RNA–Protein interactions for RNA: ENST00000410662.1

RN7SKP235-201, Transcript of RNA, 7SK small nuclear pseudogene 235, humanhuman

BASIC

Gene RN7SKP235, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP235-201ENST00000410662 NLRP1Q9C000 1473 aa6.31□□□□□ -1.4
RN7SKP235-201ENST00000410662 CAPN5O15484 640 aaPredicted RBP6.31□□□□□ -1.4
RN7SKP235-201ENST00000410662 SPINT1O43278 529 aa6.31□□□□□ -1.4
RN7SKP235-201ENST00000410662 PPP1R12BO60237 982 aaPredicted RBP6.31□□□□□ -1.4
RN7SKP235-201ENST00000410662 RNF144AP50876 292 aaPredicted RBP6.31□□□□□ -1.4
RN7SKP235-201ENST00000410662 HIRAP54198 1017 aaPredicted RBP6.31□□□□□ -1.4
RN7SKP235-201ENST00000410662 ZNF295-AS1Q8N0V1 137 aa6.31□□□□□ -1.4
RN7SKP235-201ENST00000410662 LINC00528Q8N1L1 170 aa6.31□□□□□ -1.4
RN7SKP235-201ENST00000410662 ZNF395Q9H8N7 513 aaPredicted RBP6.31□□□□□ -1.4
RN7SKP235-201ENST00000410662 SLC52A1Q9NWF4 448 aa6.31□□□□□ -1.4
RN7SKP235-201ENST00000410662 HSPA2P54652 639 aa6.3□□□□□ -1.4
RN7SKP235-201ENST00000410662 MFAP1P55081 439 aaKnown RBP6.3□□□□□ -1.4
RN7SKP235-201ENST00000410662 TEAD4Q15561 434 aa6.3□□□□□ -1.4
RN7SKP235-201ENST00000410662 ZSCAN10Q96SZ4 725 aaPredicted RBP6.3□□□□□ -1.4
RN7SKP235-201ENST00000410662 MKNK1Q9BUB5 465 aa6.3□□□□□ -1.4
RN7SKP235-201ENST00000410662 GRIP2Q9C0E4 1043 aa6.3□□□□□ -1.4
RN7SKP235-201ENST00000410662 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.3□□□□□ -1.4
RN7SKP235-201ENST00000410662 CHMP3Q9Y3E7 222 aa6.3□□□□□ -1.4
RN7SKP235-201ENST00000410662 USP3Q9Y6I4 520 aa6.3□□□□□ -1.4
RN7SKP235-201ENST00000410662 DHX57Q6P158 1386 aaKnown RBP6.3□□□□□ -1.4
RN7SKP235-201ENST00000410662 ANKRD30BQ9BXX2 1392 aa6.3□□□□□ -1.4
RN7SKP235-201ENST00000410662 UPP2O95045 317 aa6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 POLR1AO95602 1720 aaPredicted RBP6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 SMCPP49901 116 aaPredicted RBP6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 SF3B2Q13435 895 aaKnown RBP6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 CCDC27Q2M243 656 aa6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 CTC1Q2NKJ3 1217 aa6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 TBCELQ5QJ74 424 aa6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 CAPN12Q6ZSI9 719 aa6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 THEMISQ8N1K5 641 aaPredicted RBP6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 RHBDD1Q8TEB9 315 aa6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 GTF3C2Q8WUA4 911 aaPredicted RBP6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 VTI1AQ96AJ9 217 aa6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 SEPT3Q9UH03 358 aa6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 ADGRB3O60242 1522 aa6.29□□□□□ -1.4
RN7SKP235-201ENST00000410662 SERTM1A2A2V5 107 aa6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 FAM187AA6NFU0 413 aa6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 EML1O00423 815 aa6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 ICMTO60725 284 aa6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 ABL1P00519 1130 aa6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 GTF2E1P29083 439 aaPredicted RBP6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 NOS2P35228 1153 aa6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 HELQQ8TDG4 1101 aa6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 ZDHHC1Q8WTX9 485 aa6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 INSM2Q96T92 566 aaPredicted RBP6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 DNMT3AQ9Y6K1 912 aaPredicted RBP6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 PPLO60437 1756 aa6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 IFT172Q9UG01 1749 aa6.28□□□□□ -1.4
RN7SKP235-201ENST00000410662 CCDC144AA2RUR9 1427 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 SLIT1O75093 1534 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 SPATA31C2B4DYI2 1134 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 NRG2O14511 850 aaPredicted RBP6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 DGAT1O75907 488 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 LTKP29376 864 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 SLC27A3Q5K4L6 730 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 FOXD4L5Q5VV16 416 aaPredicted RBP6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 TMEM214Q6NUQ4 689 aaKnown RBP6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 MRPL14Q6P1L8 145 aaKnown RBP6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 C16orf46Q6P387 395 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 CRIPAKQ8N1N5 446 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 L3MBTL2Q969R5 705 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 MYO19Q96H55 970 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 SIN3AQ96ST3 1273 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 NIFKQ9BYG3 293 aaKnown RBP6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 CABP1Q9NZU7 370 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 ARHGAP23Q9P227 1491 aa6.27□□□□□ -1.41
RN7SKP235-201ENST00000410662 SPATA31E1Q6ZUB1 1445 aa6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 H3BRB1 525 aa6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 NPR3P17342 541 aa6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 CTSOP43234 321 aaPredicted RBP6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 FKBP4Q02790 459 aaKnown RBP eCLIP6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 ZNF211Q13398 564 aaPredicted RBP6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 NAA30Q147X3 362 aaPredicted RBP6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 RGL3Q3MIN7 710 aa6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 GNASQ5JWF2 1037 aa6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 GLYCTKQ8IVS8 523 aa6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 RGS22Q8NE09 1264 aa6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 TUT1Q9H6E5 874 aaKnown RBP6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 QTRT2Q9H974 415 aaKnown RBP6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 POLMQ9NP87 494 aaPredicted RBP6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 TMEM2Q9UHN6 1383 aa6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 NEURL4Q96JN8 1562 aa6.26□□□□□ -1.41
RN7SKP235-201ENST00000410662 ZFYVE9O95405 1425 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 RIMS2Q9UQ26 1411 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 NEXMIFQ5QGS0 1516 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 BMP2P12643 396 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 NEUROD1Q13562 356 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 LAPTM4AQ15012 233 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 ECM1Q16610 540 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 PKDCCQ504Y2 493 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 ZNF326Q5BKZ1 582 aaKnown RBP6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 WDR44Q5JSH3 913 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 COX20Q5RI15 118 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 C1orf53Q5VUE5 145 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 ANKLE2Q86XL3 938 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 RNF217Q8TC41 542 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 ZNF232Q9UNY5 417 aa6.25□□□□□ -1.41
RN7SKP235-201ENST00000410662 IQGAP1P46940 1657 aa6.24□□□□□ -1.41
RN7SKP235-201ENST00000410662 GFRA3O60609 400 aa6.24□□□□□ -1.41
RN7SKP235-201ENST00000410662 FAM13AO94988 1023 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms