RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 GJA3Q9Y6H8 435 aa16.48■□□□□ 0.23
SNORD88B-201ENST00000408454 IRS4O14654 1257 aaPredicted RBP16.47■□□□□ 0.23
SNORD88B-201ENST00000408454 KIAA2012Q0VF49 1180 aa16.47■□□□□ 0.23
SNORD88B-201ENST00000408454 WDR63Q8IWG1 891 aa16.47■□□□□ 0.23
SNORD88B-201ENST00000408454 MYH16Q9H6N6 1097 aa16.47■□□□□ 0.23
SNORD88B-201ENST00000408454 TMEM88BA6NKF7 163 aa16.46■□□□□ 0.23
SNORD88B-201ENST00000408454 TCERG1O14776 1098 aaKnown RBP16.46■□□□□ 0.23
SNORD88B-201ENST00000408454 KRT24Q2M2I5 525 aa16.46■□□□□ 0.23
SNORD88B-201ENST00000408454 CDC5LQ99459 802 aaKnown RBP16.46■□□□□ 0.23
SNORD88B-201ENST00000408454 BCL2L13Q9BXK5 485 aa16.46■□□□□ 0.23
SNORD88B-201ENST00000408454 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 POTECB2RU33 542 aa16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 PDE8AO60658 829 aa16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 PCCAP05165 728 aaPredicted RBP16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 TWISTNBQ3B726 338 aaPredicted RBP16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 CIAPIN1Q6FI81 312 aa16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 KSR2Q6VAB6 950 aa16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 WWC1Q8IX03 1113 aa16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 FAM89AQ96GI7 184 aa16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 METTL22Q9BUU2 404 aaPredicted RBP16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 ADARB2Q9NS39 739 aaKnown RBP16.45■□□□□ 0.22
SNORD88B-201ENST00000408454 ATP5J2-PTCD1G3V325 749 aa16.44■□□□□ 0.22
SNORD88B-201ENST00000408454 ELL2O00472 640 aaPredicted RBP16.44■□□□□ 0.22
SNORD88B-201ENST00000408454 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
SNORD88B-201ENST00000408454 AOC3Q16853 763 aa16.44■□□□□ 0.22
SNORD88B-201ENST00000408454 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
SNORD88B-201ENST00000408454 C6orf229H3BNL8 230 aa16.43■□□□□ 0.22
SNORD88B-201ENST00000408454 H7C1D1 291 aa16.43■□□□□ 0.22
SNORD88B-201ENST00000408454 RPS12P25398 132 aaKnown RBP16.43■□□□□ 0.22
SNORD88B-201ENST00000408454 ZC3H15Q8WU90 426 aaKnown RBP16.43■□□□□ 0.22
SNORD88B-201ENST00000408454 AIDAQ96BJ3 306 aa16.43■□□□□ 0.22
SNORD88B-201ENST00000408454 MYD88Q99836 296 aa16.43■□□□□ 0.22
SNORD88B-201ENST00000408454 ZC3H12CQ9C0D7 883 aaKnown RBP16.43■□□□□ 0.22
SNORD88B-201ENST00000408454 ECE1P42892 770 aa16.42■□□□□ 0.22
SNORD88B-201ENST00000408454 OLFM4Q6UX06 510 aa16.42■□□□□ 0.22
SNORD88B-201ENST00000408454 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
SNORD88B-201ENST00000408454 CNTROBQ8N137 903 aa16.42■□□□□ 0.22
SNORD88B-201ENST00000408454 IFFO2Q5TF58 517 aa16.41■□□□□ 0.22
SNORD88B-201ENST00000408454 GPRC5DQ9NZD1 345 aa16.41■□□□□ 0.22
SNORD88B-201ENST00000408454 ANKIB1Q9P2G1 1089 aa16.41■□□□□ 0.22
SNORD88B-201ENST00000408454 MAP3K2Q9Y2U5 619 aa16.41■□□□□ 0.22
SNORD88B-201ENST00000408454 MMP14P50281 582 aa16.4■□□□□ 0.22
SNORD88B-201ENST00000408454 C8orf58Q8NAV2 365 aa16.4■□□□□ 0.22
SNORD88B-201ENST00000408454 DPF2Q92785 391 aa16.4■□□□□ 0.22
SNORD88B-201ENST00000408454 GGA1Q9UJY5 639 aa16.4■□□□□ 0.22
SNORD88B-201ENST00000408454 LAMB2P55268 1798 aa16.4■□□□□ 0.22
SNORD88B-201ENST00000408454 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
SNORD88B-201ENST00000408454 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
SNORD88B-201ENST00000408454 C3orf67Q6ZVT6 689 aa16.39■□□□□ 0.21
SNORD88B-201ENST00000408454 BEGAINQ9BUH8 593 aa16.39■□□□□ 0.21
SNORD88B-201ENST00000408454 PHAXQ9H814 394 aaKnown RBP16.39■□□□□ 0.21
SNORD88B-201ENST00000408454 PODXL2Q9NZ53 605 aa16.39■□□□□ 0.21
SNORD88B-201ENST00000408454 XDHP47989 1333 aa16.39■□□□□ 0.21
SNORD88B-201ENST00000408454 PI4KAP2A4QPH2 592 aa16.38■□□□□ 0.21
SNORD88B-201ENST00000408454 SCNN1DP51172 638 aa16.38■□□□□ 0.21
SNORD88B-201ENST00000408454 CXCL9Q07325 125 aa16.38■□□□□ 0.21
SNORD88B-201ENST00000408454 FKBP5Q13451 457 aaPredicted RBP16.38■□□□□ 0.21
SNORD88B-201ENST00000408454 PI4KAP1Q8N8J0 262 aa16.38■□□□□ 0.21
SNORD88B-201ENST00000408454 ABT1Q9ULW3 272 aaKnown RBP16.38■□□□□ 0.21
SNORD88B-201ENST00000408454 CNTNAP1P78357 1384 aa16.38■□□□□ 0.21
SNORD88B-201ENST00000408454 RTL9Q8NET4 1388 aa16.38■□□□□ 0.21
SNORD88B-201ENST00000408454 LRRC37AA6NMS7 1700 aa16.37■□□□□ 0.21
SNORD88B-201ENST00000408454 ATP2B4P23634 1241 aa16.37■□□□□ 0.21
SNORD88B-201ENST00000408454 IGHMBP2P38935 993 aaKnown RBP16.37■□□□□ 0.21
SNORD88B-201ENST00000408454 MAP2K1Q02750 393 aaPredicted RBP16.37■□□□□ 0.21
SNORD88B-201ENST00000408454 RTL5Q5HYW3 569 aaPredicted RBP16.37■□□□□ 0.21
SNORD88B-201ENST00000408454 DDX60Q8IY21 1712 aaKnown RBP16.36■□□□□ 0.21
SNORD88B-201ENST00000408454 ITGBL1O95965 494 aaPredicted RBP16.36■□□□□ 0.21
SNORD88B-201ENST00000408454 CTSWP56202 376 aa16.36■□□□□ 0.21
SNORD88B-201ENST00000408454 FLIIQ13045 1269 aa16.36■□□□□ 0.21
SNORD88B-201ENST00000408454 DEFB115Q30KQ5 88 aa16.36■□□□□ 0.21
SNORD88B-201ENST00000408454 LINS1Q8NG48 757 aa16.36■□□□□ 0.21
SNORD88B-201ENST00000408454 TSR2Q969E8 191 aaKnown RBP16.36■□□□□ 0.21
SNORD88B-201ENST00000408454 ANKRD2Q9GZV1 360 aa16.36■□□□□ 0.21
SNORD88B-201ENST00000408454 UFL1O94874 794 aa16.35■□□□□ 0.21
SNORD88B-201ENST00000408454 GMPSP49915 693 aaPredicted RBP16.35■□□□□ 0.21
SNORD88B-201ENST00000408454 MAP1SQ66K74 1059 aaPredicted RBP16.35■□□□□ 0.21
SNORD88B-201ENST00000408454 CDC37L1Q7L3B6 337 aa16.35■□□□□ 0.21
SNORD88B-201ENST00000408454 PODNQ7Z5L7 613 aa16.35■□□□□ 0.21
SNORD88B-201ENST00000408454 DNAAF4Q8WXU2 420 aa16.35■□□□□ 0.21
SNORD88B-201ENST00000408454 CELF1Q92879 486 aaKnown RBP16.35■□□□□ 0.21
SNORD88B-201ENST00000408454 ZNF428Q96B54 188 aa16.35■□□□□ 0.21
SNORD88B-201ENST00000408454 MPHOSPH8Q99549 860 aa16.35■□□□□ 0.21
SNORD88B-201ENST00000408454 FANCIQ9NVI1 1328 aa16.35■□□□□ 0.21
SNORD88B-201ENST00000408454 RASSF10A6NK89 507 aa16.34■□□□□ 0.21
SNORD88B-201ENST00000408454 EPS15P42566 896 aa16.34■□□□□ 0.21
SNORD88B-201ENST00000408454 TBC1D16Q8TBP0 767 aa16.34■□□□□ 0.21
SNORD88B-201ENST00000408454 MKRN1Q9UHC7 482 aaKnown RBP16.34■□□□□ 0.21
SNORD88B-201ENST00000408454 CNOT7Q9UIV1 285 aaKnown RBP16.34■□□□□ 0.21
SNORD88B-201ENST00000408454 MYO3BQ8WXR4 1341 aa16.34■□□□□ 0.21
SNORD88B-201ENST00000408454 NEURL1BA8MQ27 555 aa16.33■□□□□ 0.2
SNORD88B-201ENST00000408454 ECE2O60344 883 aa16.33■□□□□ 0.2
SNORD88B-201ENST00000408454 RAD17O75943 681 aa16.33■□□□□ 0.2
SNORD88B-201ENST00000408454 POTEIP0CG38 1075 aa16.33■□□□□ 0.2
SNORD88B-201ENST00000408454 POTEJP0CG39 1038 aa16.33■□□□□ 0.2
SNORD88B-201ENST00000408454 HSPA1AP0DMV8 641 aaKnown RBP16.33■□□□□ 0.2
SNORD88B-201ENST00000408454 HSPA1BP0DMV9 641 aaKnown RBP16.33■□□□□ 0.2
SNORD88B-201ENST00000408454 HTRA3P83110 453 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms