RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 ZNRF3Q9ULT6 936 aa11.93□□□□□ -0.5
MRPL48-204ENST00000411840 TRAF5O00463 557 aa11.92□□□□□ -0.5
MRPL48-204ENST00000411840 MAP2K1Q02750 393 aaPredicted RBP11.92□□□□□ -0.5
MRPL48-204ENST00000411840 CXCL9Q07325 125 aa11.92□□□□□ -0.5
MRPL48-204ENST00000411840 TCIRG1Q13488 830 aa11.92□□□□□ -0.5
MRPL48-204ENST00000411840 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
MRPL48-204ENST00000411840 CST9Q5W186 159 aa11.92□□□□□ -0.5
MRPL48-204ENST00000411840 ADARB2Q9NS39 739 aaKnown RBP11.92□□□□□ -0.5
MRPL48-204ENST00000411840 GPRC5DQ9NZD1 345 aa11.92□□□□□ -0.5
MRPL48-204ENST00000411840 TRMT112Q9UI30 125 aaKnown RBP11.92□□□□□ -0.5
MRPL48-204ENST00000411840 CHL1O00533 1208 aa11.91□□□□□ -0.5
MRPL48-204ENST00000411840 DDX46Q7L014 1031 aaKnown RBP11.91□□□□□ -0.5
MRPL48-204ENST00000411840 MPNDQ8N594 471 aa11.91□□□□□ -0.5
MRPL48-204ENST00000411840 LAS1LQ9Y4W2 734 aaKnown RBP11.91□□□□□ -0.5
MRPL48-204ENST00000411840 SH3TC1Q8TE82 1336 aa11.9□□□□□ -0.5
MRPL48-204ENST00000411840 GMPSP49915 693 aaPredicted RBP11.9□□□□□ -0.5
MRPL48-204ENST00000411840 KIAA2012Q0VF49 1180 aa11.9□□□□□ -0.5
MRPL48-204ENST00000411840 KRT24Q2M2I5 525 aa11.9□□□□□ -0.5
MRPL48-204ENST00000411840 PAXIP1Q6ZW49 1069 aaPredicted RBP11.9□□□□□ -0.5
MRPL48-204ENST00000411840 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
MRPL48-204ENST00000411840 CAPNS2Q96L46 248 aa11.9□□□□□ -0.5
MRPL48-204ENST00000411840 LTBP1Q14766 1721 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 RAD17O75943 681 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 HSPA8P11142 646 aaKnown RBP11.89□□□□□ -0.51
MRPL48-204ENST00000411840 ECE1P42892 770 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 GRM1Q13255 1194 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 GRAPQ13588 217 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 TNIP1Q15025 636 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 CIAPIN1Q6FI81 312 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 CYP4F22Q6NT55 531 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
MRPL48-204ENST00000411840 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 GPR101Q96P66 508 aaPredicted RBP11.89□□□□□ -0.51
MRPL48-204ENST00000411840 CHPF2Q9P2E5 772 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 PGAP2Q9UHJ9 254 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 TRIM35Q9UPQ4 493 aa11.89□□□□□ -0.51
MRPL48-204ENST00000411840 NUP98P52948 1817 aa11.88□□□□□ -0.51
MRPL48-204ENST00000411840 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
MRPL48-204ENST00000411840 TMC4Q7Z404 712 aa11.88□□□□□ -0.51
MRPL48-204ENST00000411840 PLBD2Q8NHP8 589 aa11.88□□□□□ -0.51
MRPL48-204ENST00000411840 RUNDC1Q96C34 613 aa11.88□□□□□ -0.51
MRPL48-204ENST00000411840 BCL2L13Q9BXK5 485 aa11.88□□□□□ -0.51
MRPL48-204ENST00000411840 TLL2Q9Y6L7 1015 aa11.88□□□□□ -0.51
MRPL48-204ENST00000411840 DLG5Q8TDM6 1919 aa11.88□□□□□ -0.51
MRPL48-204ENST00000411840 ABCB7O75027 752 aa11.87□□□□□ -0.51
MRPL48-204ENST00000411840 HIRAP54198 1017 aaPredicted RBP11.87□□□□□ -0.51
MRPL48-204ENST00000411840 DDX10Q13206 875 aaKnown RBP11.87□□□□□ -0.51
MRPL48-204ENST00000411840 HDGFL1Q5TGJ6 251 aa11.87□□□□□ -0.51
MRPL48-204ENST00000411840 ZC3H15Q8WU90 426 aaKnown RBP11.87□□□□□ -0.51
MRPL48-204ENST00000411840 FAM89AQ96GI7 184 aa11.87□□□□□ -0.51
MRPL48-204ENST00000411840 BEGAINQ9BUH8 593 aa11.87□□□□□ -0.51
MRPL48-204ENST00000411840 DBF4Q9UBU7 674 aaPredicted RBP11.87□□□□□ -0.51
MRPL48-204ENST00000411840 CNOT7Q9UIV1 285 aaKnown RBP11.87□□□□□ -0.51
MRPL48-204ENST00000411840 MYBBP1AQ9BQG0 1328 aaKnown RBP11.86□□□□□ -0.51
MRPL48-204ENST00000411840 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
MRPL48-204ENST00000411840 YDJCA8MPS7 323 aa11.86□□□□□ -0.51
MRPL48-204ENST00000411840 ATP5J2-PTCD1G3V325 749 aa11.86□□□□□ -0.51
MRPL48-204ENST00000411840 AOC2O75106 756 aa11.86□□□□□ -0.51
MRPL48-204ENST00000411840 CELF2O95319 508 aaKnown RBP11.86□□□□□ -0.51
MRPL48-204ENST00000411840 MAP2K2P36507 400 aa11.86□□□□□ -0.51
MRPL48-204ENST00000411840 WDR43Q15061 677 aaKnown RBP eCLIP11.86□□□□□ -0.51
MRPL48-204ENST00000411840 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
MRPL48-204ENST00000411840 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
MRPL48-204ENST00000411840 SAPCD2Q86UD0 394 aa11.86□□□□□ -0.51
MRPL48-204ENST00000411840 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
MRPL48-204ENST00000411840 GLIS2Q9BZE0 524 aaPredicted RBP11.86□□□□□ -0.51
MRPL48-204ENST00000411840 NSFL1CQ9UNZ2 370 aaKnown RBP11.86□□□□□ -0.51
MRPL48-204ENST00000411840 ADAMTS8Q9UP79 889 aa11.86□□□□□ -0.51
MRPL48-204ENST00000411840 H7C1D1 291 aa11.85□□□□□ -0.51
MRPL48-204ENST00000411840 HOXB7P09629 217 aa11.85□□□□□ -0.51
MRPL48-204ENST00000411840 CDC37L1Q7L3B6 337 aa11.85□□□□□ -0.51
MRPL48-204ENST00000411840 CELF1Q92879 486 aaKnown RBP11.85□□□□□ -0.51
MRPL48-204ENST00000411840 HYPKQ9NX55 129 aa11.85□□□□□ -0.51
MRPL48-204ENST00000411840 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
MRPL48-204ENST00000411840 SHTN1A0MZ66 631 aa11.84□□□□□ -0.51
MRPL48-204ENST00000411840 C6orf229H3BNL8 230 aa11.84□□□□□ -0.51
MRPL48-204ENST00000411840 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
MRPL48-204ENST00000411840 TRIM28Q13263 835 aaKnown RBP11.84□□□□□ -0.51
MRPL48-204ENST00000411840 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
MRPL48-204ENST00000411840 USP48Q86UV5 1035 aa11.84□□□□□ -0.51
MRPL48-204ENST00000411840 TRPM4Q8TD43 1214 aa11.84□□□□□ -0.51
MRPL48-204ENST00000411840 DPF2Q92785 391 aa11.84□□□□□ -0.51
MRPL48-204ENST00000411840 ABHD8Q96I13 439 aa11.84□□□□□ -0.51
MRPL48-204ENST00000411840 HHIPL1Q96JK4 782 aa11.84□□□□□ -0.51
MRPL48-204ENST00000411840 CFAP44Q96MT7 982 aa11.84□□□□□ -0.51
MRPL48-204ENST00000411840 ZNF408Q9H9D4 720 aa11.84□□□□□ -0.51
MRPL48-204ENST00000411840 GPSM2P81274 684 aa11.83□□□□□ -0.52
MRPL48-204ENST00000411840 DUSP27Q5VZP5 1158 aa11.83□□□□□ -0.52
MRPL48-204ENST00000411840 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
MRPL48-204ENST00000411840 DBNDD1Q9H9R9 158 aa11.83□□□□□ -0.52
MRPL48-204ENST00000411840 POLLQ9UGP5 575 aa11.83□□□□□ -0.52
MRPL48-204ENST00000411840 PSMD14O00487 310 aa11.82□□□□□ -0.52
MRPL48-204ENST00000411840 IRS4O14654 1257 aaPredicted RBP11.82□□□□□ -0.52
MRPL48-204ENST00000411840 RPS8P62241 208 aaKnown RBP11.82□□□□□ -0.52
MRPL48-204ENST00000411840 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
MRPL48-204ENST00000411840 DLK2Q6UY11 383 aa11.82□□□□□ -0.52
MRPL48-204ENST00000411840 SAMD7Q7Z3H4 446 aa11.82□□□□□ -0.52
MRPL48-204ENST00000411840 KCNQ5Q9NR82 932 aa11.82□□□□□ -0.52
MRPL48-204ENST00000411840 MBIPQ9NS73 344 aa11.82□□□□□ -0.52
MRPL48-204ENST00000411840 TSKSQ9UJT2 592 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms