RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 STK32BQ9NY57 414 aa14.28□□□□□ -0.12
SNRNP35-202ENST00000412157 SALL3Q9BXA9 1300 aa14.27□□□□□ -0.12
SNRNP35-202ENST00000412157 FAM177BA6PVY3 158 aa14.27□□□□□ -0.13
SNRNP35-202ENST00000412157 PHF14O94880 888 aa14.27□□□□□ -0.13
SNRNP35-202ENST00000412157 RFC4P35249 363 aa14.27□□□□□ -0.13
SNRNP35-202ENST00000412157 PDE1AP54750 535 aa14.27□□□□□ -0.13
SNRNP35-202ENST00000412157 CTSWP56202 376 aa14.27□□□□□ -0.13
SNRNP35-202ENST00000412157 PTPN12Q05209 780 aaKnown RBP14.27□□□□□ -0.13
SNRNP35-202ENST00000412157 TAF7LQ5H9L4 462 aa14.27□□□□□ -0.13
SNRNP35-202ENST00000412157 USPL1Q5W0Q7 1092 aa14.27□□□□□ -0.13
SNRNP35-202ENST00000412157 PDGFDQ9GZP0 370 aaPredicted RBP14.27□□□□□ -0.13
SNRNP35-202ENST00000412157 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.13
SNRNP35-202ENST00000412157 USP42Q9H9J4 1324 aaKnown RBP14.26□□□□□ -0.13
SNRNP35-202ENST00000412157 IFIT2P09913 472 aaKnown RBP14.26□□□□□ -0.13
SNRNP35-202ENST00000412157 IFIT5Q13325 482 aaKnown RBP14.26□□□□□ -0.13
SNRNP35-202ENST00000412157 KLHDC4Q8TBB5 520 aa14.26□□□□□ -0.13
SNRNP35-202ENST00000412157 ARHGEF1Q92888 912 aaKnown RBP14.26□□□□□ -0.13
SNRNP35-202ENST00000412157 STAP2Q9UGK3 403 aa14.26□□□□□ -0.13
SNRNP35-202ENST00000412157 SASH1O94885 1247 aa14.25□□□□□ -0.13
SNRNP35-202ENST00000412157 NTSR2O95665 410 aa14.25□□□□□ -0.13
SNRNP35-202ENST00000412157 CSF1RP07333 972 aa14.25□□□□□ -0.13
SNRNP35-202ENST00000412157 GSPT1P15170 499 aaKnown RBP14.25□□□□□ -0.13
SNRNP35-202ENST00000412157 SSFA2P28290 1259 aa14.25□□□□□ -0.13
SNRNP35-202ENST00000412157 AACSQ86V21 672 aa14.25□□□□□ -0.13
SNRNP35-202ENST00000412157 NUTM1Q86Y26 1132 aa14.25□□□□□ -0.13
SNRNP35-202ENST00000412157 NYXQ9GZU5 481 aa14.25□□□□□ -0.13
SNRNP35-202ENST00000412157 UPF2Q9HAU5 1272 aaKnown RBP14.25□□□□□ -0.13
SNRNP35-202ENST00000412157 SRP68Q9UHB9 627 aaKnown RBP14.25□□□□□ -0.13
SNRNP35-202ENST00000412157 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
SNRNP35-202ENST00000412157 TTC41PQ6P2S7 1318 aa14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 ANKRD18BA2A2Z9 1011 aa14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 EIF5BO60841 1220 aaKnown RBP14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 CDC45O75419 566 aa14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 CIAO1O76071 339 aa14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 TBC1D9BQ66K14 1250 aa14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 BICDL1Q6ZP65 573 aa14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 SMIM5Q71RC9 77 aa14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 SYNE4Q8N205 404 aa14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 TTLL11Q8NHH1 800 aa14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 SETDB2Q96T68 719 aa14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 QSER1Q2KHR3 1735 aa14.24□□□□□ -0.13
SNRNP35-202ENST00000412157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.23□□□□□ -0.13
SNRNP35-202ENST00000412157 EYA2O00167 538 aa14.23□□□□□ -0.13
SNRNP35-202ENST00000412157 ERC2O15083 957 aa14.23□□□□□ -0.13
SNRNP35-202ENST00000412157 GTF2E1P29083 439 aaPredicted RBP14.23□□□□□ -0.13
SNRNP35-202ENST00000412157 IL15P40933 162 aaPredicted RBP14.23□□□□□ -0.13
SNRNP35-202ENST00000412157 CASC1Q6TDU7 716 aa14.23□□□□□ -0.13
SNRNP35-202ENST00000412157 CCDC85AQ96PX6 553 aaPredicted RBP14.23□□□□□ -0.13
SNRNP35-202ENST00000412157 BCL2L12Q9HB09 334 aa14.23□□□□□ -0.13
SNRNP35-202ENST00000412157 A0A1B0GUL6 1792 aa14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 ARAP2Q8WZ64 1704 aa14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 HCLS1P14317 486 aaPredicted RBP14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 ITGA6P23229 1130 aa14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 ANP32AP39687 249 aaKnown RBP14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 PTGER2P43116 358 aa14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 TFCP2Q12800 502 aa14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 CCDC152Q4G0S7 254 aa14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 ZNF784Q8NCA9 323 aaPredicted RBP14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 ZNF594Q96JF6 807 aaPredicted RBP14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 FHDC1Q9C0D6 1143 aaPredicted RBP14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 ECHDC1Q9NTX5 307 aa14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 CARMIL3Q8ND23 1372 aa14.22□□□□□ -0.13
SNRNP35-202ENST00000412157 TRIM6-TRIM34B2RNG4 842 aa14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 NPHP1O15259 732 aa14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 GLRX3O76003 335 aaKnown RBP14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 SDSP20132 328 aa14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 SLC15A2Q16348 729 aa14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 TNNI3KQ59H18 835 aa14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 TSHZ3Q63HK5 1081 aa14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 AMIGO3Q86WK7 504 aa14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 NBPF5PQ86XG9 351 aaPredicted RBP14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 PROM2Q8N271 834 aa14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 GREM2Q9H772 168 aa14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 FPGT-TNNI3KV9GXZ4 949 aa14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 ZNF609O15014 1411 aa14.21□□□□□ -0.13
SNRNP35-202ENST00000412157 RTL9Q8NET4 1388 aa14.21□□□□□ -0.14
SNRNP35-202ENST00000412157 ATG9AQ7Z3C6 839 aa14.2□□□□□ -0.14
SNRNP35-202ENST00000412157 EAF2Q96CJ1 260 aaPredicted RBP14.2□□□□□ -0.14
SNRNP35-202ENST00000412157 MTFR1LQ9H019 292 aa14.2□□□□□ -0.14
SNRNP35-202ENST00000412157 CCDC8Q9H0W5 538 aaPredicted RBP14.2□□□□□ -0.14
SNRNP35-202ENST00000412157 GPR108Q9NPR9 543 aa14.2□□□□□ -0.14
SNRNP35-202ENST00000412157 CEP126Q9P2H0 1117 aa14.2□□□□□ -0.14
SNRNP35-202ENST00000412157 MFAP1P55081 439 aaKnown RBP14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 ERFEQ4G0M1 354 aa14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 LRRC24Q50LG9 513 aa14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 TPTE2Q6XPS3 522 aa14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 TBC1D9Q6ZT07 1266 aa14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 CNTROBQ8N137 903 aa14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 FLAD1Q8NFF5 587 aa14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 PI4K2BQ8TCG2 481 aa14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 RILPL2Q969X0 211 aa14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 SYT17Q9BSW7 474 aa14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 CNNM1Q9NRU3 951 aa14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 TFCP2L1Q9NZI6 479 aa14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 TNRC6CQ9HCJ0 1690 aaKnown RBP14.19□□□□□ -0.14
SNRNP35-202ENST00000412157 TAF1P21675 1872 aa14.18□□□□□ -0.14
SNRNP35-202ENST00000412157 RIC1Q4ADV7 1423 aa14.18□□□□□ -0.14
SNRNP35-202ENST00000412157 IGHMBP2P38935 993 aaKnown RBP14.18□□□□□ -0.14
SNRNP35-202ENST00000412157 LDHAL6AQ6ZMR3 332 aa14.18□□□□□ -0.14
SNRNP35-202ENST00000412157 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms