RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 ANKRD13DQ6ZTN6 518 aa19.81■□□□□ 0.76
PDK1-203ENST00000410055 TSPY26PQ9H489 355 aa19.81■□□□□ 0.76
PDK1-203ENST00000410055 NEURL1BA8MQ27 555 aa19.81■□□□□ 0.76
PDK1-203ENST00000410055 SYAP1Q96A49 352 aaPredicted RBP19.81■□□□□ 0.76
PDK1-203ENST00000410055 TAF6LQ9Y6J9 622 aa19.81■□□□□ 0.76
PDK1-203ENST00000410055 NPHP3Q7Z494 1330 aa19.81■□□□□ 0.76
PDK1-203ENST00000410055 MCM5P33992 734 aa19.8■□□□□ 0.76
PDK1-203ENST00000410055 CCDC171Q6TFL3 1326 aa19.8■□□□□ 0.76
PDK1-203ENST00000410055 RPAP1Q9BWH6 1393 aaPredicted RBP19.8■□□□□ 0.76
PDK1-203ENST00000410055 NPHP4O75161 1426 aaPredicted RBP19.8■□□□□ 0.76
PDK1-203ENST00000410055 GCKRQ14397 625 aa19.8■□□□□ 0.76
PDK1-203ENST00000410055 CREB3L3Q68CJ9 461 aa19.8■□□□□ 0.76
PDK1-203ENST00000410055 TUBGCP6Q96RT7 1819 aa19.8■□□□□ 0.76
PDK1-203ENST00000410055 DNM1Q05193 864 aaKnown RBP19.8■□□□□ 0.76
PDK1-203ENST00000410055 PHKG2P15735 406 aa19.79■□□□□ 0.76
PDK1-203ENST00000410055 ME3Q16798 604 aa19.79■□□□□ 0.76
PDK1-203ENST00000410055 FAM173BQ6P4H8 233 aa19.79■□□□□ 0.76
PDK1-203ENST00000410055 RNF216Q9NWF9 866 aaPredicted RBP19.79■□□□□ 0.76
PDK1-203ENST00000410055 ZNF330Q9Y3S2 320 aaPredicted RBP19.79■□□□□ 0.76
PDK1-203ENST00000410055 TIGD1Q96MW7 591 aa19.79■□□□□ 0.76
PDK1-203ENST00000410055 C19orf44Q9H6X5 657 aa19.79■□□□□ 0.76
PDK1-203ENST00000410055 KCNG1Q9UIX4 513 aa19.78■□□□□ 0.76
PDK1-203ENST00000410055 A0A087WZG4 1122 aa19.77■□□□□ 0.76
PDK1-203ENST00000410055 F13A1P00488 732 aa19.77■□□□□ 0.76
PDK1-203ENST00000410055 MYCNP04198 464 aaPredicted RBP19.77■□□□□ 0.76
PDK1-203ENST00000410055 ZNF589Q86UQ0 364 aaPredicted RBP19.77■□□□□ 0.76
PDK1-203ENST00000410055 IFNL2Q8IZJ0 200 aa19.77■□□□□ 0.76
PDK1-203ENST00000410055 PRIMPOLQ96LW4 560 aa19.77■□□□□ 0.76
PDK1-203ENST00000410055 CABP4P57796 275 aa19.77■□□□□ 0.76
PDK1-203ENST00000410055 HMGN5P82970 282 aaKnown RBP19.77■□□□□ 0.76
PDK1-203ENST00000410055 TFCP2Q12800 502 aa19.77■□□□□ 0.76
PDK1-203ENST00000410055 KDM3BQ7LBC6 1761 aa19.77■□□□□ 0.76
PDK1-203ENST00000410055 NECTIN1Q15223 517 aa19.77■□□□□ 0.75
PDK1-203ENST00000410055 TPCN1Q9ULQ1 816 aa19.77■□□□□ 0.75
PDK1-203ENST00000410055 USP42Q9H9J4 1324 aaKnown RBP19.76■□□□□ 0.75
PDK1-203ENST00000410055 MED1Q15648 1581 aaPredicted RBP19.76■□□□□ 0.75
PDK1-203ENST00000410055 CCDC129Q6ZRS4 1044 aa19.76■□□□□ 0.75
PDK1-203ENST00000410055 SLC27A2O14975 620 aa19.76■□□□□ 0.75
PDK1-203ENST00000410055 NEUROD6Q96NK8 337 aa19.76■□□□□ 0.75
PDK1-203ENST00000410055 METTL22Q9BUU2 404 aaPredicted RBP19.76■□□□□ 0.75
PDK1-203ENST00000410055 CYP27B1O15528 508 aa19.75■□□□□ 0.75
PDK1-203ENST00000410055 VPS53Q5VIR6 699 aa19.75■□□□□ 0.75
PDK1-203ENST00000410055 LARP1BQ659C4 914 aaKnown RBP19.75■□□□□ 0.75
PDK1-203ENST00000410055 SEC62Q99442 399 aaKnown RBP19.75■□□□□ 0.75
PDK1-203ENST00000410055 ZSWIM6Q9HCJ5 1215 aa19.75■□□□□ 0.75
PDK1-203ENST00000410055 EPB41L2O43491 1005 aaKnown RBP19.75■□□□□ 0.75
PDK1-203ENST00000410055 SNRPA1P09661 255 aaKnown RBP19.75■□□□□ 0.75
PDK1-203ENST00000410055 BLOC1S2Q6QNY1 142 aa19.75■□□□□ 0.75
PDK1-203ENST00000410055 HCLS1P14317 486 aaPredicted RBP19.74■□□□□ 0.75
PDK1-203ENST00000410055 DDX46Q7L014 1031 aaKnown RBP19.74■□□□□ 0.75
PDK1-203ENST00000410055 SLFNL1Q499Z3 407 aa19.74■□□□□ 0.75
PDK1-203ENST00000410055 GIMAP6Q6P9H5 292 aa19.74■□□□□ 0.75
PDK1-203ENST00000410055 HEG1Q9ULI3 1381 aa19.74■□□□□ 0.75
PDK1-203ENST00000410055 RGPD5Q99666 1765 aa19.74■□□□□ 0.75
PDK1-203ENST00000410055 PPFIA3O75145 1194 aa19.74■□□□□ 0.75
PDK1-203ENST00000410055 SLFN14P0C7P3 912 aa19.74■□□□□ 0.75
PDK1-203ENST00000410055 NOLC1Q14978 699 aaKnown RBP eCLIP19.74■□□□□ 0.75
PDK1-203ENST00000410055 MAP4K1Q92918 833 aa19.74■□□□□ 0.75
PDK1-203ENST00000410055 NCAPD2Q15021 1401 aa19.73■□□□□ 0.75
PDK1-203ENST00000410055 CCDC66A2RUB6 948 aa19.73■□□□□ 0.75
PDK1-203ENST00000410055 FOSBP53539 338 aa19.73■□□□□ 0.75
PDK1-203ENST00000410055 DBNDD2Q9BQY9 259 aa19.73■□□□□ 0.75
PDK1-203ENST00000410055 LRRC2Q9BYS8 371 aa19.73■□□□□ 0.75
PDK1-203ENST00000410055 USP25Q9UHP3 1055 aa19.73■□□□□ 0.75
PDK1-203ENST00000410055 DBNLQ9UJU6 430 aaKnown RBP19.73■□□□□ 0.75
PDK1-203ENST00000410055 PHF14O94880 888 aa19.73■□□□□ 0.75
PDK1-203ENST00000410055 APPP05067 770 aa19.73■□□□□ 0.75
PDK1-203ENST00000410055 GTF2F1P35269 517 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDK1-203ENST00000410055 ST3GAL1Q11201 340 aa19.72■□□□□ 0.75
PDK1-203ENST00000410055 LMBR1LQ6UX01 489 aa19.72■□□□□ 0.75
PDK1-203ENST00000410055 IL17RAQ96F46 866 aa19.72■□□□□ 0.75
PDK1-203ENST00000410055 FMNL2Q96PY5 1086 aa19.72■□□□□ 0.75
PDK1-203ENST00000410055 MTMR6Q9Y217 621 aa19.72■□□□□ 0.75
PDK1-203ENST00000410055 KDM6AO15550 1401 aaPredicted RBP19.72■□□□□ 0.75
PDK1-203ENST00000410055 LMO7Q8WWI1 1683 aa19.72■□□□□ 0.75
PDK1-203ENST00000410055 RNF20Q5VTR2 975 aa19.72■□□□□ 0.75
PDK1-203ENST00000410055 TTC12Q9H892 705 aaPredicted RBP19.72■□□□□ 0.75
PDK1-203ENST00000410055 TFIP11Q9UBB9 837 aaKnown RBP19.72■□□□□ 0.75
PDK1-203ENST00000410055 ATP6V1DQ9Y5K8 247 aa19.72■□□□□ 0.75
PDK1-203ENST00000410055 C1orf167Q5SNV9 1468 aa19.71■□□□□ 0.75
PDK1-203ENST00000410055 HIP1O00291 1037 aa19.71■□□□□ 0.75
PDK1-203ENST00000410055 SLC20A2Q08357 652 aa19.71■□□□□ 0.75
PDK1-203ENST00000410055 CNPY4Q8N129 248 aa19.71■□□□□ 0.75
PDK1-203ENST00000410055 CCDC85AQ96PX6 553 aaPredicted RBP19.71■□□□□ 0.75
PDK1-203ENST00000410055 HSP90B1P14625 803 aaKnown RBP19.71■□□□□ 0.75
PDK1-203ENST00000410055 PSMA5P28066 241 aa19.71■□□□□ 0.75
PDK1-203ENST00000410055 PTPN12Q05209 780 aaKnown RBP19.71■□□□□ 0.75
PDK1-203ENST00000410055 ZSCAN31Q96LW9 406 aaPredicted RBP19.71■□□□□ 0.75
PDK1-203ENST00000410055 ZBTB3Q9H5J0 574 aa19.71■□□□□ 0.75
PDK1-203ENST00000410055 UBE2HP62256 183 aa19.7■□□□□ 0.74
PDK1-203ENST00000410055 TNNI3KQ59H18 835 aa19.7■□□□□ 0.74
PDK1-203ENST00000410055 CCDC183Q5T5S1 534 aa19.7■□□□□ 0.74
PDK1-203ENST00000410055 CDC37L1Q7L3B6 337 aa19.7■□□□□ 0.74
PDK1-203ENST00000410055 FPGT-TNNI3KV9GXZ4 949 aa19.7■□□□□ 0.74
PDK1-203ENST00000410055 CAMK4Q16566 473 aa19.7■□□□□ 0.74
PDK1-203ENST00000410055 TMX1Q9H3N1 280 aa19.7■□□□□ 0.74
PDK1-203ENST00000410055 SH2B1Q9NRF2 756 aaPredicted RBP19.7■□□□□ 0.74
PDK1-203ENST00000410055 OGFRQ9NZT2 677 aa19.7■□□□□ 0.74
PDK1-203ENST00000410055 MEGF6O75095 1541 aa19.69■□□□□ 0.74
PDK1-203ENST00000410055 DCAF5Q96JK2 942 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms