RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 CWC25Q9NXE8 425 aaPredicted RBP25.19■■□□□ 1.62
TSPAN4-209ENST00000409543 PI4KAP2A4QPH2 592 aa25.18■■□□□ 1.62
TSPAN4-209ENST00000409543 IQCA1LA6NCM1 817 aa25.18■■□□□ 1.62
TSPAN4-209ENST00000409543 PCCAP05165 728 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-209ENST00000409543 PI4KAP1Q8N8J0 262 aa25.18■■□□□ 1.62
TSPAN4-209ENST00000409543 SUPT20HQ8NEM7 779 aa25.18■■□□□ 1.62
TSPAN4-209ENST00000409543 RTFDC1Q9BY42 306 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-209ENST00000409543 VAMP4O75379 141 aa25.17■■□□□ 1.62
TSPAN4-209ENST00000409543 TAF1P21675 1872 aa25.17■■□□□ 1.62
TSPAN4-209ENST00000409543 COL4A5P29400 1685 aa25.17■■□□□ 1.62
TSPAN4-209ENST00000409543 EXOSC9Q06265 439 aaKnown RBP25.16■■□□□ 1.62
TSPAN4-209ENST00000409543 DPP8Q6V1X1 898 aaPredicted RBP25.16■■□□□ 1.62
TSPAN4-209ENST00000409543 G2E3Q7L622 706 aa25.16■■□□□ 1.62
TSPAN4-209ENST00000409543 GPC2Q8N158 579 aa25.16■■□□□ 1.62
TSPAN4-209ENST00000409543 MPNDQ8N594 471 aa25.16■■□□□ 1.62
TSPAN4-209ENST00000409543 SPINK5Q9NQ38 1064 aaPredicted RBP25.16■■□□□ 1.62
TSPAN4-209ENST00000409543 SCN4AP35499 1836 aa25.16■■□□□ 1.62
TSPAN4-209ENST00000409543 PPIP5K2O43314 1243 aa25.15■■□□□ 1.62
TSPAN4-209ENST00000409543 EIF6P56537 245 aaKnown RBP25.15■■□□□ 1.62
TSPAN4-209ENST00000409543 MYH16Q9H6N6 1097 aa25.15■■□□□ 1.62
TSPAN4-209ENST00000409543 IGKV5-2P06315 115 aa25.14■■□□□ 1.62
TSPAN4-209ENST00000409543 NEXNQ0ZGT2 675 aa25.14■■□□□ 1.62
TSPAN4-209ENST00000409543 NIM1KQ8IY84 436 aa25.14■■□□□ 1.62
TSPAN4-209ENST00000409543 CELF1Q92879 486 aaKnown RBP25.14■■□□□ 1.62
TSPAN4-209ENST00000409543 TAF1DQ9H5J8 278 aaPredicted RBP25.14■■□□□ 1.62
TSPAN4-209ENST00000409543 AOC3Q16853 763 aa25.13■■□□□ 1.61
TSPAN4-209ENST00000409543 CACNA1FO60840 1977 aa25.13■■□□□ 1.61
TSPAN4-209ENST00000409543 PDE8AO60658 829 aa25.12■■□□□ 1.61
TSPAN4-209ENST00000409543 FLIIQ13045 1269 aa25.12■■□□□ 1.61
TSPAN4-209ENST00000409543 HACL1Q9UJ83 578 aa25.12■■□□□ 1.61
TSPAN4-209ENST00000409543 LRRC37AA6NMS7 1700 aa25.12■■□□□ 1.61
TSPAN4-209ENST00000409543 RPS8P62241 208 aaKnown RBP25.11■■□□□ 1.61
TSPAN4-209ENST00000409543 CHADLQ6NUI6 762 aa25.11■■□□□ 1.61
TSPAN4-209ENST00000409543 DNAJC5GQ8N7S2 189 aa25.11■■□□□ 1.61
TSPAN4-209ENST00000409543 JARID2Q92833 1246 aaPredicted RBP25.11■■□□□ 1.61
TSPAN4-209ENST00000409543 ZNF521Q96K83 1311 aa25.11■■□□□ 1.61
TSPAN4-209ENST00000409543 CDHR2Q9BYE9 1310 aa25.11■■□□□ 1.61
TSPAN4-209ENST00000409543 KIAA2012Q0VF49 1180 aa25.1■■□□□ 1.61
TSPAN4-209ENST00000409543 CCDC152Q4G0S7 254 aa25.1■■□□□ 1.61
TSPAN4-209ENST00000409543 GJA3Q9Y6H8 435 aa25.1■■□□□ 1.61
TSPAN4-209ENST00000409543 NEURL1BA8MQ27 555 aa25.09■■□□□ 1.61
TSPAN4-209ENST00000409543 POTEIP0CG38 1075 aa25.09■■□□□ 1.61
TSPAN4-209ENST00000409543 POTEJP0CG39 1038 aa25.09■■□□□ 1.61
TSPAN4-209ENST00000409543 EPHX2P34913 555 aa25.09■■□□□ 1.61
TSPAN4-209ENST00000409543 LDHDQ86WU2 507 aa25.09■■□□□ 1.61
TSPAN4-209ENST00000409543 ZNRF3Q9ULT6 936 aa25.09■■□□□ 1.61
TSPAN4-209ENST00000409543 FKBP5Q13451 457 aaPredicted RBP25.08■■□□□ 1.61
TSPAN4-209ENST00000409543 CWF19L2Q2TBE0 894 aaKnown RBP25.08■■□□□ 1.61
TSPAN4-209ENST00000409543 SEC31BQ9NQW1 1179 aa25.08■■□□□ 1.61
TSPAN4-209ENST00000409543 COL4A1P02462 1669 aa25.07■■□□□ 1.6
TSPAN4-209ENST00000409543 HTRA3P83110 453 aa25.07■■□□□ 1.6
TSPAN4-209ENST00000409543 PNMA8AQ86V59 439 aaPredicted RBP25.07■■□□□ 1.6
TSPAN4-209ENST00000409543 NSFL1CQ9UNZ2 370 aaKnown RBP25.07■■□□□ 1.6
TSPAN4-209ENST00000409543 DUOX1Q9NRD9 1551 aa25.06■■□□□ 1.6
TSPAN4-209ENST00000409543 DNAAF4Q8WXU2 420 aa25.06■■□□□ 1.6
TSPAN4-209ENST00000409543 H7C1W4 665 aa25.05■■□□□ 1.6
TSPAN4-209ENST00000409543 GPSM2P81274 684 aa25.05■■□□□ 1.6
TSPAN4-209ENST00000409543 CXCL9Q07325 125 aa25.05■■□□□ 1.6
TSPAN4-209ENST00000409543 EAPPQ56P03 285 aaPredicted RBP25.05■■□□□ 1.6
TSPAN4-209ENST00000409543 LMOD1P29536 600 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-209ENST00000409543 SCNN1DP51172 638 aa25.04■■□□□ 1.6
TSPAN4-209ENST00000409543 CTSWP56202 376 aa25.04■■□□□ 1.6
TSPAN4-209ENST00000409543 GCKRQ14397 625 aa25.04■■□□□ 1.6
TSPAN4-209ENST00000409543 LINS1Q8NG48 757 aa25.04■■□□□ 1.6
TSPAN4-209ENST00000409543 WASHC4Q2M389 1173 aa25.03■■□□□ 1.6
TSPAN4-209ENST00000409543 CCDC85AQ96PX6 553 aaPredicted RBP25.03■■□□□ 1.6
TSPAN4-209ENST00000409543 POLLQ9UGP5 575 aa25.03■■□□□ 1.6
TSPAN4-209ENST00000409543 C6orf229H3BNL8 230 aa25.02■■□□□ 1.6
TSPAN4-209ENST00000409543 UBE3BQ7Z3V4 1068 aa25.02■■□□□ 1.6
TSPAN4-209ENST00000409543 TTLL11Q8NHH1 800 aa25.02■■□□□ 1.6
TSPAN4-209ENST00000409543 PODXL2Q9NZ53 605 aa25.02■■□□□ 1.6
TSPAN4-209ENST00000409543 ADAMTSL1Q8N6G6 1762 aa25.02■■□□□ 1.6
TSPAN4-209ENST00000409543 LTBP1Q14766 1721 aa25.01■■□□□ 1.59
TSPAN4-209ENST00000409543 CCER2I3L3R5 266 aa25.01■■□□□ 1.59
TSPAN4-209ENST00000409543 CIAPIN1Q6FI81 312 aa25.01■■□□□ 1.59
TSPAN4-209ENST00000409543 ANKRD18AQ8IVF6 992 aa25.01■■□□□ 1.59
TSPAN4-209ENST00000409543 KLRG1Q96E93 195 aa25.01■■□□□ 1.59
TSPAN4-209ENST00000409543 EYA3Q99504 573 aa25.01■■□□□ 1.59
TSPAN4-209ENST00000409543 CLEC11AQ9Y240 323 aa25.01■■□□□ 1.59
TSPAN4-209ENST00000409543 EPS15P42566 896 aa25■■□□□ 1.59
TSPAN4-209ENST00000409543 TNIP1Q15025 636 aa25■■□□□ 1.59
TSPAN4-209ENST00000409543 TBC1D16Q8TBP0 767 aa25■■□□□ 1.59
TSPAN4-209ENST00000409543 CDC5LQ99459 802 aaKnown RBP25■■□□□ 1.59
TSPAN4-209ENST00000409543 RTL9Q8NET4 1388 aa25■■□□□ 1.59
TSPAN4-209ENST00000409543 MYH3P11055 1940 aa24.99■■□□□ 1.59
TSPAN4-209ENST00000409543 PLA2G12BQ9BX93 195 aa24.99■■□□□ 1.59
TSPAN4-209ENST00000409543 GPRC5DQ9NZD1 345 aa24.99■■□□□ 1.59
TSPAN4-209ENST00000409543 PASKQ96RG2 1323 aa24.98■■□□□ 1.59
TSPAN4-209ENST00000409543 YDJCA8MPS7 323 aa24.98■■□□□ 1.59
TSPAN4-209ENST00000409543 E9PSI1 815 aa24.98■■□□□ 1.59
TSPAN4-209ENST00000409543 RIMBP2O15034 1052 aa24.98■■□□□ 1.59
TSPAN4-209ENST00000409543 RAD17O75943 681 aa24.98■■□□□ 1.59
TSPAN4-209ENST00000409543 ITGBL1O95965 494 aaPredicted RBP24.98■■□□□ 1.59
TSPAN4-209ENST00000409543 CASP7P55210 303 aa24.98■■□□□ 1.59
TSPAN4-209ENST00000409543 GREM2Q9H772 168 aa24.98■■□□□ 1.59
TSPAN4-209ENST00000409543 ANKIB1Q9P2G1 1089 aa24.98■■□□□ 1.59
TSPAN4-209ENST00000409543 F6X3S4 739 aa24.97■■□□□ 1.59
TSPAN4-209ENST00000409543 USP50Q70EL3 339 aaPredicted RBP24.97■■□□□ 1.59
TSPAN4-209ENST00000409543 GMPSP49915 693 aaPredicted RBP24.96■■□□□ 1.59
TSPAN4-209ENST00000409543 BEND3Q5T5X7 828 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms