RNA–Protein interactions for RNA: ENST00000411731.6

ERBB3-202, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best) BASIC

Gene ERBB3, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-202ENST00000411731 PELP1Q8IZL8 1130 aaKnown RBP18.73■□□□□ 0.59
ERBB3-202ENST00000411731 TMEM57Q8N5G2 664 aa18.73■□□□□ 0.59
ERBB3-202ENST00000411731 TTLL11Q8NHH1 800 aa18.73■□□□□ 0.59
ERBB3-202ENST00000411731 CRAMP1Q96RY5 1269 aa18.73■□□□□ 0.59
ERBB3-202ENST00000411731 CSF1RP07333 972 aa18.72■□□□□ 0.59
ERBB3-202ENST00000411731 GPR162Q16538 588 aa18.72■□□□□ 0.59
ERBB3-202ENST00000411731 PRPF40BQ6NWY9 871 aaKnown RBP18.72■□□□□ 0.59
ERBB3-202ENST00000411731 OLFM4Q6UX06 510 aa18.72■□□□□ 0.59
ERBB3-202ENST00000411731 CNKSR1Q969H4 720 aa18.72■□□□□ 0.59
ERBB3-202ENST00000411731 SUCLG2Q96I99 432 aa18.72■□□□□ 0.59
ERBB3-202ENST00000411731 CCDC85AQ96PX6 553 aaPredicted RBP18.72■□□□□ 0.59
ERBB3-202ENST00000411731 SEC31BQ9NQW1 1179 aa18.72■□□□□ 0.59
ERBB3-202ENST00000411731 C9orf78Q9NZ63 289 aaPredicted RBP18.72■□□□□ 0.59
ERBB3-202ENST00000411731 CTSWP56202 376 aa18.71■□□□□ 0.59
ERBB3-202ENST00000411731 RPGRQ92834 1020 aaKnown RBP18.71■□□□□ 0.59
ERBB3-202ENST00000411731 CELF1Q92879 486 aaKnown RBP18.71■□□□□ 0.59
ERBB3-202ENST00000411731 C21orf2O43822 256 aa18.7■□□□□ 0.58
ERBB3-202ENST00000411731 ALDH1B1P30837 517 aa18.7■□□□□ 0.58
ERBB3-202ENST00000411731 SNED1Q8TER0 1413 aa18.7■□□□□ 0.58
ERBB3-202ENST00000411731 RBM17Q96I25 401 aaKnown RBP18.7■□□□□ 0.58
ERBB3-202ENST00000411731 GREM2Q9H772 168 aa18.7■□□□□ 0.58
ERBB3-202ENST00000411731 C20orf194Q5TEA3 1177 aa18.69■□□□□ 0.58
ERBB3-202ENST00000411731 DZIP1LQ8IYY4 767 aaKnown RBP18.69■□□□□ 0.58
ERBB3-202ENST00000411731 PANK1Q8TE04 598 aa18.69■□□□□ 0.58
ERBB3-202ENST00000411731 MEIS3Q99687 375 aa18.69■□□□□ 0.58
ERBB3-202ENST00000411731 ZNF219Q9P2Y4 722 aaPredicted RBP18.69■□□□□ 0.58
ERBB3-202ENST00000411731 PRELPP51888 382 aa18.68■□□□□ 0.58
ERBB3-202ENST00000411731 ANKRD44Q8N8A2 993 aa18.68■□□□□ 0.58
ERBB3-202ENST00000411731 FER1L6Q2WGJ9 1857 aa18.68■□□□□ 0.58
ERBB3-202ENST00000411731 GRAPQ13588 217 aa18.67■□□□□ 0.58
ERBB3-202ENST00000411731 DDX46Q7L014 1031 aaKnown RBP18.67■□□□□ 0.58
ERBB3-202ENST00000411731 GRAPLQ8TC17 118 aaPredicted RBP18.67■□□□□ 0.58
ERBB3-202ENST00000411731 BICC1Q9H694 974 aaKnown RBP18.67■□□□□ 0.58
ERBB3-202ENST00000411731 RTL9Q8NET4 1388 aa18.67■□□□□ 0.58
ERBB3-202ENST00000411731 HSP90B1P14625 803 aaKnown RBP18.66■□□□□ 0.58
ERBB3-202ENST00000411731 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
ERBB3-202ENST00000411731 RABL6Q3YEC7 729 aaPredicted RBP18.66■□□□□ 0.58
ERBB3-202ENST00000411731 CCDC152Q4G0S7 254 aa18.66■□□□□ 0.58
ERBB3-202ENST00000411731 LMBR1LQ6UX01 489 aa18.66■□□□□ 0.58
ERBB3-202ENST00000411731 SBF1O95248 1867 aa18.65■□□□□ 0.58
ERBB3-202ENST00000411731 NFKBIEO00221 500 aa18.65■□□□□ 0.58
ERBB3-202ENST00000411731 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
ERBB3-202ENST00000411731 ZBTB7BO15156 539 aaPredicted RBP18.65■□□□□ 0.58
ERBB3-202ENST00000411731 GRIN3BO60391 1043 aa18.65■□□□□ 0.58
ERBB3-202ENST00000411731 BBOX1O75936 387 aa18.65■□□□□ 0.58
ERBB3-202ENST00000411731 SPEF2Q9C093 1822 aa18.65■□□□□ 0.58
ERBB3-202ENST00000411731 LRRC37AA6NMS7 1700 aa18.64■□□□□ 0.57
ERBB3-202ENST00000411731 RPS8P62241 208 aaKnown RBP18.64■□□□□ 0.57
ERBB3-202ENST00000411731 ARHGAP27Q6ZUM4 889 aa18.64■□□□□ 0.57
ERBB3-202ENST00000411731 ATP6V0A2Q9Y487 856 aa18.64■□□□□ 0.57
ERBB3-202ENST00000411731 ITGA6P23229 1130 aa18.63■□□□□ 0.57
ERBB3-202ENST00000411731 RASSF7Q02833 373 aa18.63■□□□□ 0.57
ERBB3-202ENST00000411731 SP8Q8IXZ3 490 aa18.63■□□□□ 0.57
ERBB3-202ENST00000411731 CCDC88AQ3V6T2 1871 aa18.63■□□□□ 0.57
ERBB3-202ENST00000411731 FTSJ3Q8IY81 847 aaKnown RBP18.62■□□□□ 0.57
ERBB3-202ENST00000411731 LRRFIP2Q9Y608 721 aaKnown RBP18.62■□□□□ 0.57
ERBB3-202ENST00000411731 LTBP1Q14766 1721 aa18.61■□□□□ 0.57
ERBB3-202ENST00000411731 UBTFL1P0CB47 393 aaPredicted RBP18.61■□□□□ 0.57
ERBB3-202ENST00000411731 RRP1P56182 461 aaKnown RBP18.61■□□□□ 0.57
ERBB3-202ENST00000411731 ZNF594Q96JF6 807 aaPredicted RBP18.61■□□□□ 0.57
ERBB3-202ENST00000411731 COG6Q9Y2V7 657 aa18.61■□□□□ 0.57
ERBB3-202ENST00000411731 CHD4Q14839 1912 aa18.61■□□□□ 0.57
ERBB3-202ENST00000411731 RFX5P48382 616 aaPredicted RBP18.6■□□□□ 0.57
ERBB3-202ENST00000411731 PDE3AQ14432 1141 aa18.6■□□□□ 0.57
ERBB3-202ENST00000411731 ITPRIPQ8IWB1 547 aa18.6■□□□□ 0.57
ERBB3-202ENST00000411731 DUOX1Q9NRD9 1551 aa18.59■□□□□ 0.57
ERBB3-202ENST00000411731 DCAF8L1A6NGE4 600 aa18.59■□□□□ 0.57
ERBB3-202ENST00000411731 WTIPA6NIX2 430 aaPredicted RBP18.59■□□□□ 0.57
ERBB3-202ENST00000411731 GNAI3P08754 354 aa18.59■□□□□ 0.57
ERBB3-202ENST00000411731 MVPQ14764 893 aaKnown RBP18.59■□□□□ 0.57
ERBB3-202ENST00000411731 CCDC93Q567U6 631 aa18.59■□□□□ 0.57
ERBB3-202ENST00000411731 ANKRD18BA2A2Z9 1011 aa18.58■□□□□ 0.56
ERBB3-202ENST00000411731 GPSM2P81274 684 aa18.58■□□□□ 0.56
ERBB3-202ENST00000411731 IFIT5Q13325 482 aaKnown RBP18.58■□□□□ 0.56
ERBB3-202ENST00000411731 ANKRD18AQ8IVF6 992 aa18.58■□□□□ 0.56
ERBB3-202ENST00000411731 KLHDC4Q8TBB5 520 aa18.58■□□□□ 0.56
ERBB3-202ENST00000411731 CDC5LQ99459 802 aaKnown RBP18.58■□□□□ 0.56
ERBB3-202ENST00000411731 C1orf115Q9H7X2 142 aa18.58■□□□□ 0.56
ERBB3-202ENST00000411731 BSDC1Q9NW68 430 aaPredicted RBP18.58■□□□□ 0.56
ERBB3-202ENST00000411731 CHMP3Q9Y3E7 222 aa18.58■□□□□ 0.56
ERBB3-202ENST00000411731 LTBP3Q9NS15 1303 aa18.57■□□□□ 0.56
ERBB3-202ENST00000411731 MS4A1P11836 297 aa18.57■□□□□ 0.56
ERBB3-202ENST00000411731 CC2D2BQ6DHV5 1058 aa18.57■□□□□ 0.56
ERBB3-202ENST00000411731 TMC4Q7Z404 712 aa18.57■□□□□ 0.56
ERBB3-202ENST00000411731 RTKN2Q8IZC4 609 aa18.57■□□□□ 0.56
ERBB3-202ENST00000411731 PUS3Q9BZE2 481 aaKnown RBP18.57■□□□□ 0.56
ERBB3-202ENST00000411731 MINPP1Q9UNW1 487 aa18.57■□□□□ 0.56
ERBB3-202ENST00000411731 A0A1B0GUL6 1792 aa18.57■□□□□ 0.56
ERBB3-202ENST00000411731 COL4A5P29400 1685 aa18.57■□□□□ 0.56
ERBB3-202ENST00000411731 GNAI2P04899 355 aa18.56■□□□□ 0.56
ERBB3-202ENST00000411731 FKBP4Q02790 459 aaKnown RBP eCLIP18.56■□□□□ 0.56
ERBB3-202ENST00000411731 CCDC57Q2TAC2 916 aa18.56■□□□□ 0.56
ERBB3-202ENST00000411731 SOGA3Q5TF21 947 aa18.56■□□□□ 0.56
ERBB3-202ENST00000411731 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.56■□□□□ 0.56
ERBB3-202ENST00000411731 PSMD1Q99460 953 aa18.56■□□□□ 0.56
ERBB3-202ENST00000411731 RTFDC1Q9BY42 306 aaPredicted RBP18.56■□□□□ 0.56
ERBB3-202ENST00000411731 DICER1Q9UPY3 1922 aaKnown RBP18.55■□□□□ 0.56
ERBB3-202ENST00000411731 PTPN12Q05209 780 aaKnown RBP18.55■□□□□ 0.56
ERBB3-202ENST00000411731 MTX1Q13505 466 aa18.55■□□□□ 0.56
ERBB3-202ENST00000411731 TAOK3Q9H2K8 898 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms