RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 SLC4A10Q6U841 1118 aa16.72■□□□□ 0.27
HDAC8-210ENST00000412342 SRCIN1Q9C0H9 1055 aa16.72■□□□□ 0.27
HDAC8-210ENST00000412342 LTBP1Q14766 1721 aa16.72■□□□□ 0.27
HDAC8-210ENST00000412342 KIF16BQ96L93 1317 aa16.71■□□□□ 0.27
HDAC8-210ENST00000412342 LTBP3Q9NS15 1303 aa16.71■□□□□ 0.27
HDAC8-210ENST00000412342 GRAPQ13588 217 aa16.71■□□□□ 0.27
HDAC8-210ENST00000412342 GRAPLQ8TC17 118 aaPredicted RBP16.71■□□□□ 0.27
HDAC8-210ENST00000412342 UTYO14607 1347 aa16.7■□□□□ 0.26
HDAC8-210ENST00000412342 SPEF2Q9C093 1822 aa16.7■□□□□ 0.26
HDAC8-210ENST00000412342 DUOX1Q9NRD9 1551 aa16.7■□□□□ 0.26
HDAC8-210ENST00000412342 RTL9Q8NET4 1388 aa16.7■□□□□ 0.26
HDAC8-210ENST00000412342 GRM8O00222 908 aa16.7■□□□□ 0.26
HDAC8-210ENST00000412342 PPEF1O14829 653 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-210ENST00000412342 HSP90B1P14625 803 aaKnown RBP16.7■□□□□ 0.26
HDAC8-210ENST00000412342 YY1P25490 414 aa16.7■□□□□ 0.26
HDAC8-210ENST00000412342 CTSWP56202 376 aa16.7■□□□□ 0.26
HDAC8-210ENST00000412342 CCDC93Q567U6 631 aa16.7■□□□□ 0.26
HDAC8-210ENST00000412342 SOGA3Q5TF21 947 aa16.7■□□□□ 0.26
HDAC8-210ENST00000412342 DDX46Q7L014 1031 aaKnown RBP16.7■□□□□ 0.26
HDAC8-210ENST00000412342 TTLL11Q8NHH1 800 aa16.7■□□□□ 0.26
HDAC8-210ENST00000412342 ARHGAP45Q92619 1136 aa16.7■□□□□ 0.26
HDAC8-210ENST00000412342 CELF1Q92879 486 aaKnown RBP16.7■□□□□ 0.26
HDAC8-210ENST00000412342 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
HDAC8-210ENST00000412342 SEC31BQ9NQW1 1179 aa16.69■□□□□ 0.26
HDAC8-210ENST00000412342 ATP6V0A2Q9Y487 856 aa16.69■□□□□ 0.26
HDAC8-210ENST00000412342 BBOX1O75936 387 aa16.68■□□□□ 0.26
HDAC8-210ENST00000412342 CSF1RP07333 972 aa16.68■□□□□ 0.26
HDAC8-210ENST00000412342 FOXO4P98177 505 aa16.68■□□□□ 0.26
HDAC8-210ENST00000412342 CCDC152Q4G0S7 254 aa16.68■□□□□ 0.26
HDAC8-210ENST00000412342 CC2D2BQ6DHV5 1058 aa16.68■□□□□ 0.26
HDAC8-210ENST00000412342 KAZALD1Q96I82 304 aa16.68■□□□□ 0.26
HDAC8-210ENST00000412342 TAOK3Q9H2K8 898 aa16.68■□□□□ 0.26
HDAC8-210ENST00000412342 TNNQ9UQP3 1299 aa16.68■□□□□ 0.26
HDAC8-210ENST00000412342 NBPF7P0C2Y1 421 aaPredicted RBP16.67■□□□□ 0.26
HDAC8-210ENST00000412342 TRIM27P14373 513 aa16.67■□□□□ 0.26
HDAC8-210ENST00000412342 EPHA10Q5JZY3 1008 aa16.67■□□□□ 0.26
HDAC8-210ENST00000412342 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
HDAC8-210ENST00000412342 SP8Q8IXZ3 490 aa16.67■□□□□ 0.26
HDAC8-210ENST00000412342 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
HDAC8-210ENST00000412342 GREM2Q9H772 168 aa16.67■□□□□ 0.26
HDAC8-210ENST00000412342 COL4A5P29400 1685 aa16.66■□□□□ 0.26
HDAC8-210ENST00000412342 LMNB1P20700 586 aa16.66■□□□□ 0.26
HDAC8-210ENST00000412342 FKBP4Q02790 459 aaKnown RBP eCLIP16.66■□□□□ 0.26
HDAC8-210ENST00000412342 RTKN2Q8IZC4 609 aa16.66■□□□□ 0.26
HDAC8-210ENST00000412342 USP44Q9H0E7 712 aa16.66■□□□□ 0.26
HDAC8-210ENST00000412342 A0A1B0GUL6 1792 aa16.66■□□□□ 0.26
HDAC8-210ENST00000412342 CCT4P50991 539 aaKnown RBP16.65■□□□□ 0.26
HDAC8-210ENST00000412342 ATF7IPQ6VMQ6 1270 aa16.65■□□□□ 0.26
HDAC8-210ENST00000412342 TMC4Q7Z404 712 aa16.65■□□□□ 0.26
HDAC8-210ENST00000412342 SUCLG2Q96I99 432 aa16.65■□□□□ 0.26
HDAC8-210ENST00000412342 PSMD1Q99460 953 aa16.65■□□□□ 0.26
HDAC8-210ENST00000412342 C9orf78Q9NZ63 289 aaPredicted RBP16.65■□□□□ 0.26
HDAC8-210ENST00000412342 RNF181Q9P0P0 153 aa16.65■□□□□ 0.26
HDAC8-210ENST00000412342 RPS8P62241 208 aaKnown RBP16.64■□□□□ 0.25
HDAC8-210ENST00000412342 FAM161AQ3B820 660 aa16.64■□□□□ 0.25
HDAC8-210ENST00000412342 GRIPAP1Q4V328 841 aa16.64■□□□□ 0.25
HDAC8-210ENST00000412342 INTS3Q68E01 1043 aaKnown RBP16.64■□□□□ 0.25
HDAC8-210ENST00000412342 IPO8O15397 1037 aaKnown RBP16.63■□□□□ 0.25
HDAC8-210ENST00000412342 FRAT1Q92837 279 aaPredicted RBP16.63■□□□□ 0.25
HDAC8-210ENST00000412342 RTFDC1Q9BY42 306 aaPredicted RBP16.63■□□□□ 0.25
HDAC8-210ENST00000412342 RABL6Q3YEC7 729 aaPredicted RBP16.62■□□□□ 0.25
HDAC8-210ENST00000412342 ZKSCAN2Q63HK3 967 aa16.62■□□□□ 0.25
HDAC8-210ENST00000412342 ZNF784Q8NCA9 323 aaPredicted RBP16.62■□□□□ 0.25
HDAC8-210ENST00000412342 ZNF277Q9NRM2 450 aaPredicted RBP16.62■□□□□ 0.25
HDAC8-210ENST00000412342 ZC3H4Q9UPT8 1303 aaKnown RBP16.62■□□□□ 0.25
HDAC8-210ENST00000412342 ITGA6P23229 1130 aa16.61■□□□□ 0.25
HDAC8-210ENST00000412342 LMBR1LQ6UX01 489 aa16.61■□□□□ 0.25
HDAC8-210ENST00000412342 ANKRD44Q8N8A2 993 aa16.61■□□□□ 0.25
HDAC8-210ENST00000412342 YTHDC1Q96MU7 727 aaKnown RBP16.61■□□□□ 0.25
HDAC8-210ENST00000412342 CDC5LQ99459 802 aaKnown RBP16.61■□□□□ 0.25
HDAC8-210ENST00000412342 IARSP41252 1262 aaKnown RBP16.6■□□□□ 0.25
HDAC8-210ENST00000412342 GPSM2P81274 684 aa16.6■□□□□ 0.25
HDAC8-210ENST00000412342 ANKRD18AQ8IVF6 992 aa16.6■□□□□ 0.25
HDAC8-210ENST00000412342 MPNDQ8N594 471 aa16.6■□□□□ 0.25
HDAC8-210ENST00000412342 BICC1Q9H694 974 aaKnown RBP16.6■□□□□ 0.25
HDAC8-210ENST00000412342 RLBP1P12271 317 aa16.59■□□□□ 0.25
HDAC8-210ENST00000412342 DPP8Q6V1X1 898 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-210ENST00000412342 TMEM57Q8N5G2 664 aa16.59■□□□□ 0.25
HDAC8-210ENST00000412342 CLUAP1Q96AJ1 413 aa16.59■□□□□ 0.25
HDAC8-210ENST00000412342 MEIS3Q99687 375 aa16.59■□□□□ 0.25
HDAC8-210ENST00000412342 BSDC1Q9NW68 430 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-210ENST00000412342 PODXL2Q9NZ53 605 aa16.59■□□□□ 0.25
HDAC8-210ENST00000412342 RCAN3Q9UKA8 241 aa16.59■□□□□ 0.25
HDAC8-210ENST00000412342 ANKRD18BA2A2Z9 1011 aa16.57■□□□□ 0.24
HDAC8-210ENST00000412342 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
HDAC8-210ENST00000412342 TMX4Q9H1E5 349 aaPredicted RBP16.57■□□□□ 0.24
HDAC8-210ENST00000412342 POLLQ9UGP5 575 aa16.57■□□□□ 0.24
HDAC8-210ENST00000412342 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
HDAC8-210ENST00000412342 WDR90Q96KV7 1748 aa16.56■□□□□ 0.24
HDAC8-210ENST00000412342 IGHMBP2P38935 993 aaKnown RBP16.56■□□□□ 0.24
HDAC8-210ENST00000412342 SUPT20HQ8NEM7 779 aa16.56■□□□□ 0.24
HDAC8-210ENST00000412342 TBC1D16Q8TBP0 767 aa16.56■□□□□ 0.24
HDAC8-210ENST00000412342 VPS33BQ9H267 617 aa16.56■□□□□ 0.24
HDAC8-210ENST00000412342 MINPP1Q9UNW1 487 aa16.56■□□□□ 0.24
HDAC8-210ENST00000412342 XDHP47989 1333 aa16.55■□□□□ 0.24
HDAC8-210ENST00000412342 FZD9O00144 591 aa16.55■□□□□ 0.24
HDAC8-210ENST00000412342 UBTFL1P0CB47 393 aaPredicted RBP16.55■□□□□ 0.24
HDAC8-210ENST00000412342 KIAA2012Q0VF49 1180 aa16.55■□□□□ 0.24
HDAC8-210ENST00000412342 AOC3Q16853 763 aa16.55■□□□□ 0.24
HDAC8-210ENST00000412342 DZIP1LQ8IYY4 767 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms