RNA–Protein interactions for RNA: ENST00000409036.5

RAPGEF4-204, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5 BASIC

Gene RAPGEF4, Length 3,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-204ENST00000409036 BCL9O00512 1426 aa7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 GOLGA6L6A8MZA4 724 aa7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 ZKSCAN1P17029 563 aaPredicted RBP7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 BICD2Q8TD16 824 aa7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 MYD88Q99836 296 aa7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 USP25Q9UHP3 1055 aa7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 CDHR2Q9BYE9 1310 aa7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 H3BQV1 296 aa7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 CEBPZQ03701 1054 aaKnown RBP7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 STK3Q13188 491 aa7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 IFFO2Q5TF58 517 aa7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 KIF6Q6ZMV9 814 aa7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 BARGINQ6ZT62 677 aa7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 INTS4Q96HW7 963 aaKnown RBP7.55□□□□□ -1.2
RAPGEF4-204ENST00000409036 SLC39A6Q13433 755 aa7.54□□□□□ -1.2
RAPGEF4-204ENST00000409036 LRRFIP1Q32MZ4 808 aaKnown RBP7.54□□□□□ -1.2
RAPGEF4-204ENST00000409036 TMX3Q96JJ7 454 aa7.54□□□□□ -1.2
RAPGEF4-204ENST00000409036 BICC1Q9H694 974 aaKnown RBP7.54□□□□□ -1.2
RAPGEF4-204ENST00000409036 SGSM2O43147 1006 aa7.54□□□□□ -1.2
RAPGEF4-204ENST00000409036 HMGB2P26583 209 aaKnown RBP7.54□□□□□ -1.2
RAPGEF4-204ENST00000409036 CASP7P55210 303 aa7.54□□□□□ -1.2
RAPGEF4-204ENST00000409036 RBSNQ9H1K0 784 aa7.54□□□□□ -1.2
RAPGEF4-204ENST00000409036 SLIT2O94813 1529 aa7.54□□□□□ -1.2
RAPGEF4-204ENST00000409036 ERVV-1B6SEH8 477 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 FAM184AQ8NB25 1140 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 KCNB2Q92953 911 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 ISCA1Q9BUE6 129 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 TM6SF1Q9BZW5 370 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 USP16Q9Y5T5 823 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 EXOC5O00471 708 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 TOM1O60784 492 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 HSPA4P34932 840 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 CAMK4Q16566 473 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 SIL1Q9H173 461 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 JCADQ9P266 1359 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 BECN2A8MW95 431 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 NPHP1O15259 732 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 IL15P40933 162 aaPredicted RBP7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 CWF19L2Q2TBE0 894 aaKnown RBP7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 CHMP4CQ96CF2 233 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 BTG4Q9NY30 223 aa7.53□□□□□ -1.2
RAPGEF4-204ENST00000409036 FSD2A1L4K1 749 aa7.52□□□□□ -1.2
RAPGEF4-204ENST00000409036 FAM177BA6PVY3 158 aa7.52□□□□□ -1.2
RAPGEF4-204ENST00000409036 GOLGA6L19H0YKK7 550 aa7.52□□□□□ -1.2
RAPGEF4-204ENST00000409036 MYL6BP14649 208 aa7.52□□□□□ -1.2
RAPGEF4-204ENST00000409036 ATP5JP18859 108 aa7.52□□□□□ -1.2
RAPGEF4-204ENST00000409036 CCDC83Q8IWF9 413 aa7.52□□□□□ -1.2
RAPGEF4-204ENST00000409036 DOT1LQ8TEK3 1739 aa7.52□□□□□ -1.2
RAPGEF4-204ENST00000409036 SMARCC1Q92922 1105 aaPredicted RBP7.52□□□□□ -1.2
RAPGEF4-204ENST00000409036 WDR33Q9C0J8 1336 aaKnown RBP7.52□□□□□ -1.2
RAPGEF4-204ENST00000409036 HMG20BQ9P0W2 317 aa7.52□□□□□ -1.2
RAPGEF4-204ENST00000409036 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.52□□□□□ -1.2
RAPGEF4-204ENST00000409036 ANXA1P04083 346 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 PCCAP05165 728 aaPredicted RBP7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 RFX5P48382 616 aaPredicted RBP7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 KAZALD1Q96I82 304 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 TRIM5Q9C035 493 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 ALDH8A1Q9H2A2 487 aaPredicted RBP7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 LAMB2P55268 1798 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 SPATA31A1Q5TZJ5 1347 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 HCLS1P14317 486 aaPredicted RBP7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 CASTP20810 708 aaKnown RBP7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 TCIRG1Q13488 830 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 AACSQ86V21 672 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 JAKMIP1Q96N16 626 aaKnown RBP7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 STRN4Q9NRL3 753 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 A0A087WZG4 1122 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 PRAMEF22A3QJZ6 481 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 RNF20Q5VTR2 975 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 AKAP2Q9Y2D5 859 aa7.52□□□□□ -1.21
RAPGEF4-204ENST00000409036 LRP5O75197 1615 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 PALLDQ8WX93 1383 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 MAP3K15Q6ZN16 1313 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 KDM4AO75164 1064 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 IL6STP40189 918 aaPredicted RBP7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 CUL4AQ13619 759 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 SF3A1Q15459 793 aaKnown RBP7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 ZSCAN31Q96LW9 406 aaPredicted RBP7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 PDCL3Q9H2J4 239 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 TTC12Q9H892 705 aaPredicted RBP7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 NBPF26B4DH59 902 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 PPFIA3O75145 1194 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 PSMA5P28066 241 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 NBPF14Q5TI25 921 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 NBPF10Q6P3W6 841 aaKnown RBP7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 NBPF15Q8N660 670 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 CBX1P83916 185 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 GNL2Q13823 731 aaKnown RBP7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 KRT32Q14532 448 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 LARP1BQ659C4 914 aaKnown RBP7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 FSD1Q9BTV5 496 aa7.51□□□□□ -1.21
RAPGEF4-204ENST00000409036 SASH1O94885 1247 aa7.5□□□□□ -1.21
RAPGEF4-204ENST00000409036 PTPN12Q05209 780 aaKnown RBP7.5□□□□□ -1.21
RAPGEF4-204ENST00000409036 TNNI3KQ59H18 835 aa7.5□□□□□ -1.21
RAPGEF4-204ENST00000409036 PRPF40BQ6NWY9 871 aaKnown RBP7.5□□□□□ -1.21
RAPGEF4-204ENST00000409036 GIMAP6Q6P9H5 292 aa7.5□□□□□ -1.21
RAPGEF4-204ENST00000409036 SASS6Q6UVJ0 657 aa7.5□□□□□ -1.21
RAPGEF4-204ENST00000409036 LRSAM1Q6UWE0 723 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms