RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 DDX60Q8IY21 1712 aaKnown RBP20.66■□□□□ 0.9
DDR1-230ENST00000412274 IGKV5-2P06315 115 aa20.65■□□□□ 0.9
DDR1-230ENST00000412274 CCDC152Q4G0S7 254 aa20.65■□□□□ 0.9
DDR1-230ENST00000412274 LINS1Q8NG48 757 aa20.65■□□□□ 0.9
DDR1-230ENST00000412274 JDP2Q8WYK2 163 aa20.65■□□□□ 0.9
DDR1-230ENST00000412274 ZNF277Q9NRM2 450 aaPredicted RBP20.65■□□□□ 0.9
DDR1-230ENST00000412274 NEURL1BA8MQ27 555 aa20.64■□□□□ 0.89
DDR1-230ENST00000412274 CT47B1P0C2W7 299 aaPredicted RBP20.64■□□□□ 0.89
DDR1-230ENST00000412274 VEGFAP15692 232 aaPredicted RBP20.64■□□□□ 0.89
DDR1-230ENST00000412274 RTL5Q5HYW3 569 aaPredicted RBP20.63■□□□□ 0.89
DDR1-230ENST00000412274 RTFDC1Q9BY42 306 aaPredicted RBP20.63■□□□□ 0.89
DDR1-230ENST00000412274 NMRK2Q9NPI5 230 aa20.63■□□□□ 0.89
DDR1-230ENST00000412274 OLFM4Q6UX06 510 aa20.62■□□□□ 0.89
DDR1-230ENST00000412274 DPP8Q6V1X1 898 aaPredicted RBP20.62■□□□□ 0.89
DDR1-230ENST00000412274 TRMT2AQ8IZ69 625 aaKnown RBP20.62■□□□□ 0.89
DDR1-230ENST00000412274 MPNDQ8N594 471 aa20.62■□□□□ 0.89
DDR1-230ENST00000412274 RRAGCQ9HB90 399 aa20.62■□□□□ 0.89
DDR1-230ENST00000412274 H7C1W4 665 aa20.61■□□□□ 0.89
DDR1-230ENST00000412274 RPS8P62241 208 aaKnown RBP20.61■□□□□ 0.89
DDR1-230ENST00000412274 GCKRQ14397 625 aa20.61■□□□□ 0.89
DDR1-230ENST00000412274 MIER1Q8N108 512 aa20.61■□□□□ 0.89
DDR1-230ENST00000412274 RBM46Q8TBY0 533 aaKnown RBP20.61■□□□□ 0.89
DDR1-230ENST00000412274 FZD9O00144 591 aa20.6■□□□□ 0.89
DDR1-230ENST00000412274 CWF19L2Q2TBE0 894 aaKnown RBP20.6■□□□□ 0.89
DDR1-230ENST00000412274 WDR90Q96KV7 1748 aa20.59■□□□□ 0.89
DDR1-230ENST00000412274 IQCA1LA6NCM1 817 aa20.59■□□□□ 0.89
DDR1-230ENST00000412274 FSTL1Q12841 308 aa20.59■□□□□ 0.89
DDR1-230ENST00000412274 ALDH1L2Q3SY69 923 aa20.59■□□□□ 0.89
DDR1-230ENST00000412274 LARGE2Q8N3Y3 721 aa20.59■□□□□ 0.89
DDR1-230ENST00000412274 PLA2G12BQ9BX93 195 aa20.59■□□□□ 0.89
DDR1-230ENST00000412274 PTPRCP08575 1304 aa20.58■□□□□ 0.89
DDR1-230ENST00000412274 CTSWP56202 376 aa20.58■□□□□ 0.89
DDR1-230ENST00000412274 EIF6P56537 245 aaKnown RBP20.58■□□□□ 0.89
DDR1-230ENST00000412274 CELF1Q92879 486 aaKnown RBP20.58■□□□□ 0.89
DDR1-230ENST00000412274 CDC5LQ99459 802 aaKnown RBP20.58■□□□□ 0.89
DDR1-230ENST00000412274 RTL9Q8NET4 1388 aa20.58■□□□□ 0.88
DDR1-230ENST00000412274 ALDH1L1O75891 902 aa20.57■□□□□ 0.88
DDR1-230ENST00000412274 BEND3Q5T5X7 828 aa20.57■□□□□ 0.88
DDR1-230ENST00000412274 UBE3BQ7Z3V4 1068 aa20.57■□□□□ 0.88
DDR1-230ENST00000412274 NIM1KQ8IY84 436 aa20.57■□□□□ 0.88
DDR1-230ENST00000412274 GPC2Q8N158 579 aa20.57■□□□□ 0.88
DDR1-230ENST00000412274 L3MBTL3Q96JM7 780 aaPredicted RBP20.57■□□□□ 0.88
DDR1-230ENST00000412274 PPIP5K2O43314 1243 aa20.56■□□□□ 0.88
DDR1-230ENST00000412274 ANKRD18AQ8IVF6 992 aa20.56■□□□□ 0.88
DDR1-230ENST00000412274 TTLL11Q8NHH1 800 aa20.56■□□□□ 0.88
DDR1-230ENST00000412274 LRRC37AA6NMS7 1700 aa20.56■□□□□ 0.88
DDR1-230ENST00000412274 DDNO94850 711 aaPredicted RBP20.55■□□□□ 0.88
DDR1-230ENST00000412274 KIAA2012Q0VF49 1180 aa20.55■□□□□ 0.88
DDR1-230ENST00000412274 MRPL50Q8N5N7 158 aaKnown RBP20.55■□□□□ 0.88
DDR1-230ENST00000412274 CDCA7LQ96GN5 454 aa20.55■□□□□ 0.88
DDR1-230ENST00000412274 EYA3Q99504 573 aa20.55■□□□□ 0.88
DDR1-230ENST00000412274 SMC1BQ8NDV3 1235 aa20.54■□□□□ 0.88
DDR1-230ENST00000412274 SRCIN1Q9C0H9 1055 aa20.54■□□□□ 0.88
DDR1-230ENST00000412274 PODXL2Q9NZ53 605 aa20.54■□□□□ 0.88
DDR1-230ENST00000412274 NSFL1CQ9UNZ2 370 aaKnown RBP20.54■□□□□ 0.88
DDR1-230ENST00000412274 MYH3P11055 1940 aa20.53■□□□□ 0.88
DDR1-230ENST00000412274 F6X3S4 739 aa20.53■□□□□ 0.88
DDR1-230ENST00000412274 HSPA6P17066 643 aa20.53■□□□□ 0.88
DDR1-230ENST00000412274 JARID2Q92833 1246 aaPredicted RBP20.53■□□□□ 0.88
DDR1-230ENST00000412274 SEC31BQ9NQW1 1179 aa20.53■□□□□ 0.88
DDR1-230ENST00000412274 ZNRF3Q9ULT6 936 aa20.53■□□□□ 0.88
DDR1-230ENST00000412274 SCN4AP35499 1836 aa20.53■□□□□ 0.88
DDR1-230ENST00000412274 POTECB2RU33 542 aa20.52■□□□□ 0.88
DDR1-230ENST00000412274 CSF1RP07333 972 aa20.52■□□□□ 0.88
DDR1-230ENST00000412274 BRPF1P55201 1214 aaPredicted RBP20.52■□□□□ 0.88
DDR1-230ENST00000412274 CASP7P55210 303 aa20.52■□□□□ 0.88
DDR1-230ENST00000412274 AOC3Q16853 763 aa20.52■□□□□ 0.88
DDR1-230ENST00000412274 WASHC4Q2M389 1173 aa20.52■□□□□ 0.88
DDR1-230ENST00000412274 SSH1Q8WYL5 1049 aa20.52■□□□□ 0.88
DDR1-230ENST00000412274 C9orf78Q9NZ63 289 aaPredicted RBP20.52■□□□□ 0.88
DDR1-230ENST00000412274 GRM8O00222 908 aa20.51■□□□□ 0.87
DDR1-230ENST00000412274 SLC4A10Q6U841 1118 aa20.51■□□□□ 0.87
DDR1-230ENST00000412274 BSDC1Q9NW68 430 aaPredicted RBP20.51■□□□□ 0.87
DDR1-230ENST00000412274 ZNF541Q9H0D2 1346 aa20.51■□□□□ 0.87
DDR1-230ENST00000412274 TAF1P21675 1872 aa20.5■□□□□ 0.87
DDR1-230ENST00000412274 IGHMBP2P38935 993 aaKnown RBP20.5■□□□□ 0.87
DDR1-230ENST00000412274 TNIP1Q15025 636 aa20.5■□□□□ 0.87
DDR1-230ENST00000412274 PNMA8AQ86V59 439 aaPredicted RBP20.5■□□□□ 0.87
DDR1-230ENST00000412274 SMC4Q9NTJ3 1288 aa20.5■□□□□ 0.87
DDR1-230ENST00000412274 ANKIB1Q9P2G1 1089 aa20.5■□□□□ 0.87
DDR1-230ENST00000412274 HACL1Q9UJ83 578 aa20.5■□□□□ 0.87
DDR1-230ENST00000412274 C6orf229H3BNL8 230 aa20.49■□□□□ 0.87
DDR1-230ENST00000412274 GPSM2P81274 684 aa20.49■□□□□ 0.87
DDR1-230ENST00000412274 ZC3H12CQ9C0D7 883 aaKnown RBP20.49■□□□□ 0.87
DDR1-230ENST00000412274 GREM2Q9H772 168 aa20.49■□□□□ 0.87
DDR1-230ENST00000412274 GGA1Q9UJY5 639 aa20.49■□□□□ 0.87
DDR1-230ENST00000412274 XDHP47989 1333 aa20.49■□□□□ 0.87
DDR1-230ENST00000412274 LMOD1P29536 600 aaPredicted RBP20.48■□□□□ 0.87
DDR1-230ENST00000412274 APLP1P51693 650 aa20.48■□□□□ 0.87
DDR1-230ENST00000412274 TBC1D16Q8TBP0 767 aa20.48■□□□□ 0.87
DDR1-230ENST00000412274 CCDC85AQ96PX6 553 aaPredicted RBP20.48■□□□□ 0.87
DDR1-230ENST00000412274 ANKRD18BA2A2Z9 1011 aa20.47■□□□□ 0.87
DDR1-230ENST00000412274 ITGA6P23229 1130 aa20.47■□□□□ 0.87
DDR1-230ENST00000412274 ATP2B4P23634 1241 aa20.47■□□□□ 0.87
DDR1-230ENST00000412274 HNRNPUQ00839 825 aaKnown RBP eCLIP20.47■□□□□ 0.87
DDR1-230ENST00000412274 MPHOSPH8Q99549 860 aa20.47■□□□□ 0.87
DDR1-230ENST00000412274 TAF1DQ9H5J8 278 aaPredicted RBP20.47■□□□□ 0.87
DDR1-230ENST00000412274 POLLQ9UGP5 575 aa20.47■□□□□ 0.87
DDR1-230ENST00000412274 DUOX1Q9NRD9 1551 aa20.46■□□□□ 0.87
DDR1-230ENST00000412274 IFIT5Q13325 482 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms