RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 ZNF428Q96B54 188 aa23.71■■□□□ 1.39
PTPN18-203ENST00000409022 L3MBTL3Q96JM7 780 aaPredicted RBP23.71■■□□□ 1.39
PTPN18-203ENST00000409022 DICER1Q9UPY3 1922 aaKnown RBP23.71■■□□□ 1.39
PTPN18-203ENST00000409022 NIM1KQ8IY84 436 aa23.7■■□□□ 1.38
PTPN18-203ENST00000409022 CCDC88AQ3V6T2 1871 aa23.7■■□□□ 1.38
PTPN18-203ENST00000409022 PPIP5K2O43314 1243 aa23.69■■□□□ 1.38
PTPN18-203ENST00000409022 GPC2Q8N158 579 aa23.69■■□□□ 1.38
PTPN18-203ENST00000409022 WDR90Q96KV7 1748 aa23.69■■□□□ 1.38
PTPN18-203ENST00000409022 POTECB2RU33 542 aa23.68■■□□□ 1.38
PTPN18-203ENST00000409022 EXOSC9Q06265 439 aaKnown RBP23.68■■□□□ 1.38
PTPN18-203ENST00000409022 CCDC152Q4G0S7 254 aa23.68■■□□□ 1.38
PTPN18-203ENST00000409022 RTFDC1Q9BY42 306 aaPredicted RBP23.68■■□□□ 1.38
PTPN18-203ENST00000409022 ZNF541Q9H0D2 1346 aa23.67■■□□□ 1.38
PTPN18-203ENST00000409022 PDE8AO60658 829 aa23.67■■□□□ 1.38
PTPN18-203ENST00000409022 VAMP4O75379 141 aa23.67■■□□□ 1.38
PTPN18-203ENST00000409022 FLIIQ13045 1269 aa23.67■■□□□ 1.38
PTPN18-203ENST00000409022 HACL1Q9UJ83 578 aa23.67■■□□□ 1.38
PTPN18-203ENST00000409022 FKBP5Q13451 457 aaPredicted RBP23.66■■□□□ 1.38
PTPN18-203ENST00000409022 CDHR2Q9BYE9 1310 aa23.64■■□□□ 1.38
PTPN18-203ENST00000409022 LMOD1P29536 600 aaPredicted RBP23.64■■□□□ 1.37
PTPN18-203ENST00000409022 RPS8P62241 208 aaKnown RBP23.64■■□□□ 1.37
PTPN18-203ENST00000409022 AOC3Q16853 763 aa23.64■■□□□ 1.37
PTPN18-203ENST00000409022 CHADLQ6NUI6 762 aa23.64■■□□□ 1.37
PTPN18-203ENST00000409022 PNMA8AQ86V59 439 aaPredicted RBP23.64■■□□□ 1.37
PTPN18-203ENST00000409022 GJA3Q9Y6H8 435 aa23.64■■□□□ 1.37
PTPN18-203ENST00000409022 G2E3Q7L622 706 aa23.63■■□□□ 1.37
PTPN18-203ENST00000409022 CELF1Q92879 486 aaKnown RBP23.63■■□□□ 1.37
PTPN18-203ENST00000409022 TAF1DQ9H5J8 278 aaPredicted RBP23.63■■□□□ 1.37
PTPN18-203ENST00000409022 ZNRF3Q9ULT6 936 aa23.63■■□□□ 1.37
PTPN18-203ENST00000409022 IGKV5-2P06315 115 aa23.62■■□□□ 1.37
PTPN18-203ENST00000409022 KIAA2012Q0VF49 1180 aa23.62■■□□□ 1.37
PTPN18-203ENST00000409022 LDHDQ86WU2 507 aa23.62■■□□□ 1.37
PTPN18-203ENST00000409022 DNAAF4Q8WXU2 420 aa23.62■■□□□ 1.37
PTPN18-203ENST00000409022 NSFL1CQ9UNZ2 370 aaKnown RBP23.62■■□□□ 1.37
PTPN18-203ENST00000409022 NEURL1BA8MQ27 555 aa23.61■■□□□ 1.37
PTPN18-203ENST00000409022 CCER2I3L3R5 266 aa23.61■■□□□ 1.37
PTPN18-203ENST00000409022 EPHX2P34913 555 aa23.61■■□□□ 1.37
PTPN18-203ENST00000409022 EYA3Q99504 573 aa23.61■■□□□ 1.37
PTPN18-203ENST00000409022 SPINK5Q9NQ38 1064 aaPredicted RBP23.6■■□□□ 1.37
PTPN18-203ENST00000409022 CWF19L2Q2TBE0 894 aaKnown RBP23.59■■□□□ 1.37
PTPN18-203ENST00000409022 EAPPQ56P03 285 aaPredicted RBP23.59■■□□□ 1.37
PTPN18-203ENST00000409022 LINS1Q8NG48 757 aa23.59■■□□□ 1.37
PTPN18-203ENST00000409022 CDC5LQ99459 802 aaKnown RBP23.59■■□□□ 1.37
PTPN18-203ENST00000409022 LAMB2P55268 1798 aa23.59■■□□□ 1.37
PTPN18-203ENST00000409022 DDX60Q8IY21 1712 aaKnown RBP23.59■■□□□ 1.37
PTPN18-203ENST00000409022 E9PSI1 815 aa23.58■■□□□ 1.37
PTPN18-203ENST00000409022 C6orf229H3BNL8 230 aa23.58■■□□□ 1.37
PTPN18-203ENST00000409022 CTSWP56202 376 aa23.58■■□□□ 1.37
PTPN18-203ENST00000409022 TNIP1Q15025 636 aa23.58■■□□□ 1.37
PTPN18-203ENST00000409022 WASHC4Q2M389 1173 aa23.58■■□□□ 1.37
PTPN18-203ENST00000409022 SLC51AQ86UW1 340 aa23.58■■□□□ 1.37
PTPN18-203ENST00000409022 ANKRD18AQ8IVF6 992 aa23.58■■□□□ 1.37
PTPN18-203ENST00000409022 CLEC11AQ9Y240 323 aa23.58■■□□□ 1.37
PTPN18-203ENST00000409022 ZNF521Q96K83 1311 aa23.58■■□□□ 1.36
PTPN18-203ENST00000409022 GCKRQ14397 625 aa23.57■■□□□ 1.36
PTPN18-203ENST00000409022 JARID2Q92833 1246 aaPredicted RBP23.57■■□□□ 1.36
PTPN18-203ENST00000409022 CEP350Q5VT06 3117 aa23.57■■□□□ 1.36
PTPN18-203ENST00000409022 H7C1W4 665 aa23.56■■□□□ 1.36
PTPN18-203ENST00000409022 CIAPIN1Q6FI81 312 aa23.56■■□□□ 1.36
PTPN18-203ENST00000409022 UBE3BQ7Z3V4 1068 aa23.56■■□□□ 1.36
PTPN18-203ENST00000409022 SEC31BQ9NQW1 1179 aa23.56■■□□□ 1.36
PTPN18-203ENST00000409022 ANKIB1Q9P2G1 1089 aa23.56■■□□□ 1.36
PTPN18-203ENST00000409022 SCN4AP35499 1836 aa23.56■■□□□ 1.36
PTPN18-203ENST00000409022 GPSM2P81274 684 aa23.55■■□□□ 1.36
PTPN18-203ENST00000409022 CCDC85AQ96PX6 553 aaPredicted RBP23.55■■□□□ 1.36
PTPN18-203ENST00000409022 CXCL9Q07325 125 aa23.54■■□□□ 1.36
PTPN18-203ENST00000409022 ZC3H12CQ9C0D7 883 aaKnown RBP23.54■■□□□ 1.36
PTPN18-203ENST00000409022 PODXL2Q9NZ53 605 aa23.54■■□□□ 1.36
PTPN18-203ENST00000409022 G3V3G9 751 aa23.53■■□□□ 1.36
PTPN18-203ENST00000409022 POTEIP0CG38 1075 aa23.53■■□□□ 1.36
PTPN18-203ENST00000409022 POTEJP0CG39 1038 aa23.53■■□□□ 1.36
PTPN18-203ENST00000409022 DCAF8Q5TAQ9 597 aa23.53■■□□□ 1.36
PTPN18-203ENST00000409022 TTLL11Q8NHH1 800 aa23.53■■□□□ 1.36
PTPN18-203ENST00000409022 BCL2L13Q9BXK5 485 aa23.53■■□□□ 1.36
PTPN18-203ENST00000409022 GGA1Q9UJY5 639 aa23.53■■□□□ 1.36
PTPN18-203ENST00000409022 COL4A5P29400 1685 aa23.53■■□□□ 1.36
PTPN18-203ENST00000409022 RTL9Q8NET4 1388 aa23.52■■□□□ 1.36
PTPN18-203ENST00000409022 SCNN1DP51172 638 aa23.52■■□□□ 1.36
PTPN18-203ENST00000409022 USP50Q70EL3 339 aaPredicted RBP23.52■■□□□ 1.36
PTPN18-203ENST00000409022 TBC1D16Q8TBP0 767 aa23.52■■□□□ 1.36
PTPN18-203ENST00000409022 PLA2G12BQ9BX93 195 aa23.52■■□□□ 1.36
PTPN18-203ENST00000409022 UFL1O94874 794 aa23.51■■□□□ 1.35
PTPN18-203ENST00000409022 IGHMBP2P38935 993 aaKnown RBP23.51■■□□□ 1.35
PTPN18-203ENST00000409022 DNAJC5GQ8N7S2 189 aa23.51■■□□□ 1.35
PTPN18-203ENST00000409022 KLRG1Q96E93 195 aa23.51■■□□□ 1.35
PTPN18-203ENST00000409022 POLLQ9UGP5 575 aa23.51■■□□□ 1.35
PTPN18-203ENST00000409022 XDHP47989 1333 aa23.51■■□□□ 1.35
PTPN18-203ENST00000409022 LRRC37AA6NMS7 1700 aa23.5■■□□□ 1.35
PTPN18-203ENST00000409022 RIMBP2O15034 1052 aa23.5■■□□□ 1.35
PTPN18-203ENST00000409022 RAD17O75943 681 aa23.5■■□□□ 1.35
PTPN18-203ENST00000409022 GREM2Q9H772 168 aa23.5■■□□□ 1.35
PTPN18-203ENST00000409022 ADARB2Q9NS39 739 aaKnown RBP23.5■■□□□ 1.35
PTPN18-203ENST00000409022 BSDC1Q9NW68 430 aaPredicted RBP23.5■■□□□ 1.35
PTPN18-203ENST00000409022 GPRC5DQ9NZD1 345 aa23.5■■□□□ 1.35
PTPN18-203ENST00000409022 ATP2B4P23634 1241 aa23.49■■□□□ 1.35
PTPN18-203ENST00000409022 EPS15P42566 896 aa23.49■■□□□ 1.35
PTPN18-203ENST00000409022 BEND3Q5T5X7 828 aa23.49■■□□□ 1.35
PTPN18-203ENST00000409022 CREBZFQ9NS37 354 aa23.49■■□□□ 1.35
PTPN18-203ENST00000409022 CACNA1FO60840 1977 aa23.49■■□□□ 1.35
PTPN18-203ENST00000409022 F6X3S4 739 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms