RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 RBM17Q96I25 401 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-202ENST00000409020 NLRP3Q96P20 1036 aa12.46□□□□□ -0.41
NIF3L1-202ENST00000409020 WDR90Q96KV7 1748 aa12.46□□□□□ -0.42
NIF3L1-202ENST00000409020 VEGFAP15692 232 aaPredicted RBP12.45□□□□□ -0.42
NIF3L1-202ENST00000409020 IARSP41252 1262 aaKnown RBP12.45□□□□□ -0.42
NIF3L1-202ENST00000409020 CCDC27Q2M243 656 aa12.45□□□□□ -0.42
NIF3L1-202ENST00000409020 RTKN2Q8IZC4 609 aa12.45□□□□□ -0.42
NIF3L1-202ENST00000409020 CRAMP1Q96RY5 1269 aa12.45□□□□□ -0.42
NIF3L1-202ENST00000409020 ABCB7O75027 752 aa12.45□□□□□ -0.42
NIF3L1-202ENST00000409020 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
NIF3L1-202ENST00000409020 SH3TC1Q8TE82 1336 aa12.44□□□□□ -0.42
NIF3L1-202ENST00000409020 TAF1P21675 1872 aa12.44□□□□□ -0.42
NIF3L1-202ENST00000409020 DPY19L2Q6NUT2 758 aa12.44□□□□□ -0.42
NIF3L1-202ENST00000409020 RIC3Q7Z5B4 369 aa12.44□□□□□ -0.42
NIF3L1-202ENST00000409020 HOMEZQ8IX15 550 aa12.44□□□□□ -0.42
NIF3L1-202ENST00000409020 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
NIF3L1-202ENST00000409020 JARID2Q92833 1246 aaPredicted RBP12.44□□□□□ -0.42
NIF3L1-202ENST00000409020 PSMD1Q99460 953 aa12.44□□□□□ -0.42
NIF3L1-202ENST00000409020 MYD88Q99836 296 aa12.44□□□□□ -0.42
NIF3L1-202ENST00000409020 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
NIF3L1-202ENST00000409020 G2E3Q7L622 706 aa12.43□□□□□ -0.42
NIF3L1-202ENST00000409020 RBM19Q9Y4C8 960 aaKnown RBP12.43□□□□□ -0.42
NIF3L1-202ENST00000409020 APLP1P51693 650 aa12.42□□□□□ -0.42
NIF3L1-202ENST00000409020 C1QBPQ07021 282 aaKnown RBP12.42□□□□□ -0.42
NIF3L1-202ENST00000409020 GOLGA2Q08379 1002 aa12.42□□□□□ -0.42
NIF3L1-202ENST00000409020 FSTL1Q12841 308 aa12.42□□□□□ -0.42
NIF3L1-202ENST00000409020 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
NIF3L1-202ENST00000409020 ATP6V0A2Q9Y487 856 aa12.42□□□□□ -0.42
NIF3L1-202ENST00000409020 FZD9O00144 591 aa12.42□□□□□ -0.42
NIF3L1-202ENST00000409020 SMC1BQ8NDV3 1235 aa12.42□□□□□ -0.42
NIF3L1-202ENST00000409020 CELF1Q92879 486 aaKnown RBP12.42□□□□□ -0.42
NIF3L1-202ENST00000409020 TRIM28Q13263 835 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-202ENST00000409020 AOC3Q16853 763 aa12.41□□□□□ -0.42
NIF3L1-202ENST00000409020 TWISTNBQ3B726 338 aaPredicted RBP12.41□□□□□ -0.42
NIF3L1-202ENST00000409020 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
NIF3L1-202ENST00000409020 DUOX1Q9NRD9 1551 aa12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 IL16Q14005 1332 aa12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 PI4KAP2A4QPH2 592 aa12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 IRS4O14654 1257 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 GRAPQ13588 217 aa12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 AAMPQ13685 434 aa12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 DDX46Q7L014 1031 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 PI4KAP1Q8N8J0 262 aa12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 GRAPLQ8TC17 118 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 MAP3K2Q9Y2U5 619 aa12.4□□□□□ -0.42
NIF3L1-202ENST00000409020 LTBP1Q14766 1721 aa12.39□□□□□ -0.43
NIF3L1-202ENST00000409020 IGKV5-2P06315 115 aa12.39□□□□□ -0.43
NIF3L1-202ENST00000409020 LARGE2Q8N3Y3 721 aa12.39□□□□□ -0.43
NIF3L1-202ENST00000409020 CCDC85AQ96PX6 553 aaPredicted RBP12.39□□□□□ -0.43
NIF3L1-202ENST00000409020 METTL22Q9BUU2 404 aaPredicted RBP12.39□□□□□ -0.43
NIF3L1-202ENST00000409020 TAF1DQ9H5J8 278 aaPredicted RBP12.39□□□□□ -0.43
NIF3L1-202ENST00000409020 GJA3Q9Y6H8 435 aa12.39□□□□□ -0.43
NIF3L1-202ENST00000409020 PPIP5K2O43314 1243 aa12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 BBOX1O75936 387 aa12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 EXOSC9Q06265 439 aaKnown RBP12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 SF3B3Q15393 1217 aaKnown RBP12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 DPP8Q6V1X1 898 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 SP8Q8IXZ3 490 aa12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 ZBTB38Q8NAP3 1195 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 SEC31BQ9NQW1 1179 aa12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 CWF19L2Q2TBE0 894 aaKnown RBP12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 JDP2Q8WYK2 163 aa12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 GPR101Q96P66 508 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 RTFDC1Q9BY42 306 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 ZMYND15Q9H091 742 aa12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 CWC25Q9NXE8 425 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-202ENST00000409020 LRRC37AA6NMS7 1700 aa12.37□□□□□ -0.43
NIF3L1-202ENST00000409020 VAMP4O75379 141 aa12.37□□□□□ -0.43
NIF3L1-202ENST00000409020 EAPPQ56P03 285 aaPredicted RBP12.37□□□□□ -0.43
NIF3L1-202ENST00000409020 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
NIF3L1-202ENST00000409020 WDR63Q8IWG1 891 aa12.37□□□□□ -0.43
NIF3L1-202ENST00000409020 GPC2Q8N158 579 aa12.37□□□□□ -0.43
NIF3L1-202ENST00000409020 MPNDQ8N594 471 aa12.37□□□□□ -0.43
NIF3L1-202ENST00000409020 CCDC191Q8NCU4 936 aa12.37□□□□□ -0.43
NIF3L1-202ENST00000409020 DDX58O95786 925 aaKnown RBP12.36□□□□□ -0.43
NIF3L1-202ENST00000409020 PCCAP05165 728 aaPredicted RBP12.36□□□□□ -0.43
NIF3L1-202ENST00000409020 EPHX2P34913 555 aa12.36□□□□□ -0.43
NIF3L1-202ENST00000409020 SCNN1DP51172 638 aa12.36□□□□□ -0.43
NIF3L1-202ENST00000409020 GPSM2P81274 684 aa12.36□□□□□ -0.43
NIF3L1-202ENST00000409020 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
NIF3L1-202ENST00000409020 STK31Q9BXU1 1019 aa12.36□□□□□ -0.43
NIF3L1-202ENST00000409020 HACL1Q9UJ83 578 aa12.36□□□□□ -0.43
NIF3L1-202ENST00000409020 IQCA1LA6NCM1 817 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 EIF6P56537 245 aaKnown RBP12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 FLIIQ13045 1269 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 NIM1KQ8IY84 436 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 POLLQ9UGP5 575 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 SCN4AP35499 1836 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 ADAMTSL1Q8N6G6 1762 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 YDJCA8MPS7 323 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 NEURL1BA8MQ27 555 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 EPS15P42566 896 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 CXCL9Q07325 125 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 KIAA2012Q0VF49 1180 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 KLRG1Q96E93 195 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 TMX4Q9H1E5 349 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms