RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 CUL5Q93034 780 aa11.91□□□□□ -0.5
POLR1A-203ENST00000409681 DDX49Q9Y6V7 483 aaKnown RBP11.91□□□□□ -0.5
POLR1A-203ENST00000409681 CDK12Q9NYV4 1490 aaPredicted RBP11.91□□□□□ -0.5
POLR1A-203ENST00000409681 GNAT2P19087 354 aa11.91□□□□□ -0.5
POLR1A-203ENST00000409681 CRKLP46109 303 aaKnown RBP11.91□□□□□ -0.5
POLR1A-203ENST00000409681 TPM3P06753 285 aa11.91□□□□□ -0.5
POLR1A-203ENST00000409681 IL27Q8NEV9 243 aa11.91□□□□□ -0.5
POLR1A-203ENST00000409681 TRIM35Q9UPQ4 493 aa11.91□□□□□ -0.5
POLR1A-203ENST00000409681 TMEM132AQ24JP5 1023 aa11.9□□□□□ -0.5
POLR1A-203ENST00000409681 DIP2AQ14689 1571 aa11.9□□□□□ -0.5
POLR1A-203ENST00000409681 PIK3C2BO00750 1634 aa11.9□□□□□ -0.5
POLR1A-203ENST00000409681 F8W031 263 aaPredicted RBP11.9□□□□□ -0.5
POLR1A-203ENST00000409681 EYA2O00167 538 aa11.9□□□□□ -0.5
POLR1A-203ENST00000409681 SPATA31D1Q6ZQQ2 1576 aa11.9□□□□□ -0.5
POLR1A-203ENST00000409681 USP31Q70CQ4 1352 aa11.9□□□□□ -0.5
POLR1A-203ENST00000409681 KIF5BP33176 963 aa11.9□□□□□ -0.5
POLR1A-203ENST00000409681 PUM3Q15397 648 aaKnown RBP11.9□□□□□ -0.5
POLR1A-203ENST00000409681 CATIPQ7Z7H3 387 aa11.9□□□□□ -0.5
POLR1A-203ENST00000409681 GJA3Q9Y6H8 435 aa11.9□□□□□ -0.5
POLR1A-203ENST00000409681 TMC4Q7Z404 712 aa11.9□□□□□ -0.51
POLR1A-203ENST00000409681 C2CD5Q86YS7 1000 aa11.9□□□□□ -0.51
POLR1A-203ENST00000409681 VEZTQ9HBM0 779 aa11.9□□□□□ -0.51
POLR1A-203ENST00000409681 ATP2B1P20020 1258 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 HIBADHP31937 336 aaKnown RBP11.89□□□□□ -0.51
POLR1A-203ENST00000409681 VSIG10Q8N0Z9 540 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 MPNDQ8N594 471 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 FRMPD1Q5SYB0 1578 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 TSPY2A6NKD2 308 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 CRB1P82279 1406 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 TTC41PQ6P2S7 1318 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 WDR78Q5VTH9 848 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 MFSD6Q6ZSS7 791 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 WWC3Q9ULE0 1092 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 BCS1LQ9Y276 419 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 DCCP43146 1447 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 C20orf194Q5TEA3 1177 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 BICC1Q9H694 974 aaKnown RBP11.89□□□□□ -0.51
POLR1A-203ENST00000409681 SETD1BQ9UPS6 1966 aaKnown RBP11.89□□□□□ -0.51
POLR1A-203ENST00000409681 KDM4AO75164 1064 aa11.89□□□□□ -0.51
POLR1A-203ENST00000409681 MROH5Q6ZUA9 1318 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 KRT18P05783 430 aaKnown RBP11.88□□□□□ -0.51
POLR1A-203ENST00000409681 MSL1Q68DK7 614 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 ADAMTS13Q76LX8 1427 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 MAP3K15Q6ZN16 1313 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 SLC27A3Q5K4L6 730 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 PRPF40BQ6NWY9 871 aaKnown RBP11.88□□□□□ -0.51
POLR1A-203ENST00000409681 WDR66Q8TBY9 1149 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 HMG20BQ9P0W2 317 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 ASAP1Q9ULH1 1129 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 SLC12A7Q9Y666 1083 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 GCKRQ14397 625 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 CCDC12Q8WUD4 166 aaPredicted RBP11.88□□□□□ -0.51
POLR1A-203ENST00000409681 FER1L4A9Z1Z3 1794 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 IFIT3O14879 490 aaKnown RBP11.88□□□□□ -0.51
POLR1A-203ENST00000409681 STK38Q15208 465 aa11.88□□□□□ -0.51
POLR1A-203ENST00000409681 RBM26Q5T8P6 1007 aaKnown RBP11.88□□□□□ -0.51
POLR1A-203ENST00000409681 IQSEC3Q9UPP2 1182 aaPredicted RBP11.88□□□□□ -0.51
POLR1A-203ENST00000409681 MADDQ8WXG6 1647 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 NCAPD2Q15021 1401 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 MAGEB6P1A0A0J9YX57 407 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 STK3Q13188 491 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 USPL1Q5W0Q7 1092 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 TBC1D22AQ8WUA7 517 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 GZF1Q9H116 711 aaPredicted RBP11.87□□□□□ -0.51
POLR1A-203ENST00000409681 KAT14Q9H8E8 782 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 CNNM2Q9H8M5 875 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 RPS8P62241 208 aaKnown RBP11.87□□□□□ -0.51
POLR1A-203ENST00000409681 HELBQ8NG08 1087 aaPredicted RBP11.87□□□□□ -0.51
POLR1A-203ENST00000409681 KRT23Q9C075 422 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 USP19O94966 1318 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 CPSF1Q10570 1443 aaKnown RBP11.87□□□□□ -0.51
POLR1A-203ENST00000409681 CASTP20810 708 aaKnown RBP11.87□□□□□ -0.51
POLR1A-203ENST00000409681 SLC9C2Q5TAH2 1124 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 SLC4A4Q9Y6R1 1079 aa11.87□□□□□ -0.51
POLR1A-203ENST00000409681 TTC6Q86TZ1 520 aa11.86□□□□□ -0.51
POLR1A-203ENST00000409681 PAG1Q9NWQ8 432 aa11.86□□□□□ -0.51
POLR1A-203ENST00000409681 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
POLR1A-203ENST00000409681 TRPM1Q7Z4N2 1603 aa11.86□□□□□ -0.51
POLR1A-203ENST00000409681 NCOA7Q8NI08 942 aa11.86□□□□□ -0.51
POLR1A-203ENST00000409681 ADRA2BP18089 450 aa11.86□□□□□ -0.51
POLR1A-203ENST00000409681 TMTC2Q8N394 836 aa11.86□□□□□ -0.51
POLR1A-203ENST00000409681 PPIP5K2O43314 1243 aa11.85□□□□□ -0.51
POLR1A-203ENST00000409681 PCCAP05165 728 aaPredicted RBP11.85□□□□□ -0.51
POLR1A-203ENST00000409681 MSNP26038 577 aaKnown RBP11.85□□□□□ -0.51
POLR1A-203ENST00000409681 TFCP2Q12800 502 aa11.85□□□□□ -0.51
POLR1A-203ENST00000409681 ESR2Q92731 530 aa11.85□□□□□ -0.51
POLR1A-203ENST00000409681 NEXMIFQ5QGS0 1516 aa11.85□□□□□ -0.51
POLR1A-203ENST00000409681 ATP2B4P23634 1241 aa11.85□□□□□ -0.51
POLR1A-203ENST00000409681 G2E3Q7L622 706 aa11.85□□□□□ -0.51
POLR1A-203ENST00000409681 LPIN2Q92539 896 aa11.85□□□□□ -0.51
POLR1A-203ENST00000409681 PREX1Q8TCU6 1659 aa11.85□□□□□ -0.51
POLR1A-203ENST00000409681 CPS1P31327 1500 aa11.85□□□□□ -0.51
POLR1A-203ENST00000409681 BMP2KLQ5H9B9 411 aa11.85□□□□□ -0.51
POLR1A-203ENST00000409681 CNKSR2Q8WXI2 1034 aa11.85□□□□□ -0.51
POLR1A-203ENST00000409681 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
POLR1A-203ENST00000409681 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
POLR1A-203ENST00000409681 PA2G4Q9UQ80 394 aaKnown RBP11.85□□□□□ -0.51
POLR1A-203ENST00000409681 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms