RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 CPSF6Q16630 551 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-554P-201ENST00000410466 FAM20CQ8IXL6 584 aa3.42□□□□□ -1.86
RNU6-554P-201ENST00000410466 ZDHHC1Q8WTX9 485 aa3.42□□□□□ -1.86
RNU6-554P-201ENST00000410466 FAM46AQ96IP4 442 aaKnown RBP3.42□□□□□ -1.86
RNU6-554P-201ENST00000410466 HSH2DQ96JZ2 352 aa3.42□□□□□ -1.86
RNU6-554P-201ENST00000410466 FAM84AQ96KN4 292 aa3.42□□□□□ -1.86
RNU6-554P-201ENST00000410466 FAM83CQ9BQN1 747 aa3.42□□□□□ -1.86
RNU6-554P-201ENST00000410466 BSDC1Q9NW68 430 aaPredicted RBP3.42□□□□□ -1.86
RNU6-554P-201ENST00000410466 CTSWP56202 376 aa3.41□□□□□ -1.86
RNU6-554P-201ENST00000410466 TEAD4Q15561 434 aa3.41□□□□□ -1.86
RNU6-554P-201ENST00000410466 BEND4Q6ZU67 534 aa3.41□□□□□ -1.86
RNU6-554P-201ENST00000410466 CILP2Q8IUL8 1156 aa3.41□□□□□ -1.86
RNU6-554P-201ENST00000410466 PROCA1Q8NCQ7 364 aaPredicted RBP3.41□□□□□ -1.86
RNU6-554P-201ENST00000410466 FAM168AQ92567 244 aa3.41□□□□□ -1.86
RNU6-554P-201ENST00000410466 AK7Q96M32 723 aa3.41□□□□□ -1.86
RNU6-554P-201ENST00000410466 MFSD14AQ96MC6 490 aa3.41□□□□□ -1.86
RNU6-554P-201ENST00000410466 OSBPL1AQ9BXW6 950 aa3.41□□□□□ -1.86
RNU6-554P-201ENST00000410466 PAK6Q9NQU5 681 aaPredicted RBP3.41□□□□□ -1.86
RNU6-554P-201ENST00000410466 NOS2P35228 1153 aa3.4□□□□□ -1.87
RNU6-554P-201ENST00000410466 PDE4DQ08499 809 aa3.4□□□□□ -1.87
RNU6-554P-201ENST00000410466 SETDB1Q15047 1291 aa3.4□□□□□ -1.87
RNU6-554P-201ENST00000410466 ACAD11Q709F0 780 aa3.4□□□□□ -1.87
RNU6-554P-201ENST00000410466 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.4□□□□□ -1.87
RNU6-554P-201ENST00000410466 C1QL4Q86Z23 238 aa3.4□□□□□ -1.87
RNU6-554P-201ENST00000410466 C7orf43Q8WVR3 580 aa3.4□□□□□ -1.87
RNU6-554P-201ENST00000410466 TMEM40Q8WWA1 233 aa3.4□□□□□ -1.87
RNU6-554P-201ENST00000410466 SMG9Q9H0W8 520 aaKnown RBP3.4□□□□□ -1.87
RNU6-554P-201ENST00000410466 TMEM229AB2RXF0 380 aa3.39□□□□□ -1.87
RNU6-554P-201ENST00000410466 BMP3P12645 472 aa3.39□□□□□ -1.87
RNU6-554P-201ENST00000410466 CCINQ13939 588 aa3.39□□□□□ -1.87
RNU6-554P-201ENST00000410466 SH3D19Q5HYK7 790 aa3.39□□□□□ -1.87
RNU6-554P-201ENST00000410466 SCHIP1Q9P0W5 487 aaPredicted RBP3.39□□□□□ -1.87
RNU6-554P-201ENST00000410466 SERTM1A2A2V5 107 aa3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 BACH1O14867 736 aa3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 SART1O43290 800 aaKnown RBP3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 INHBBP09529 407 aa3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 EIF2AK2P19525 551 aaKnown RBP3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 MLLT1Q03111 559 aaPredicted RBP3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 PLCL1Q15111 1095 aa3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 ECM1Q16610 540 aa3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 TSGA10IPQ3SY00 556 aa3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 SLFNL1Q499Z3 407 aa3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 FBXL6Q8N531 539 aa3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 GSX2Q9BZM3 304 aa3.38□□□□□ -1.87
RNU6-554P-201ENST00000410466 MAP3K6O95382 1288 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 WISP1O95388 367 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 TSPAN15O95858 294 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 RFC5P40937 340 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 GPLD1P80108 840 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 MESP2Q0VG99 397 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 RTN1Q16799 776 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 ZNF792Q3KQV3 632 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 C1orf53Q5VUE5 145 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 GDF6Q6KF10 455 aaPredicted RBP3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 ATG4DQ86TL0 474 aaPredicted RBP3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 IL22RA1Q8N6P7 574 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 ZNF280CQ8ND82 737 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 TRPM4Q8TD43 1214 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 ZC3H15Q8WU90 426 aaKnown RBP3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 GJD4Q96KN9 370 aaPredicted RBP3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 SUSD3Q96L08 255 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 PPP1R16BQ96T49 567 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 METTL22Q9BUU2 404 aaPredicted RBP3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 HIF3AQ9Y2N7 669 aa3.37□□□□□ -1.87
RNU6-554P-201ENST00000410466 CYP26A1O43174 497 aa3.36□□□□□ -1.87
RNU6-554P-201ENST00000410466 F13BP05160 661 aa3.36□□□□□ -1.87
RNU6-554P-201ENST00000410466 SKIP12755 728 aa3.36□□□□□ -1.87
RNU6-554P-201ENST00000410466 ARID4AP29374 1257 aaPredicted RBP3.36□□□□□ -1.87
RNU6-554P-201ENST00000410466 DHX32Q7L7V1 743 aaKnown RBP3.36□□□□□ -1.87
RNU6-554P-201ENST00000410466 BTLAQ7Z6A9 289 aa3.36□□□□□ -1.87
RNU6-554P-201ENST00000410466 ANKLE2Q86XL3 938 aa3.36□□□□□ -1.87
RNU6-554P-201ENST00000410466 MUC3BQ9H195 1237 aa3.36□□□□□ -1.87
RNU6-554P-201ENST00000410466 LRRC10BA6NIK2 292 aa3.35□□□□□ -1.87
RNU6-554P-201ENST00000410466 ZBTB42B2RXF5 422 aa3.35□□□□□ -1.87
RNU6-554P-201ENST00000410466 SH3PXD2AQ5TCZ1 1133 aa3.35□□□□□ -1.87
RNU6-554P-201ENST00000410466 SLC9A9Q8IVB4 645 aa3.35□□□□□ -1.87
RNU6-554P-201ENST00000410466 PHTF2Q8N3S3 785 aa3.35□□□□□ -1.87
RNU6-554P-201ENST00000410466 PLD4Q96BZ4 506 aa3.35□□□□□ -1.87
RNU6-554P-201ENST00000410466 CD68P34810 354 aaPredicted RBP3.34□□□□□ -1.87
RNU6-554P-201ENST00000410466 HIF1AQ16665 826 aa3.34□□□□□ -1.87
RNU6-554P-201ENST00000410466 TBCELQ5QJ74 424 aa3.34□□□□□ -1.87
RNU6-554P-201ENST00000410466 KIAA1211Q6ZU35 1233 aa3.34□□□□□ -1.87
RNU6-554P-201ENST00000410466 HFE2Q6ZVN8 426 aa3.34□□□□□ -1.87
RNU6-554P-201ENST00000410466 PHACTR1Q9C0D0 580 aa3.34□□□□□ -1.87
RNU6-554P-201ENST00000410466 CHMP3Q9Y3E7 222 aa3.34□□□□□ -1.87
RNU6-554P-201ENST00000410466 GAS2O43903 313 aaKnown RBP3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 EPB42P16452 691 aa3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 PREPP48147 710 aa3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 DUOXA2Q1HG44 320 aa3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 ANKRD34AQ69YU3 496 aa3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 GALNT11Q8NCW6 608 aa3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 RELTQ969Z4 430 aa3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 TMPRSS5Q9H3S3 457 aa3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 RC3H2Q9HBD1 1191 aaKnown RBP3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 CHIC2Q9UKJ5 165 aa3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 SLC5A6Q9Y289 635 aa3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 PPME1Q9Y570 386 aa3.33□□□□□ -1.88
RNU6-554P-201ENST00000410466 IGHA2P01877 340 aa3.32□□□□□ -1.88
RNU6-554P-201ENST00000410466 MAP4P27816 1152 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms