-202ENST00000413593 GRIPAP1Q4V328 841 aa12.81□□□□□ -0.36
TMEM248-202ENST00000413593 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
TMEM248-202ENST00000413593 PSMD1Q99460 953 aa12.81□□□□□ -0.36
TMEM248-202ENST00000413593 GPBP1L1Q9HC44 474 aaPredicted RBP12.81□□□□□ -0.36
TMEM248-202ENST00000413593 SMC4Q9NTJ3 1288 aa12.81□□□□□ -0.36
TMEM248-202ENST00000413593 PTPRCP08575 1304 aa12.81□□□□□ -0.36
TMEM248-202ENST00000413593 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
TMEM248-202ENST00000413593 CCDC152Q4G0S7 254 aa12.8□□□□□ -0.36
TMEM248-202ENST00000413593 TMC4Q7Z404 712 aa12.8□□□□□ -0.36
TMEM248-202ENST00000413593 SP8Q8IXZ3 490 aa12.8□□□□□ -0.36
TMEM248-202ENST00000413593 ZNF277Q9NRM2 450 aaPredicted RBP12.8□□□□□ -0.36
TMEM248-202ENST00000413593 ZBED9Q6R2W3 1325 aa12.8□□□□□ -0.36
TMEM248-202ENST00000413593 FER1L6Q2WGJ9 1857 aa12.79□□□□□ -0.36
TMEM248-202ENST00000413593 ALDH1L1O75891 902 aa12.79□□□□□ -0.36
TMEM248-202ENST00000413593 CTSWP56202 376 aa12.79□□□□□ -0.36
TMEM248-202ENST00000413593 SLC4A10Q6U841 1118 aa12.79□□□□□ -0.36
TMEM248-202ENST00000413593 TTLL11Q8NHH1 800 aa12.79□□□□□ -0.36
TMEM248-202ENST00000413593 CCDC85AQ96PX6 553 aaPredicted RBP12.79□□□□□ -0.36
TMEM248-202ENST00000413593 PLA2G12BQ9BX93 195 aa12.79□□□□□ -0.36
TMEM248-202ENST00000413593 SRCIN1Q9C0H9 1055 aa12.79□□□□□ -0.36
TMEM248-202ENST00000413593 TMX4Q9H1E5 349 aaPredicted RBP12.79□□□□□ -0.36
TMEM248-202ENST00000413593 SEC31BQ9NQW1 1179 aa12.79□□□□□ -0.36
TMEM248-202ENST00000413593 LAMB2P55268 1798 aa12.79□□□□□ -0.36
TMEM248-202ENST00000413593 IARSP41252 1262 aaKnown RBP12.78□□□□□ -0.36
TMEM248-202ENST00000413593 RARSP54136 660 aaKnown RBP12.78□□□□□ -0.36
TMEM248-202ENST00000413593 BRPF1P55201 1214 aaPredicted RBP12.78□□□□□ -0.36
TMEM248-202ENST00000413593 RPS8P62241 208 aaKnown RBP12.78□□□□□ -0.36
TMEM248-202ENST00000413593 CACNA1SQ13698 1873 aa12.78□□□□□ -0.36
TMEM248-202ENST00000413593 COL4A1P02462 1669 aa12.77□□□□□ -0.36
TMEM248-202ENST00000413593 GLTPD2A6NH11 291 aa12.77□□□□□ -0.37
TMEM248-202ENST00000413593 DPP8Q6V1X1 898 aaPredicted RBP12.77□□□□□ -0.37
TMEM248-202ENST00000413593 MPNDQ8N594 471 aa12.77□□□□□ -0.37
TMEM248-202ENST00000413593 RTFDC1Q9BY42 306 aaPredicted RBP12.77□□□□□ -0.37
TMEM248-202ENST00000413593 NMRK2Q9NPI5 230 aa12.77□□□□□ -0.37
TMEM248-202ENST00000413593 CACNA1FO60840 1977 aa12.77□□□□□ -0.37
TMEM248-202ENST00000413593 KDM2BQ8NHM5 1336 aa12.77□□□□□ -0.37
TMEM248-202ENST00000413593 RTL9Q8NET4 1388 aa12.77□□□□□ -0.37
TMEM248-202ENST00000413593 SBF1O95248 1867 aa12.76□□□□□ -0.37
TMEM248-202ENST00000413593 GRM8O00222 908 aa12.76□□□□□ -0.37
TMEM248-202ENST00000413593 KIF3CO14782 793 aa12.76□□□□□ -0.37
TMEM248-202ENST00000413593 GREM2Q9H772 168 aa12.76□□□□□ -0.37
TMEM248-202ENST00000413593 CSF1RP07333 972 aa12.75□□□□□ -0.37
TMEM248-202ENST00000413593 ANKRD18AQ8IVF6 992 aa12.75□□□□□ -0.37
TMEM248-202ENST00000413593 SUPT20HQ8NEM7 779 aa12.75□□□□□ -0.37
TMEM248-202ENST00000413593 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
TMEM248-202ENST00000413593 C9orf78Q9NZ63 289 aaPredicted RBP12.75□□□□□ -0.37
TMEM248-202ENST00000413593 NOB1Q9ULX3 412 aaKnown RBP12.75□□□□□ -0.37
TMEM248-202ENST00000413593 FZD9O00144 591 aa12.74□□□□□ -0.37
TMEM248-202ENST00000413593 PPIP5K2O43314 1243 aa12.74□□□□□ -0.37
TMEM248-202ENST00000413593 NBPF7P0C2Y1 421 aaPredicted RBP12.74□□□□□ -0.37
TMEM248-202ENST00000413593 GPSM2P81274 684 aa12.74□□□□□ -0.37
TMEM248-202ENST00000413593 FOXO4P98177 505 aa12.74□□□□□ -0.37
TMEM248-202ENST00000413593 FAM161AQ3B820 660 aa12.74□□□□□ -0.37
TMEM248-202ENST00000413593 DPY19L2Q6NUT2 758 aa12.74□□□□□ -0.37
TMEM248-202ENST00000413593 LARGE2Q8N3Y3 721 aa12.74□□□□□ -0.37
TMEM248-202ENST00000413593 JDP2Q8WYK2 163 aa12.74□□□□□ -0.37
TMEM248-202ENST00000413593 API5Q9BZZ5 524 aaKnown RBP12.74□□□□□ -0.37
TMEM248-202ENST00000413593 VPS33BQ9H267 617 aa12.74□□□□□ -0.37
TMEM248-202ENST00000413593 NSFL1CQ9UNZ2 370 aaKnown RBP12.74□□□□□ -0.37
TMEM248-202ENST00000413593 TIAM2Q8IVF5 1701 aa12.74□□□□□ -0.37
TMEM248-202ENST00000413593 COL4A5P29400 1685 aa12.73□□□□□ -0.37
TMEM248-202ENST00000413593 UTYO14607 1347 aa12.73□□□□□ -0.37
TMEM248-202ENST00000413593 KIF16BQ96L93 1317 aa12.73□□□□□ -0.37
TMEM248-202ENST00000413593 ZNF541Q9H0D2 1346 aa12.73□□□□□ -0.37
TMEM248-202ENST00000413593 ITGA6P23229 1130 aa12.73□□□□□ -0.37
TMEM248-202ENST00000413593 KIAA2012Q0VF49 1180 aa12.73□□□□□ -0.37
TMEM248-202ENST00000413593 AOC3Q16853 763 aa12.73□□□□□ -0.37
TMEM248-202ENST00000413593 EPHA10Q5JZY3 1008 aa12.73□□□□□ -0.37
TMEM248-202ENST00000413593 LRRC37AA6NMS7 1700 aa12.73□□□□□ -0.37
TMEM248-202ENST00000413593 DUOX1Q9NRD9 1551 aa12.73□□□□□ -0.37
TMEM248-202ENST00000413593 BCAR3O75815 825 aa12.72□□□□□ -0.37
TMEM248-202ENST00000413593 DDNO94850 711 aaPredicted RBP12.72□□□□□ -0.37
TMEM248-202ENST00000413593 LMBR1LQ6UX01 489 aa12.72□□□□□ -0.37
TMEM248-202ENST00000413593 NIM1KQ8IY84 436 aa12.72□□□□□ -0.37
TMEM248-202ENST00000413593 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
TMEM248-202ENST00000413593 SUCLG2Q96I99 432 aa12.72□□□□□ -0.37
TMEM248-202ENST00000413593 RRAGCQ9HB90 399 aa12.72□□□□□ -0.37
TMEM248-202ENST00000413593 BSDC1Q9NW68 430 aaPredicted RBP12.72□□□□□ -0.37
TMEM248-202ENST00000413593 PODXL2Q9NZ53 605 aa12.72□□□□□ -0.37
TMEM248-202ENST00000413593 POLLQ9UGP5 575 aa12.72□□□□□ -0.37
TMEM248-202ENST00000413593 C6orf229H3BNL8 230 aa12.71□□□□□ -0.37
TMEM248-202ENST00000413593 IGHMBP2P38935 993 aaKnown RBP12.71□□□□□ -0.37
TMEM248-202ENST00000413593 CCT4P50991 539 aaKnown RBP12.71□□□□□ -0.37
TMEM248-202ENST00000413593 C1QTNF8P60827 252 aa12.71□□□□□ -0.37
TMEM248-202ENST00000413593 TBC1D16Q8TBP0 767 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms