RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 R3HDM1Q15032 1099 aaKnown RBP13.2□□□□□ -0.3
SMARCAL1-204ENST00000412913 SLC10A5Q5PT55 438 aa13.2□□□□□ -0.3
SMARCAL1-204ENST00000412913 BRCA1P38398 1863 aaKnown RBP13.2□□□□□ -0.3
SMARCAL1-204ENST00000412913 SRGAP3O43295 1099 aa13.19□□□□□ -0.3
SMARCAL1-204ENST00000412913 HCLS1P14317 486 aaPredicted RBP13.19□□□□□ -0.3
SMARCAL1-204ENST00000412913 FAM161AQ3B820 660 aa13.19□□□□□ -0.3
SMARCAL1-204ENST00000412913 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
SMARCAL1-204ENST00000412913 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
SMARCAL1-204ENST00000412913 CNBD1Q8NA66 436 aa13.19□□□□□ -0.3
SMARCAL1-204ENST00000412913 TTLL11Q8NHH1 800 aa13.19□□□□□ -0.3
SMARCAL1-204ENST00000412913 SLC16A10Q8TF71 515 aa13.19□□□□□ -0.3
SMARCAL1-204ENST00000412913 HDAC5Q9UQL6 1122 aa13.19□□□□□ -0.3
SMARCAL1-204ENST00000412913 TPTE2Q6XPS3 522 aa13.18□□□□□ -0.3
SMARCAL1-204ENST00000412913 SMC5Q8IY18 1101 aa13.18□□□□□ -0.3
SMARCAL1-204ENST00000412913 LTBP1Q14766 1721 aa13.18□□□□□ -0.3
SMARCAL1-204ENST00000412913 PSDA5PKW4 1024 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-204ENST00000412913 CENPQQ7L2Z9 268 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-204ENST00000412913 RWDD1Q9H446 243 aaPredicted RBP13.17□□□□□ -0.3
SMARCAL1-204ENST00000412913 GREM2Q9H772 168 aa13.17□□□□□ -0.3
SMARCAL1-204ENST00000412913 HMMRO75330 724 aa13.16□□□□□ -0.3
SMARCAL1-204ENST00000412913 PTPN12Q05209 780 aaKnown RBP13.16□□□□□ -0.3
SMARCAL1-204ENST00000412913 SF3B3Q15393 1217 aaKnown RBP13.16□□□□□ -0.3
SMARCAL1-204ENST00000412913 CRY2Q49AN0 593 aa13.16□□□□□ -0.3
SMARCAL1-204ENST00000412913 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
SMARCAL1-204ENST00000412913 SGIP1Q9BQI5 828 aa13.16□□□□□ -0.3
SMARCAL1-204ENST00000412913 MTFR1LQ9H019 292 aa13.16□□□□□ -0.3
SMARCAL1-204ENST00000412913 DCTPP1Q9H773 170 aa13.16□□□□□ -0.3
SMARCAL1-204ENST00000412913 PA2G4Q9UQ80 394 aaKnown RBP13.16□□□□□ -0.3
SMARCAL1-204ENST00000412913 PARP3Q9Y6F1 533 aa13.16□□□□□ -0.3
SMARCAL1-204ENST00000412913 ZBTB7AO95365 584 aa13.15□□□□□ -0.3
SMARCAL1-204ENST00000412913 ST5P78524 1137 aa13.15□□□□□ -0.3
SMARCAL1-204ENST00000412913 CCDC85AQ96PX6 553 aaPredicted RBP13.15□□□□□ -0.3
SMARCAL1-204ENST00000412913 COPRSQ9NQ92 184 aa13.15□□□□□ -0.3
SMARCAL1-204ENST00000412913 NOP58Q9Y2X3 529 aaKnown RBP13.15□□□□□ -0.3
SMARCAL1-204ENST00000412913 KLRG2A4D1S0 409 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-204ENST00000412913 ITGA6P23229 1130 aa13.14□□□□□ -0.31
SMARCAL1-204ENST00000412913 GCC1Q96CN9 775 aa13.14□□□□□ -0.31
SMARCAL1-204ENST00000412913 SEC31BQ9NQW1 1179 aa13.14□□□□□ -0.31
SMARCAL1-204ENST00000412913 EXOC6BQ9Y2D4 811 aa13.14□□□□□ -0.31
SMARCAL1-204ENST00000412913 CHMP3Q9Y3E7 222 aa13.14□□□□□ -0.31
SMARCAL1-204ENST00000412913 HSP90B1P14625 803 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-204ENST00000412913 GTF2E1P29083 439 aaPredicted RBP13.13□□□□□ -0.31
SMARCAL1-204ENST00000412913 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
SMARCAL1-204ENST00000412913 ZNF594Q96JF6 807 aaPredicted RBP13.13□□□□□ -0.31
SMARCAL1-204ENST00000412913 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.13□□□□□ -0.31
SMARCAL1-204ENST00000412913 ZNF609O15014 1411 aa13.13□□□□□ -0.31
SMARCAL1-204ENST00000412913 SLX4Q8IY92 1834 aa13.12□□□□□ -0.31
SMARCAL1-204ENST00000412913 PTGER2P43116 358 aa13.12□□□□□ -0.31
SMARCAL1-204ENST00000412913 IFIT5Q13325 482 aaKnown RBP13.12□□□□□ -0.31
SMARCAL1-204ENST00000412913 ATG9AQ7Z3C6 839 aa13.12□□□□□ -0.31
SMARCAL1-204ENST00000412913 POTEDQ86YR6 584 aa13.12□□□□□ -0.31
SMARCAL1-204ENST00000412913 NLRP3Q96P20 1036 aa13.12□□□□□ -0.31
SMARCAL1-204ENST00000412913 DUOX1Q9NRD9 1551 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 NPHP1O15259 732 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 SURF6O75683 361 aaKnown RBP13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 SASH1O94885 1247 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 NUCB1Q02818 461 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 CCDC57Q2TAC2 916 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 LRRC24Q50LG9 513 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 SLC51AQ86UW1 340 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 SKAP1Q86WV1 359 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 CELF1Q92879 486 aaKnown RBP13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 PUS3Q9BZE2 481 aaKnown RBP13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 SIL1Q9H173 461 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
SMARCAL1-204ENST00000412913 EYA2O00167 538 aa13.1□□□□□ -0.31
SMARCAL1-204ENST00000412913 CIAO1O76071 339 aa13.1□□□□□ -0.31
SMARCAL1-204ENST00000412913 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
SMARCAL1-204ENST00000412913 SALL3Q9BXA9 1300 aa13.1□□□□□ -0.31
SMARCAL1-204ENST00000412913 RAB11FIP3O75154 756 aa13.09□□□□□ -0.31
SMARCAL1-204ENST00000412913 PDE4AP27815 886 aa13.09□□□□□ -0.31
SMARCAL1-204ENST00000412913 HOXA10P31260 410 aaPredicted RBP13.09□□□□□ -0.31
SMARCAL1-204ENST00000412913 VGLL2Q8N8G2 317 aa13.09□□□□□ -0.31
SMARCAL1-204ENST00000412913 RHPN1Q8TCX5 695 aa13.09□□□□□ -0.31
SMARCAL1-204ENST00000412913 SNED1Q8TER0 1413 aa13.09□□□□□ -0.31
SMARCAL1-204ENST00000412913 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
SMARCAL1-204ENST00000412913 SOCS7O14512 581 aa13.08□□□□□ -0.32
SMARCAL1-204ENST00000412913 SMARCA5O60264 1052 aaPredicted RBP13.08□□□□□ -0.32
SMARCAL1-204ENST00000412913 SRGNP10124 158 aa13.08□□□□□ -0.32
SMARCAL1-204ENST00000412913 PDE6BP35913 854 aa13.08□□□□□ -0.32
SMARCAL1-204ENST00000412913 GRAPQ13588 217 aa13.08□□□□□ -0.32
SMARCAL1-204ENST00000412913 HSP90AB4PQ58FF6 505 aa13.08□□□□□ -0.32
SMARCAL1-204ENST00000412913 CHD1LQ86WJ1 897 aa13.08□□□□□ -0.32
SMARCAL1-204ENST00000412913 GRAPLQ8TC17 118 aaPredicted RBP13.08□□□□□ -0.32
SMARCAL1-204ENST00000412913 CDC5LQ99459 802 aaKnown RBP13.08□□□□□ -0.32
SMARCAL1-204ENST00000412913 RIPOR2Q9Y4F9 1068 aa13.08□□□□□ -0.32
SMARCAL1-204ENST00000412913 ARFGEF1Q9Y6D6 1849 aa13.08□□□□□ -0.32
SMARCAL1-204ENST00000412913 APBB1O00213 710 aa13.07□□□□□ -0.32
SMARCAL1-204ENST00000412913 IL15P40933 162 aaPredicted RBP13.07□□□□□ -0.32
SMARCAL1-204ENST00000412913 ERC1Q8IUD2 1116 aa13.07□□□□□ -0.32
SMARCAL1-204ENST00000412913 KIF1BPQ96EK5 621 aa13.07□□□□□ -0.32
SMARCAL1-204ENST00000412913 LRRCC1Q9C099 1032 aa13.07□□□□□ -0.32
SMARCAL1-204ENST00000412913 LNPKQ9C0E8 428 aa13.07□□□□□ -0.32
SMARCAL1-204ENST00000412913 MYH13Q9UKX3 1938 aa13.07□□□□□ -0.32
SMARCAL1-204ENST00000412913 ZNF646O15015 1829 aaPredicted RBP13.06□□□□□ -0.32
SMARCAL1-204ENST00000412913 NPR1P16066 1061 aa13.06□□□□□ -0.32
SMARCAL1-204ENST00000412913 POLD1P28340 1107 aa13.06□□□□□ -0.32
SMARCAL1-204ENST00000412913 IGHMBP2P38935 993 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms