RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 RPGRQ92834 1020 aaKnown RBP10.28□□□□□ -0.76
LSM5-202ENST00000409292 ZNF277Q9NRM2 450 aaPredicted RBP10.28□□□□□ -0.76
LSM5-202ENST00000409292 SCN4AP35499 1836 aa10.28□□□□□ -0.76
LSM5-202ENST00000409292 FOXN1O15353 648 aa10.27□□□□□ -0.77
LSM5-202ENST00000409292 PER1O15534 1290 aaPredicted RBP10.27□□□□□ -0.77
LSM5-202ENST00000409292 KIF6Q6ZMV9 814 aa10.27□□□□□ -0.77
LSM5-202ENST00000409292 CNTROBQ8N137 903 aa10.27□□□□□ -0.77
LSM5-202ENST00000409292 SYNE4Q8N205 404 aa10.27□□□□□ -0.77
LSM5-202ENST00000409292 HS3ST6Q96QI5 342 aa10.27□□□□□ -0.77
LSM5-202ENST00000409292 USP16Q9Y5T5 823 aa10.27□□□□□ -0.77
LSM5-202ENST00000409292 PASKQ96RG2 1323 aa10.27□□□□□ -0.77
LSM5-202ENST00000409292 CEMIPQ8WUJ3 1361 aa10.26□□□□□ -0.77
LSM5-202ENST00000409292 ANKRD31Q8N7Z5 1873 aa10.26□□□□□ -0.77
LSM5-202ENST00000409292 VEGFBP49765 207 aa10.26□□□□□ -0.77
LSM5-202ENST00000409292 C7orf43Q8WVR3 580 aa10.26□□□□□ -0.77
LSM5-202ENST00000409292 GJA3Q9Y6H8 435 aa10.26□□□□□ -0.77
LSM5-202ENST00000409292 KLRG2A4D1S0 409 aaPredicted RBP10.25□□□□□ -0.77
LSM5-202ENST00000409292 TAF7Q15545 349 aaPredicted RBP10.25□□□□□ -0.77
LSM5-202ENST00000409292 LARGE2Q8N3Y3 721 aa10.25□□□□□ -0.77
LSM5-202ENST00000409292 RBM17Q96I25 401 aaKnown RBP10.25□□□□□ -0.77
LSM5-202ENST00000409292 PSMD1Q99460 953 aa10.25□□□□□ -0.77
LSM5-202ENST00000409292 PNNQ9H307 717 aaKnown RBP10.25□□□□□ -0.77
LSM5-202ENST00000409292 RYDENQ9NUL5 291 aaKnown RBP10.25□□□□□ -0.77
LSM5-202ENST00000409292 WBP1LQ9NX94 342 aa10.25□□□□□ -0.77
LSM5-202ENST00000409292 SLX4Q8IY92 1834 aa10.25□□□□□ -0.77
LSM5-202ENST00000409292 RNF123Q5XPI4 1314 aa10.25□□□□□ -0.77
LSM5-202ENST00000409292 COL11A2P13942 1736 aaPredicted RBP10.24□□□□□ -0.77
LSM5-202ENST00000409292 RASSF10A6NK89 507 aa10.24□□□□□ -0.77
LSM5-202ENST00000409292 FZD9O00144 591 aa10.24□□□□□ -0.77
LSM5-202ENST00000409292 KCNQ3O43525 872 aa10.24□□□□□ -0.77
LSM5-202ENST00000409292 ITGBL1O95965 494 aaPredicted RBP10.24□□□□□ -0.77
LSM5-202ENST00000409292 PIP4K2AP48426 406 aaPredicted RBP10.24□□□□□ -0.77
LSM5-202ENST00000409292 LBX1P52954 281 aa10.24□□□□□ -0.77
LSM5-202ENST00000409292 MAP1SQ66K74 1059 aaPredicted RBP10.24□□□□□ -0.77
LSM5-202ENST00000409292 MCM10Q7L590 875 aa10.24□□□□□ -0.77
LSM5-202ENST00000409292 NIM1KQ8IY84 436 aa10.24□□□□□ -0.77
LSM5-202ENST00000409292 TMC2Q8TDI7 906 aa10.24□□□□□ -0.77
LSM5-202ENST00000409292 PHACTR3Q96KR7 559 aa10.24□□□□□ -0.77
LSM5-202ENST00000409292 RSPH6AQ9H0K4 717 aa10.24□□□□□ -0.77
LSM5-202ENST00000409292 WDR33Q9C0J8 1336 aaKnown RBP10.24□□□□□ -0.77
LSM5-202ENST00000409292 ZNF541Q9H0D2 1346 aa10.24□□□□□ -0.77
LSM5-202ENST00000409292 ARFGEF2Q9Y6D5 1785 aa10.24□□□□□ -0.77
LSM5-202ENST00000409292 CACNA1SQ13698 1873 aa10.23□□□□□ -0.77
LSM5-202ENST00000409292 ERVV-1B6SEH8 477 aa10.23□□□□□ -0.77
LSM5-202ENST00000409292 USP50Q70EL3 339 aaPredicted RBP10.23□□□□□ -0.77
LSM5-202ENST00000409292 PPP1R42Q7Z4L9 355 aa10.23□□□□□ -0.77
LSM5-202ENST00000409292 NGEFQ8N5V2 710 aa10.23□□□□□ -0.77
LSM5-202ENST00000409292 SUPT20HQ8NEM7 779 aa10.23□□□□□ -0.77
LSM5-202ENST00000409292 C2orf72A6NCS6 295 aa10.22□□□□□ -0.77
LSM5-202ENST00000409292 GRM1Q13255 1194 aa10.22□□□□□ -0.77
LSM5-202ENST00000409292 VPS33BQ9H267 617 aa10.22□□□□□ -0.77
LSM5-202ENST00000409292 DDX21Q9NR30 783 aaKnown RBP eCLIP10.22□□□□□ -0.77
LSM5-202ENST00000409292 COL3A1P02461 1466 aaPredicted RBP10.22□□□□□ -0.77
LSM5-202ENST00000409292 SIPA1L3O60292 1781 aaPredicted RBP10.21□□□□□ -0.77
LSM5-202ENST00000409292 BCORQ6W2J9 1755 aa10.21□□□□□ -0.77
LSM5-202ENST00000409292 PPEF1O14829 653 aaPredicted RBP10.21□□□□□ -0.77
LSM5-202ENST00000409292 CA12O43570 354 aa10.21□□□□□ -0.77
LSM5-202ENST00000409292 PPP1R37O75864 691 aa10.21□□□□□ -0.77
LSM5-202ENST00000409292 CRY2Q49AN0 593 aa10.21□□□□□ -0.77
LSM5-202ENST00000409292 PARP10Q53GL7 1025 aa10.21□□□□□ -0.77
LSM5-202ENST00000409292 NLRP3Q96P20 1036 aa10.21□□□□□ -0.77
LSM5-202ENST00000409292 CRAMP1Q96RY5 1269 aa10.21□□□□□ -0.77
LSM5-202ENST00000409292 RRP7AQ9Y3A4 280 aaKnown RBP10.21□□□□□ -0.77
LSM5-202ENST00000409292 MAP3K15Q6ZN16 1313 aa10.21□□□□□ -0.78
LSM5-202ENST00000409292 PRAMEF22A3QJZ6 481 aa10.2□□□□□ -0.78
LSM5-202ENST00000409292 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
LSM5-202ENST00000409292 PPIP5K2O43314 1243 aa10.2□□□□□ -0.78
LSM5-202ENST00000409292 HSPA8P11142 646 aaKnown RBP10.2□□□□□ -0.78
LSM5-202ENST00000409292 HOXA10P31260 410 aaPredicted RBP10.2□□□□□ -0.78
LSM5-202ENST00000409292 HLFQ16534 295 aa10.2□□□□□ -0.78
LSM5-202ENST00000409292 GPR153Q6NV75 609 aa10.2□□□□□ -0.78
LSM5-202ENST00000409292 NBPF10Q6P3W6 841 aaKnown RBP10.2□□□□□ -0.78
LSM5-202ENST00000409292 NUTM1Q86Y26 1132 aa10.2□□□□□ -0.78
LSM5-202ENST00000409292 NBPF15Q8N660 670 aa10.2□□□□□ -0.78
LSM5-202ENST00000409292 ABHD8Q96I13 439 aa10.2□□□□□ -0.78
LSM5-202ENST00000409292 CAPNS2Q96L46 248 aa10.2□□□□□ -0.78
LSM5-202ENST00000409292 GPR101Q96P66 508 aaPredicted RBP10.2□□□□□ -0.78
LSM5-202ENST00000409292 MAPK8IP3Q9UPT6 1336 aa10.2□□□□□ -0.78
LSM5-202ENST00000409292 IBTKQ9P2D0 1353 aaPredicted RBP10.19□□□□□ -0.78
LSM5-202ENST00000409292 ERBB4Q15303 1308 aa10.19□□□□□ -0.78
LSM5-202ENST00000409292 POTEB3A0JP26 581 aa10.19□□□□□ -0.78
LSM5-202ENST00000409292 CCDC85CA6NKD9 419 aa10.19□□□□□ -0.78
LSM5-202ENST00000409292 TCERG1O14776 1098 aaKnown RBP10.19□□□□□ -0.78
LSM5-202ENST00000409292 MYL6BP14649 208 aa10.19□□□□□ -0.78
LSM5-202ENST00000409292 GPTP24298 496 aa10.19□□□□□ -0.78
LSM5-202ENST00000409292 MAP2K2P36507 400 aa10.19□□□□□ -0.78
LSM5-202ENST00000409292 DCTN1Q14203 1278 aa10.19□□□□□ -0.78
LSM5-202ENST00000409292 TNIP1Q15025 636 aa10.19□□□□□ -0.78
LSM5-202ENST00000409292 POTEBQ6S5H4 581 aa10.19□□□□□ -0.78
LSM5-202ENST00000409292 OLFM4Q6UX06 510 aa10.19□□□□□ -0.78
LSM5-202ENST00000409292 BCL2L13Q9BXK5 485 aa10.19□□□□□ -0.78
LSM5-202ENST00000409292 ADARB2Q9NS39 739 aaKnown RBP10.19□□□□□ -0.78
LSM5-202ENST00000409292 PPP2R1AP30153 589 aa10.18□□□□□ -0.78
LSM5-202ENST00000409292 MLLT1Q03111 559 aaPredicted RBP10.18□□□□□ -0.78
LSM5-202ENST00000409292 HSP90AB3PQ58FF7 597 aa10.18□□□□□ -0.78
LSM5-202ENST00000409292 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
LSM5-202ENST00000409292 ZBTB3Q9H5J0 574 aa10.18□□□□□ -0.78
LSM5-202ENST00000409292 ZNRF3Q9ULT6 936 aa10.18□□□□□ -0.78
LSM5-202ENST00000409292 RIC1Q4ADV7 1423 aa10.17□□□□□ -0.78
LSM5-202ENST00000409292 CDHR2Q9BYE9 1310 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms