RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 CC2D2BQ6DHV5 1058 aa17.78■□□□□ 0.44
GYPC-203ENST00000409836 TMC4Q7Z404 712 aa17.78■□□□□ 0.44
GYPC-203ENST00000409836 CTSWP56202 376 aa17.77■□□□□ 0.44
GYPC-203ENST00000409836 CCDC93Q567U6 631 aa17.77■□□□□ 0.44
GYPC-203ENST00000409836 SPEF2Q9C093 1822 aa17.77■□□□□ 0.43
GYPC-203ENST00000409836 GRM8O00222 908 aa17.76■□□□□ 0.43
GYPC-203ENST00000409836 GRAPQ13588 217 aa17.76■□□□□ 0.43
GYPC-203ENST00000409836 UBE3BQ7Z3V4 1068 aa17.76■□□□□ 0.43
GYPC-203ENST00000409836 GRAPLQ8TC17 118 aaPredicted RBP17.76■□□□□ 0.43
GYPC-203ENST00000409836 SRCIN1Q9C0H9 1055 aa17.76■□□□□ 0.43
GYPC-203ENST00000409836 PPEF1O14829 653 aaPredicted RBP17.75■□□□□ 0.43
GYPC-203ENST00000409836 C21orf2O43822 256 aa17.75■□□□□ 0.43
GYPC-203ENST00000409836 BBOX1O75936 387 aa17.75■□□□□ 0.43
GYPC-203ENST00000409836 CCDC152Q4G0S7 254 aa17.75■□□□□ 0.43
GYPC-203ENST00000409836 API5Q9BZZ5 524 aaKnown RBP17.75■□□□□ 0.43
GYPC-203ENST00000409836 ATP6V0A2Q9Y487 856 aa17.75■□□□□ 0.43
GYPC-203ENST00000409836 DDX46Q7L014 1031 aaKnown RBP17.74■□□□□ 0.43
GYPC-203ENST00000409836 RTKN2Q8IZC4 609 aa17.74■□□□□ 0.43
GYPC-203ENST00000409836 PSMD1Q99460 953 aa17.74■□□□□ 0.43
GYPC-203ENST00000409836 CSF1RP07333 972 aa17.73■□□□□ 0.43
GYPC-203ENST00000409836 PRELPP51888 382 aa17.73■□□□□ 0.43
GYPC-203ENST00000409836 RTL5Q5HYW3 569 aaPredicted RBP17.73■□□□□ 0.43
GYPC-203ENST00000409836 ARHGAP27Q6ZUM4 889 aa17.73■□□□□ 0.43
GYPC-203ENST00000409836 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
GYPC-203ENST00000409836 TAOK3Q9H2K8 898 aa17.73■□□□□ 0.43
GYPC-203ENST00000409836 NOB1Q9ULX3 412 aaKnown RBP17.73■□□□□ 0.43
GYPC-203ENST00000409836 LMNB1P20700 586 aa17.72■□□□□ 0.43
GYPC-203ENST00000409836 YY1P25490 414 aa17.72■□□□□ 0.43
GYPC-203ENST00000409836 CCT4P50991 539 aaKnown RBP17.72■□□□□ 0.43
GYPC-203ENST00000409836 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
GYPC-203ENST00000409836 RASSF7Q02833 373 aa17.72■□□□□ 0.43
GYPC-203ENST00000409836 IPO8O15397 1037 aaKnown RBP17.71■□□□□ 0.43
GYPC-203ENST00000409836 TRIM27P14373 513 aa17.71■□□□□ 0.43
GYPC-203ENST00000409836 INTS3Q68E01 1043 aaKnown RBP17.71■□□□□ 0.43
GYPC-203ENST00000409836 SLC4A10Q6U841 1118 aa17.71■□□□□ 0.43
GYPC-203ENST00000409836 ATF7IPQ6VMQ6 1270 aa17.71■□□□□ 0.43
GYPC-203ENST00000409836 SP8Q8IXZ3 490 aa17.71■□□□□ 0.43
GYPC-203ENST00000409836 RTFDC1Q9BY42 306 aaPredicted RBP17.71■□□□□ 0.43
GYPC-203ENST00000409836 COL4A5P29400 1685 aa17.71■□□□□ 0.42
GYPC-203ENST00000409836 BCAR3O75815 825 aa17.7■□□□□ 0.42
GYPC-203ENST00000409836 FOXO4P98177 505 aa17.7■□□□□ 0.42
GYPC-203ENST00000409836 RABL6Q3YEC7 729 aaPredicted RBP17.7■□□□□ 0.42
GYPC-203ENST00000409836 CELF1Q92879 486 aaKnown RBP17.7■□□□□ 0.42
GYPC-203ENST00000409836 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
GYPC-203ENST00000409836 JARID2Q92833 1246 aaPredicted RBP17.69■□□□□ 0.42
GYPC-203ENST00000409836 KAZALD1Q96I82 304 aa17.69■□□□□ 0.42
GYPC-203ENST00000409836 USP44Q9H0E7 712 aa17.69■□□□□ 0.42
GYPC-203ENST00000409836 VPS33BQ9H267 617 aa17.69■□□□□ 0.42
GYPC-203ENST00000409836 GREM2Q9H772 168 aa17.69■□□□□ 0.42
GYPC-203ENST00000409836 PSME4Q14997 1843 aa17.68■□□□□ 0.42
GYPC-203ENST00000409836 NBPF7P0C2Y1 421 aaPredicted RBP17.68■□□□□ 0.42
GYPC-203ENST00000409836 RPS8P62241 208 aaKnown RBP17.68■□□□□ 0.42
GYPC-203ENST00000409836 C9orf131Q5VYM1 1079 aa17.68■□□□□ 0.42
GYPC-203ENST00000409836 SLC51AQ86UW1 340 aa17.68■□□□□ 0.42
GYPC-203ENST00000409836 WDR90Q96KV7 1748 aa17.68■□□□□ 0.42
GYPC-203ENST00000409836 CDC5LQ99459 802 aaKnown RBP17.68■□□□□ 0.42
GYPC-203ENST00000409836 SEC31BQ9NQW1 1179 aa17.68■□□□□ 0.42
GYPC-203ENST00000409836 C9orf78Q9NZ63 289 aaPredicted RBP17.68■□□□□ 0.42
GYPC-203ENST00000409836 FAM161AQ3B820 660 aa17.67■□□□□ 0.42
GYPC-203ENST00000409836 PODXL2Q9NZ53 605 aa17.67■□□□□ 0.42
GYPC-203ENST00000409836 RNF181Q9P0P0 153 aa17.67■□□□□ 0.42
GYPC-203ENST00000409836 EPHA10Q5JZY3 1008 aa17.66■□□□□ 0.42
GYPC-203ENST00000409836 ZKSCAN2Q63HK3 967 aa17.66■□□□□ 0.42
GYPC-203ENST00000409836 ZNF784Q8NCA9 323 aaPredicted RBP17.65■□□□□ 0.42
GYPC-203ENST00000409836 SUCLG2Q96I99 432 aa17.65■□□□□ 0.42
GYPC-203ENST00000409836 BSDC1Q9NW68 430 aaPredicted RBP17.65■□□□□ 0.42
GYPC-203ENST00000409836 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
GYPC-203ENST00000409836 ZNF646O15015 1829 aaPredicted RBP17.65■□□□□ 0.42
GYPC-203ENST00000409836 ITGA6P23229 1130 aa17.64■□□□□ 0.41
GYPC-203ENST00000409836 IARSP41252 1262 aaKnown RBP17.64■□□□□ 0.41
GYPC-203ENST00000409836 ANKRD18AQ8IVF6 992 aa17.64■□□□□ 0.41
GYPC-203ENST00000409836 ANKRD44Q8N8A2 993 aa17.64■□□□□ 0.41
GYPC-203ENST00000409836 SUPT20HQ8NEM7 779 aa17.64■□□□□ 0.41
GYPC-203ENST00000409836 TMX4Q9H1E5 349 aaPredicted RBP17.63■□□□□ 0.41
GYPC-203ENST00000409836 RCAN3Q9UKA8 241 aa17.63■□□□□ 0.41
GYPC-203ENST00000409836 SCN4AP35499 1836 aa17.63■□□□□ 0.41
GYPC-203ENST00000409836 KIAA2012Q0VF49 1180 aa17.62■□□□□ 0.41
GYPC-203ENST00000409836 LMBR1LQ6UX01 489 aa17.62■□□□□ 0.41
GYPC-203ENST00000409836 DPP8Q6V1X1 898 aaPredicted RBP17.62■□□□□ 0.41
GYPC-203ENST00000409836 MPNDQ8N594 471 aa17.62■□□□□ 0.41
GYPC-203ENST00000409836 BICC1Q9H694 974 aaKnown RBP17.62■□□□□ 0.41
GYPC-203ENST00000409836 FRAT1Q92837 279 aaPredicted RBP17.61■□□□□ 0.41
GYPC-203ENST00000409836 ZNF277Q9NRM2 450 aaPredicted RBP17.61■□□□□ 0.41
GYPC-203ENST00000409836 HDAC5Q9UQL6 1122 aa17.61■□□□□ 0.41
GYPC-203ENST00000409836 TNNQ9UQP3 1299 aa17.61■□□□□ 0.41
GYPC-203ENST00000409836 XDHP47989 1333 aa17.61■□□□□ 0.41
GYPC-203ENST00000409836 ZNF609O15014 1411 aa17.61■□□□□ 0.41
GYPC-203ENST00000409836 SCN9AQ15858 1988 aa17.6■□□□□ 0.41
GYPC-203ENST00000409836 ANKRD18BA2A2Z9 1011 aa17.6■□□□□ 0.41
GYPC-203ENST00000409836 FZD9O00144 591 aa17.6■□□□□ 0.41
GYPC-203ENST00000409836 UBTFL1P0CB47 393 aaPredicted RBP17.6■□□□□ 0.41
GYPC-203ENST00000409836 GPSM2P81274 684 aa17.6■□□□□ 0.41
GYPC-203ENST00000409836 IFIT5Q13325 482 aaKnown RBP17.6■□□□□ 0.41
GYPC-203ENST00000409836 MTX1Q13505 466 aa17.6■□□□□ 0.41
GYPC-203ENST00000409836 CCDC85AQ96PX6 553 aaPredicted RBP17.6■□□□□ 0.41
GYPC-203ENST00000409836 MEIS3Q99687 375 aa17.6■□□□□ 0.41
GYPC-203ENST00000409836 MED23Q9ULK4 1368 aa17.59■□□□□ 0.41
GYPC-203ENST00000409836 GNAI3P08754 354 aa17.59■□□□□ 0.41
GYPC-203ENST00000409836 RLBP1P12271 317 aa17.59■□□□□ 0.41
GYPC-203ENST00000409836 IGHMBP2P38935 993 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms