RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 CCDC85AQ96PX6 553 aaPredicted RBP21.15■□□□□ 0.98
HMGA1P7-201ENST00000406908 CSF1RP07333 972 aa21.14■□□□□ 0.97
HMGA1P7-201ENST00000406908 TTLL6Q8N841 843 aa21.14■□□□□ 0.97
HMGA1P7-201ENST00000406908 CNKSR1Q969H4 720 aa21.14■□□□□ 0.97
HMGA1P7-201ENST00000406908 RBM17Q96I25 401 aaKnown RBP21.14■□□□□ 0.97
HMGA1P7-201ENST00000406908 COG6Q9Y2V7 657 aa21.14■□□□□ 0.97
HMGA1P7-201ENST00000406908 LAMB2P55268 1798 aa21.14■□□□□ 0.97
HMGA1P7-201ENST00000406908 UBTFL1P0CB47 393 aaPredicted RBP21.13■□□□□ 0.97
HMGA1P7-201ENST00000406908 DALRD3Q5D0E6 543 aaKnown RBP21.13■□□□□ 0.97
HMGA1P7-201ENST00000406908 CRAMP1Q96RY5 1269 aa21.13■□□□□ 0.97
HMGA1P7-201ENST00000406908 BCS1LQ9Y276 419 aa21.13■□□□□ 0.97
HMGA1P7-201ENST00000406908 SUPT16HQ9Y5B9 1047 aaKnown RBP21.13■□□□□ 0.97
HMGA1P7-201ENST00000406908 ZBTB7BO15156 539 aaPredicted RBP21.12■□□□□ 0.97
HMGA1P7-201ENST00000406908 CCDC152Q4G0S7 254 aa21.12■□□□□ 0.97
HMGA1P7-201ENST00000406908 DDX46Q7L014 1031 aaKnown RBP21.12■□□□□ 0.97
HMGA1P7-201ENST00000406908 SEC31BQ9NQW1 1179 aa21.12■□□□□ 0.97
HMGA1P7-201ENST00000406908 DLEC1Q9Y238 1755 aa21.11■□□□□ 0.97
HMGA1P7-201ENST00000406908 GNAI3P08754 354 aa21.11■□□□□ 0.97
HMGA1P7-201ENST00000406908 ALDH1B1P30837 517 aa21.11■□□□□ 0.97
HMGA1P7-201ENST00000406908 MVPQ14764 893 aaKnown RBP21.11■□□□□ 0.97
HMGA1P7-201ENST00000406908 LMBR1LQ6UX01 489 aa21.11■□□□□ 0.97
HMGA1P7-201ENST00000406908 PELP1Q8IZL8 1130 aaKnown RBP21.11■□□□□ 0.97
HMGA1P7-201ENST00000406908 BICC1Q9H694 974 aaKnown RBP21.11■□□□□ 0.97
HMGA1P7-201ENST00000406908 GREM2Q9H772 168 aa21.11■□□□□ 0.97
HMGA1P7-201ENST00000406908 BRCA1P38398 1863 aaKnown RBP21.11■□□□□ 0.97
HMGA1P7-201ENST00000406908 YBX3P16989 372 aaKnown RBP eCLIP21.1■□□□□ 0.97
HMGA1P7-201ENST00000406908 PRPF40BQ6NWY9 871 aaKnown RBP21.1■□□□□ 0.97
HMGA1P7-201ENST00000406908 ANKRD44Q8N8A2 993 aa21.1■□□□□ 0.97
HMGA1P7-201ENST00000406908 CELF1Q92879 486 aaKnown RBP21.1■□□□□ 0.97
HMGA1P7-201ENST00000406908 GRAPQ13588 217 aa21.09■□□□□ 0.97
HMGA1P7-201ENST00000406908 GPR162Q16538 588 aa21.09■□□□□ 0.97
HMGA1P7-201ENST00000406908 RABL6Q3YEC7 729 aaPredicted RBP21.09■□□□□ 0.97
HMGA1P7-201ENST00000406908 GRAPLQ8TC17 118 aaPredicted RBP21.09■□□□□ 0.97
HMGA1P7-201ENST00000406908 ZNF219Q9P2Y4 722 aaPredicted RBP21.09■□□□□ 0.97
HMGA1P7-201ENST00000406908 LRRFIP2Q9Y608 721 aaKnown RBP21.09■□□□□ 0.97
HMGA1P7-201ENST00000406908 TAF1P21675 1872 aa21.09■□□□□ 0.97
HMGA1P7-201ENST00000406908 SLX4Q8IY92 1834 aa21.08■□□□□ 0.97
HMGA1P7-201ENST00000406908 FAM161AQ3B820 660 aa21.08■□□□□ 0.97
HMGA1P7-201ENST00000406908 C7orf43Q8WVR3 580 aa21.08■□□□□ 0.97
HMGA1P7-201ENST00000406908 RTL9Q8NET4 1388 aa21.08■□□□□ 0.96
HMGA1P7-201ENST00000406908 MYH3P11055 1940 aa21.08■□□□□ 0.96
HMGA1P7-201ENST00000406908 BBOX1O75936 387 aa21.07■□□□□ 0.96
HMGA1P7-201ENST00000406908 ITGA6P23229 1130 aa21.07■□□□□ 0.96
HMGA1P7-201ENST00000406908 RPS8P62241 208 aaKnown RBP21.07■□□□□ 0.96
HMGA1P7-201ENST00000406908 DDX19BQ9UMR2 479 aa21.07■□□□□ 0.96
HMGA1P7-201ENST00000406908 HDAC5Q9UQL6 1122 aa21.07■□□□□ 0.96
HMGA1P7-201ENST00000406908 CHMP3Q9Y3E7 222 aa21.07■□□□□ 0.96
HMGA1P7-201ENST00000406908 COL4A1P02462 1669 aa21.06■□□□□ 0.96
HMGA1P7-201ENST00000406908 C21orf2O43822 256 aa21.06■□□□□ 0.96
HMGA1P7-201ENST00000406908 GNAI2P04899 355 aa21.06■□□□□ 0.96
HMGA1P7-201ENST00000406908 OLFM4Q6UX06 510 aa21.06■□□□□ 0.96
HMGA1P7-201ENST00000406908 SLC51AQ86UW1 340 aa21.06■□□□□ 0.96
HMGA1P7-201ENST00000406908 PPEF1O14829 653 aaPredicted RBP21.05■□□□□ 0.96
HMGA1P7-201ENST00000406908 ANKRD18BA2A2Z9 1011 aa21.04■□□□□ 0.96
HMGA1P7-201ENST00000406908 IFIT5Q13325 482 aaKnown RBP21.04■□□□□ 0.96
HMGA1P7-201ENST00000406908 CDC5LQ99459 802 aaKnown RBP21.04■□□□□ 0.96
HMGA1P7-201ENST00000406908 C1orf115Q9H7X2 142 aa21.04■□□□□ 0.96
HMGA1P7-201ENST00000406908 CACNA1SQ13698 1873 aa21.03■□□□□ 0.96
HMGA1P7-201ENST00000406908 CCDC57Q2TAC2 916 aa21.03■□□□□ 0.96
HMGA1P7-201ENST00000406908 ANKRD18AQ8IVF6 992 aa21.03■□□□□ 0.96
HMGA1P7-201ENST00000406908 ZBTB40Q9NUA8 1239 aa21.03■□□□□ 0.96
HMGA1P7-201ENST00000406908 ATP6V0A2Q9Y487 856 aa21.03■□□□□ 0.96
HMGA1P7-201ENST00000406908 SP8Q8IXZ3 490 aa21.02■□□□□ 0.96
HMGA1P7-201ENST00000406908 ZNF594Q96JF6 807 aaPredicted RBP21.02■□□□□ 0.96
HMGA1P7-201ENST00000406908 CRBNQ96SW2 442 aa21.02■□□□□ 0.96
HMGA1P7-201ENST00000406908 GRIN3BO60391 1043 aa21.01■□□□□ 0.95
HMGA1P7-201ENST00000406908 ARFGEF1Q9Y6D6 1849 aa21.01■□□□□ 0.95
HMGA1P7-201ENST00000406908 IGHMBP2P38935 993 aaKnown RBP21■□□□□ 0.95
HMGA1P7-201ENST00000406908 RFX5P48382 616 aaPredicted RBP21■□□□□ 0.95
HMGA1P7-201ENST00000406908 MTX1Q13505 466 aa21■□□□□ 0.95
HMGA1P7-201ENST00000406908 ARHGAP27Q6ZUM4 889 aa21■□□□□ 0.95
HMGA1P7-201ENST00000406908 TMC4Q7Z404 712 aa21■□□□□ 0.95
HMGA1P7-201ENST00000406908 DCAF8L1A6NGE4 600 aa20.99■□□□□ 0.95
HMGA1P7-201ENST00000406908 ATP8B2P98198 1209 aa20.99■□□□□ 0.95
HMGA1P7-201ENST00000406908 CCDC93Q567U6 631 aa20.99■□□□□ 0.95
HMGA1P7-201ENST00000406908 CC2D2BQ6DHV5 1058 aa20.99■□□□□ 0.95
HMGA1P7-201ENST00000406908 KLHDC4Q8TBB5 520 aa20.99■□□□□ 0.95
HMGA1P7-201ENST00000406908 CHMP4BQ9H444 224 aaKnown RBP20.99■□□□□ 0.95
HMGA1P7-201ENST00000406908 BSDC1Q9NW68 430 aaPredicted RBP20.99■□□□□ 0.95
HMGA1P7-201ENST00000406908 TAF7LQ5H9L4 462 aa20.98■□□□□ 0.95
HMGA1P7-201ENST00000406908 SOGA3Q5TF21 947 aa20.98■□□□□ 0.95
HMGA1P7-201ENST00000406908 MPHOSPH8Q99549 860 aa20.98■□□□□ 0.95
HMGA1P7-201ENST00000406908 SNED1Q8TER0 1413 aa20.97■□□□□ 0.95
HMGA1P7-201ENST00000406908 PNMA6EA0A0J9YXQ4 647 aa20.97■□□□□ 0.95
HMGA1P7-201ENST00000406908 NFKBIEO00221 500 aa20.97■□□□□ 0.95
HMGA1P7-201ENST00000406908 SRGAP3O43295 1099 aa20.97■□□□□ 0.95
HMGA1P7-201ENST00000406908 PTPN12Q05209 780 aaKnown RBP20.97■□□□□ 0.95
HMGA1P7-201ENST00000406908 PUS3Q9BZE2 481 aaKnown RBP20.97■□□□□ 0.95
HMGA1P7-201ENST00000406908 TMX4Q9H1E5 349 aaPredicted RBP20.97■□□□□ 0.95
HMGA1P7-201ENST00000406908 CENPBP07199 599 aaPredicted RBP20.96■□□□□ 0.95
HMGA1P7-201ENST00000406908 CEP85Q6P2H3 762 aa20.96■□□□□ 0.95
HMGA1P7-201ENST00000406908 LDHAL6AQ6ZMR3 332 aa20.96■□□□□ 0.95
HMGA1P7-201ENST00000406908 RTKN2Q8IZC4 609 aa20.96■□□□□ 0.95
HMGA1P7-201ENST00000406908 MINPP1Q9UNW1 487 aa20.96■□□□□ 0.95
HMGA1P7-201ENST00000406908 GPSM2P81274 684 aa20.95■□□□□ 0.94
HMGA1P7-201ENST00000406908 NSFL1CQ9UNZ2 370 aaKnown RBP20.95■□□□□ 0.94
HMGA1P7-201ENST00000406908 IRX6P78412 446 aaPredicted RBP20.94■□□□□ 0.94
HMGA1P7-201ENST00000406908 RASSF7Q02833 373 aa20.94■□□□□ 0.94
HMGA1P7-201ENST00000406908 POLA2Q14181 598 aa20.94■□□□□ 0.94
HMGA1P7-201ENST00000406908 GRIPAP1Q4V328 841 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms