RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 CASP7P55210 303 aa12.72□□□□□ -0.37
TTC39A-207ENST00000411642 SF3B3Q15393 1217 aaKnown RBP12.72□□□□□ -0.37
TTC39A-207ENST00000411642 ZKSCAN2Q63HK3 967 aa12.72□□□□□ -0.37
TTC39A-207ENST00000411642 CRAMP1Q96RY5 1269 aa12.72□□□□□ -0.37
TTC39A-207ENST00000411642 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
TTC39A-207ENST00000411642 TNNQ9UQP3 1299 aa12.72□□□□□ -0.37
TTC39A-207ENST00000411642 DICER1Q9UPY3 1922 aaKnown RBP12.72□□□□□ -0.37
TTC39A-207ENST00000411642 C21orf2O43822 256 aa12.71□□□□□ -0.37
TTC39A-207ENST00000411642 CTSWP56202 376 aa12.71□□□□□ -0.37
TTC39A-207ENST00000411642 DDX46Q7L014 1031 aaKnown RBP12.71□□□□□ -0.37
TTC39A-207ENST00000411642 CLUAP1Q96AJ1 413 aa12.71□□□□□ -0.37
TTC39A-207ENST00000411642 CCDC85AQ96PX6 553 aaPredicted RBP12.71□□□□□ -0.37
TTC39A-207ENST00000411642 NBPF7P0C2Y1 421 aaPredicted RBP12.7□□□□□ -0.38
TTC39A-207ENST00000411642 CCDC152Q4G0S7 254 aa12.7□□□□□ -0.38
TTC39A-207ENST00000411642 PLA2G12BQ9BX93 195 aa12.7□□□□□ -0.38
TTC39A-207ENST00000411642 UTYO14607 1347 aa12.69□□□□□ -0.38
TTC39A-207ENST00000411642 PPEF1O14829 653 aaPredicted RBP12.69□□□□□ -0.38
TTC39A-207ENST00000411642 GRAPQ13588 217 aa12.69□□□□□ -0.38
TTC39A-207ENST00000411642 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
TTC39A-207ENST00000411642 ARHGAP27Q6ZUM4 889 aa12.69□□□□□ -0.38
TTC39A-207ENST00000411642 FTSJ3Q8IY81 847 aaKnown RBP12.69□□□□□ -0.38
TTC39A-207ENST00000411642 TTLL11Q8NHH1 800 aa12.69□□□□□ -0.38
TTC39A-207ENST00000411642 GRAPLQ8TC17 118 aaPredicted RBP12.69□□□□□ -0.38
TTC39A-207ENST00000411642 A0A1B0GUL6 1792 aa12.69□□□□□ -0.38
TTC39A-207ENST00000411642 TIAM2Q8IVF5 1701 aa12.68□□□□□ -0.38
TTC39A-207ENST00000411642 CCDC93Q567U6 631 aa12.68□□□□□ -0.38
TTC39A-207ENST00000411642 SOGA3Q5TF21 947 aa12.68□□□□□ -0.38
TTC39A-207ENST00000411642 OLFM4Q6UX06 510 aa12.68□□□□□ -0.38
TTC39A-207ENST00000411642 C7orf43Q8WVR3 580 aa12.68□□□□□ -0.38
TTC39A-207ENST00000411642 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
TTC39A-207ENST00000411642 SUCLG2Q96I99 432 aa12.68□□□□□ -0.38
TTC39A-207ENST00000411642 USP44Q9H0E7 712 aa12.68□□□□□ -0.38
TTC39A-207ENST00000411642 GREM2Q9H772 168 aa12.68□□□□□ -0.38
TTC39A-207ENST00000411642 SEC31BQ9NQW1 1179 aa12.68□□□□□ -0.38
TTC39A-207ENST00000411642 RTL9Q8NET4 1388 aa12.68□□□□□ -0.38
TTC39A-207ENST00000411642 BBOX1O75936 387 aa12.67□□□□□ -0.38
TTC39A-207ENST00000411642 FOXO4P98177 505 aa12.67□□□□□ -0.38
TTC39A-207ENST00000411642 RASSF7Q02833 373 aa12.67□□□□□ -0.38
TTC39A-207ENST00000411642 FAM161AQ3B820 660 aa12.67□□□□□ -0.38
TTC39A-207ENST00000411642 EPHA10Q5JZY3 1008 aa12.67□□□□□ -0.38
TTC39A-207ENST00000411642 SLC51AQ86UW1 340 aa12.67□□□□□ -0.38
TTC39A-207ENST00000411642 DZIP1LQ8IYY4 767 aaKnown RBP12.67□□□□□ -0.38
TTC39A-207ENST00000411642 TMEM57Q8N5G2 664 aa12.67□□□□□ -0.38
TTC39A-207ENST00000411642 LTBP1Q14766 1721 aa12.67□□□□□ -0.38
TTC39A-207ENST00000411642 SNED1Q8TER0 1413 aa12.66□□□□□ -0.38
TTC39A-207ENST00000411642 NFKBIEO00221 500 aa12.66□□□□□ -0.38
TTC39A-207ENST00000411642 PLIN1O60240 522 aa12.66□□□□□ -0.38
TTC39A-207ENST00000411642 CSF1RP07333 972 aa12.66□□□□□ -0.38
TTC39A-207ENST00000411642 UBTFL1P0CB47 393 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-207ENST00000411642 RLBP1P12271 317 aa12.66□□□□□ -0.38
TTC39A-207ENST00000411642 LMBR1LQ6UX01 489 aa12.66□□□□□ -0.38
TTC39A-207ENST00000411642 KAZALD1Q96I82 304 aa12.66□□□□□ -0.38
TTC39A-207ENST00000411642 CDC5LQ99459 802 aaKnown RBP12.66□□□□□ -0.38
TTC39A-207ENST00000411642 MEIS3Q99687 375 aa12.66□□□□□ -0.38
TTC39A-207ENST00000411642 CHMP3Q9Y3E7 222 aa12.66□□□□□ -0.38
TTC39A-207ENST00000411642 ATP6V0A2Q9Y487 856 aa12.66□□□□□ -0.38
TTC39A-207ENST00000411642 ITGA6P23229 1130 aa12.65□□□□□ -0.38
TTC39A-207ENST00000411642 RPS8P62241 208 aaKnown RBP12.65□□□□□ -0.38
TTC39A-207ENST00000411642 CC2D2BQ6DHV5 1058 aa12.65□□□□□ -0.38
TTC39A-207ENST00000411642 TMC4Q7Z404 712 aa12.65□□□□□ -0.38
TTC39A-207ENST00000411642 ANKRD18AQ8IVF6 992 aa12.65□□□□□ -0.38
TTC39A-207ENST00000411642 ITPRIPQ8IWB1 547 aa12.65□□□□□ -0.38
TTC39A-207ENST00000411642 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-207ENST00000411642 TMX4Q9H1E5 349 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-207ENST00000411642 TAOK3Q9H2K8 898 aa12.65□□□□□ -0.38
TTC39A-207ENST00000411642 BICC1Q9H694 974 aaKnown RBP12.65□□□□□ -0.38
TTC39A-207ENST00000411642 MS4A1P11836 297 aa12.64□□□□□ -0.39
TTC39A-207ENST00000411642 SP8Q8IXZ3 490 aa12.64□□□□□ -0.39
TTC39A-207ENST00000411642 RTKN2Q8IZC4 609 aa12.64□□□□□ -0.39
TTC39A-207ENST00000411642 PANK1Q8TE04 598 aa12.64□□□□□ -0.39
TTC39A-207ENST00000411642 DUOX1Q9NRD9 1551 aa12.64□□□□□ -0.39
TTC39A-207ENST00000411642 LTBP3Q9NS15 1303 aa12.63□□□□□ -0.39
TTC39A-207ENST00000411642 ANKRD18BA2A2Z9 1011 aa12.63□□□□□ -0.39
TTC39A-207ENST00000411642 GNAI3P08754 354 aa12.63□□□□□ -0.39
TTC39A-207ENST00000411642 FKBP4Q02790 459 aaKnown RBP eCLIP12.63□□□□□ -0.39
TTC39A-207ENST00000411642 IFIT5Q13325 482 aaKnown RBP12.63□□□□□ -0.39
TTC39A-207ENST00000411642 RABL6Q3YEC7 729 aaPredicted RBP12.63□□□□□ -0.39
TTC39A-207ENST00000411642 ANKRD44Q8N8A2 993 aa12.63□□□□□ -0.39
TTC39A-207ENST00000411642 HDAC5Q9UQL6 1122 aa12.63□□□□□ -0.39
TTC39A-207ENST00000411642 LRRFIP2Q9Y608 721 aaKnown RBP12.63□□□□□ -0.39
TTC39A-207ENST00000411642 LMNB1P20700 586 aa12.62□□□□□ -0.39
TTC39A-207ENST00000411642 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
TTC39A-207ENST00000411642 CCDC57Q2TAC2 916 aa12.62□□□□□ -0.39
TTC39A-207ENST00000411642 GRIPAP1Q4V328 841 aa12.62□□□□□ -0.39
TTC39A-207ENST00000411642 RNF181Q9P0P0 153 aa12.62□□□□□ -0.39
TTC39A-207ENST00000411642 PRELPP51888 382 aa12.61□□□□□ -0.39
TTC39A-207ENST00000411642 TAF7LQ5H9L4 462 aa12.61□□□□□ -0.39
TTC39A-207ENST00000411642 C9orf131Q5VYM1 1079 aa12.61□□□□□ -0.39
TTC39A-207ENST00000411642 DPP8Q6V1X1 898 aaPredicted RBP12.61□□□□□ -0.39
TTC39A-207ENST00000411642 MPNDQ8N594 471 aa12.61□□□□□ -0.39
TTC39A-207ENST00000411642 PSMD1Q99460 953 aa12.61□□□□□ -0.39
TTC39A-207ENST00000411642 MPHOSPH8Q99549 860 aa12.61□□□□□ -0.39
TTC39A-207ENST00000411642 ZNF277Q9NRM2 450 aaPredicted RBP12.61□□□□□ -0.39
TTC39A-207ENST00000411642 BSDC1Q9NW68 430 aaPredicted RBP12.61□□□□□ -0.39
TTC39A-207ENST00000411642 NSFL1CQ9UNZ2 370 aaKnown RBP12.61□□□□□ -0.39
TTC39A-207ENST00000411642 GNAI2P04899 355 aa12.6□□□□□ -0.39
TTC39A-207ENST00000411642 YY1P25490 414 aa12.6□□□□□ -0.39
TTC39A-207ENST00000411642 GPSM2P81274 684 aa12.6□□□□□ -0.39
TTC39A-207ENST00000411642 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
TTC39A-207ENST00000411642 ZNF594Q96JF6 807 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms