RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 PRKRIP1Q9H875 184 aaPredicted RBP24.3■■□□□ 1.48
ITGA6-204ENST00000412899 WBP1LQ9NX94 342 aa24.3■■□□□ 1.48
ITGA6-204ENST00000412899 GPRC5DQ9NZD1 345 aa24.3■■□□□ 1.48
ITGA6-204ENST00000412899 FMR1Q06787 632 aaKnown RBP eCLIP24.29■■□□□ 1.48
ITGA6-204ENST00000412899 GRAPQ13588 217 aa24.29■■□□□ 1.48
ITGA6-204ENST00000412899 GRAPLQ8TC17 118 aaPredicted RBP24.29■■□□□ 1.48
ITGA6-204ENST00000412899 ADARB2Q9NS39 739 aaKnown RBP24.29■■□□□ 1.48
ITGA6-204ENST00000412899 WDR33Q9C0J8 1336 aaKnown RBP24.29■■□□□ 1.48
ITGA6-204ENST00000412899 PAXIP1Q6ZW49 1069 aaPredicted RBP24.28■■□□□ 1.48
ITGA6-204ENST00000412899 PLBD2Q8NHP8 589 aa24.28■■□□□ 1.48
ITGA6-204ENST00000412899 LAMB2P55268 1798 aa24.28■■□□□ 1.48
ITGA6-204ENST00000412899 HOXB7P09629 217 aa24.27■■□□□ 1.48
ITGA6-204ENST00000412899 KIAA2012Q0VF49 1180 aa24.27■■□□□ 1.48
ITGA6-204ENST00000412899 CIAPIN1Q6FI81 312 aa24.27■■□□□ 1.48
ITGA6-204ENST00000412899 ANKRD13DQ6ZTN6 518 aa24.27■■□□□ 1.48
ITGA6-204ENST00000412899 DBF4Q9UBU7 674 aaPredicted RBP24.27■■□□□ 1.48
ITGA6-204ENST00000412899 TRAF5O00463 557 aa24.26■■□□□ 1.47
ITGA6-204ENST00000412899 GMPSP49915 693 aaPredicted RBP24.26■■□□□ 1.47
ITGA6-204ENST00000412899 MAP2K1Q02750 393 aaPredicted RBP24.26■■□□□ 1.47
ITGA6-204ENST00000412899 TMC4Q7Z404 712 aa24.26■■□□□ 1.47
ITGA6-204ENST00000412899 BCL2L13Q9BXK5 485 aa24.26■■□□□ 1.47
ITGA6-204ENST00000412899 ADAMTS8Q9UP79 889 aa24.26■■□□□ 1.47
ITGA6-204ENST00000412899 LBX1P52954 281 aa24.25■■□□□ 1.47
ITGA6-204ENST00000412899 TNIP1Q15025 636 aa24.25■■□□□ 1.47
ITGA6-204ENST00000412899 RAD17O75943 681 aa24.24■■□□□ 1.47
ITGA6-204ENST00000412899 ECE1P42892 770 aa24.24■■□□□ 1.47
ITGA6-204ENST00000412899 GRM1Q13255 1194 aa24.24■■□□□ 1.47
ITGA6-204ENST00000412899 CFAP44Q96MT7 982 aa24.24■■□□□ 1.47
ITGA6-204ENST00000412899 ATP5J2-PTCD1G3V325 749 aa24.23■■□□□ 1.47
ITGA6-204ENST00000412899 DUSP27Q5VZP5 1158 aa24.23■■□□□ 1.47
ITGA6-204ENST00000412899 CST9Q5W186 159 aa24.23■■□□□ 1.47
ITGA6-204ENST00000412899 FAM89AQ96GI7 184 aa24.23■■□□□ 1.47
ITGA6-204ENST00000412899 CAPNS2Q96L46 248 aa24.23■■□□□ 1.47
ITGA6-204ENST00000412899 ISCA1Q9BUE6 129 aa24.23■■□□□ 1.47
ITGA6-204ENST00000412899 HYPKQ9NX55 129 aa24.23■■□□□ 1.47
ITGA6-204ENST00000412899 CDHR2Q9BYE9 1310 aa24.22■■□□□ 1.47
ITGA6-204ENST00000412899 NSFL1CQ9UNZ2 370 aaKnown RBP24.21■■□□□ 1.47
ITGA6-204ENST00000412899 SF3B3Q15393 1217 aaKnown RBP24.2■■□□□ 1.46
ITGA6-204ENST00000412899 RTL5Q5HYW3 569 aaPredicted RBP24.2■■□□□ 1.46
ITGA6-204ENST00000412899 CYP4F22Q6NT55 531 aa24.2■■□□□ 1.46
ITGA6-204ENST00000412899 CELF1Q92879 486 aaKnown RBP24.2■■□□□ 1.46
ITGA6-204ENST00000412899 TLL2Q9Y6L7 1015 aa24.2■■□□□ 1.46
ITGA6-204ENST00000412899 TAF1P21675 1872 aa24.19■■□□□ 1.46
ITGA6-204ENST00000412899 HSPA8P11142 646 aaKnown RBP24.19■■□□□ 1.46
ITGA6-204ENST00000412899 WASHC4Q2M389 1173 aa24.19■■□□□ 1.46
ITGA6-204ENST00000412899 GPR101Q96P66 508 aaPredicted RBP24.19■■□□□ 1.46
ITGA6-204ENST00000412899 BEGAINQ9BUH8 593 aa24.19■■□□□ 1.46
ITGA6-204ENST00000412899 GLIS2Q9BZE0 524 aaPredicted RBP24.19■■□□□ 1.46
ITGA6-204ENST00000412899 MBIPQ9NS73 344 aa24.19■■□□□ 1.46
ITGA6-204ENST00000412899 CNOT7Q9UIV1 285 aaKnown RBP24.19■■□□□ 1.46
ITGA6-204ENST00000412899 TRPM7Q96QT4 1865 aa24.18■■□□□ 1.46
ITGA6-204ENST00000412899 YDJCA8MPS7 323 aa24.18■■□□□ 1.46
ITGA6-204ENST00000412899 CELF2O95319 508 aaKnown RBP24.18■■□□□ 1.46
ITGA6-204ENST00000412899 RIC3Q7Z5B4 369 aa24.18■■□□□ 1.46
ITGA6-204ENST00000412899 DDX60Q8IY21 1712 aaKnown RBP24.18■■□□□ 1.46
ITGA6-204ENST00000412899 H7C1D1 291 aa24.17■■□□□ 1.46
ITGA6-204ENST00000412899 ZC3H15Q8WU90 426 aaKnown RBP24.17■■□□□ 1.46
ITGA6-204ENST00000412899 PGAP2Q9UHJ9 254 aa24.17■■□□□ 1.46
ITGA6-204ENST00000412899 DUOX1Q9NRD9 1551 aa24.16■■□□□ 1.46
ITGA6-204ENST00000412899 C6orf229H3BNL8 230 aa24.16■■□□□ 1.46
ITGA6-204ENST00000412899 IRS4O14654 1257 aaPredicted RBP24.16■■□□□ 1.46
ITGA6-204ENST00000412899 RIMBP2O15034 1052 aa24.16■■□□□ 1.46
ITGA6-204ENST00000412899 HIRAP54198 1017 aaPredicted RBP24.16■■□□□ 1.46
ITGA6-204ENST00000412899 GOLGA2Q08379 1002 aa24.16■■□□□ 1.46
ITGA6-204ENST00000412899 TRIM28Q13263 835 aaKnown RBP24.16■■□□□ 1.46
ITGA6-204ENST00000412899 TRPM4Q8TD43 1214 aa24.16■■□□□ 1.46
ITGA6-204ENST00000412899 LRRC37AA6NMS7 1700 aa24.15■■□□□ 1.46
ITGA6-204ENST00000412899 CDC37L1Q7L3B6 337 aa24.15■■□□□ 1.46
ITGA6-204ENST00000412899 SAPCD2Q86UD0 394 aa24.15■■□□□ 1.46
ITGA6-204ENST00000412899 MICALL2Q8IY33 904 aa24.15■■□□□ 1.46
ITGA6-204ENST00000412899 ZNF408Q9H9D4 720 aa24.15■■□□□ 1.46
ITGA6-204ENST00000412899 DBNDD1Q9H9R9 158 aa24.15■■□□□ 1.46
ITGA6-204ENST00000412899 SHTN1A0MZ66 631 aa24.14■■□□□ 1.45
ITGA6-204ENST00000412899 ELL2O00472 640 aaPredicted RBP24.14■■□□□ 1.45
ITGA6-204ENST00000412899 GPSM2P81274 684 aa24.14■■□□□ 1.45
ITGA6-204ENST00000412899 ZBTB12Q9Y330 459 aaPredicted RBP24.14■■□□□ 1.45
ITGA6-204ENST00000412899 PSMD14O00487 310 aa24.13■■□□□ 1.45
ITGA6-204ENST00000412899 APAF1O14727 1248 aa24.13■■□□□ 1.45
ITGA6-204ENST00000412899 ZNF853P0CG23 659 aa24.13■■□□□ 1.45
ITGA6-204ENST00000412899 RPS8P62241 208 aaKnown RBP24.13■■□□□ 1.45
ITGA6-204ENST00000412899 GNAI1P63096 354 aa24.13■■□□□ 1.45
ITGA6-204ENST00000412899 CALD1Q05682 793 aaKnown RBP24.13■■□□□ 1.45
ITGA6-204ENST00000412899 EYA3Q99504 573 aa24.13■■□□□ 1.45
ITGA6-204ENST00000412899 PHAXQ9H814 394 aaKnown RBP24.13■■□□□ 1.45
ITGA6-204ENST00000412899 IFT57Q9NWB7 429 aa24.13■■□□□ 1.45
ITGA6-204ENST00000412899 POLLQ9UGP5 575 aa24.13■■□□□ 1.45
ITGA6-204ENST00000412899 ANP32CO43423 234 aa24.12■■□□□ 1.45
ITGA6-204ENST00000412899 AOC2O75106 756 aa24.12■■□□□ 1.45
ITGA6-204ENST00000412899 HSP90B1P14625 803 aaKnown RBP24.12■■□□□ 1.45
ITGA6-204ENST00000412899 MAP2K2P36507 400 aa24.12■■□□□ 1.45
ITGA6-204ENST00000412899 ZBTB38Q8NAP3 1195 aaPredicted RBP24.12■■□□□ 1.45
ITGA6-204ENST00000412899 DPF2Q92785 391 aa24.12■■□□□ 1.45
ITGA6-204ENST00000412899 THSD7BQ9C0I4 1608 aa24.12■■□□□ 1.45
ITGA6-204ENST00000412899 DOK7Q18PE1 504 aa24.11■■□□□ 1.45
ITGA6-204ENST00000412899 MYD88Q99836 296 aa24.11■■□□□ 1.45
ITGA6-204ENST00000412899 ECE2O60344 883 aa24.1■■□□□ 1.45
ITGA6-204ENST00000412899 SAMD7Q7Z3H4 446 aa24.1■■□□□ 1.45
ITGA6-204ENST00000412899 HHIPL1Q96JK4 782 aa24.1■■□□□ 1.45
ITGA6-204ENST00000412899 USP48Q86UV5 1035 aa24.09■■□□□ 1.45
ITGA6-204ENST00000412899 TBC1D16Q8TBP0 767 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms