RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 ZNF277Q9NRM2 450 aaPredicted RBP13.23□□□□□ -0.29
FAM49A-202ENST00000406434 CWC25Q9NXE8 425 aaPredicted RBP13.23□□□□□ -0.29
FAM49A-202ENST00000406434 FER1L6Q2WGJ9 1857 aa13.23□□□□□ -0.29
FAM49A-202ENST00000406434 ARFGEF2Q9Y6D5 1785 aa13.23□□□□□ -0.29
FAM49A-202ENST00000406434 RIC1Q4ADV7 1423 aa13.22□□□□□ -0.29
FAM49A-202ENST00000406434 ABCC4O15439 1325 aa13.22□□□□□ -0.29
FAM49A-202ENST00000406434 KDM2BQ8NHM5 1336 aa13.22□□□□□ -0.29
FAM49A-202ENST00000406434 ZNF521Q96K83 1311 aa13.22□□□□□ -0.29
FAM49A-202ENST00000406434 FLIIQ13045 1269 aa13.22□□□□□ -0.29
FAM49A-202ENST00000406434 REM2Q8IYK8 340 aaPredicted RBP13.22□□□□□ -0.29
FAM49A-202ENST00000406434 ZBTB38Q8NAP3 1195 aaPredicted RBP13.22□□□□□ -0.29
FAM49A-202ENST00000406434 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
FAM49A-202ENST00000406434 LTBP3Q9NS15 1303 aa13.21□□□□□ -0.29
FAM49A-202ENST00000406434 KIF3CO14782 793 aa13.21□□□□□ -0.29
FAM49A-202ENST00000406434 BBOX1O75936 387 aa13.21□□□□□ -0.29
FAM49A-202ENST00000406434 CC2D2BQ6DHV5 1058 aa13.21□□□□□ -0.29
FAM49A-202ENST00000406434 DPY19L2Q6NUT2 758 aa13.21□□□□□ -0.29
FAM49A-202ENST00000406434 SLC51AQ86UW1 340 aa13.21□□□□□ -0.29
FAM49A-202ENST00000406434 GLTPD2A6NH11 291 aa13.2□□□□□ -0.3
FAM49A-202ENST00000406434 E9PSI1 815 aa13.2□□□□□ -0.3
FAM49A-202ENST00000406434 IGKV5-2P06315 115 aa13.2□□□□□ -0.3
FAM49A-202ENST00000406434 CWF19L2Q2TBE0 894 aaKnown RBP13.2□□□□□ -0.3
FAM49A-202ENST00000406434 C16orf71Q8IYS4 520 aaPredicted RBP13.2□□□□□ -0.3
FAM49A-202ENST00000406434 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
FAM49A-202ENST00000406434 PCCAP05165 728 aaPredicted RBP13.2□□□□□ -0.3
FAM49A-202ENST00000406434 HSP90B1P14625 803 aaKnown RBP13.2□□□□□ -0.3
FAM49A-202ENST00000406434 SLFN5Q08AF3 891 aa13.2□□□□□ -0.3
FAM49A-202ENST00000406434 GRAPQ13588 217 aa13.2□□□□□ -0.3
FAM49A-202ENST00000406434 SF3B3Q15393 1217 aaKnown RBP13.2□□□□□ -0.3
FAM49A-202ENST00000406434 GRAPLQ8TC17 118 aaPredicted RBP13.2□□□□□ -0.3
FAM49A-202ENST00000406434 DNAAF4Q8WXU2 420 aa13.2□□□□□ -0.3
FAM49A-202ENST00000406434 CCDC85AQ96PX6 553 aaPredicted RBP13.2□□□□□ -0.3
FAM49A-202ENST00000406434 ATP6V0A2Q9Y487 856 aa13.2□□□□□ -0.3
FAM49A-202ENST00000406434 TAF1P21675 1872 aa13.19□□□□□ -0.3
FAM49A-202ENST00000406434 LAMB2P55268 1798 aa13.19□□□□□ -0.3
FAM49A-202ENST00000406434 ZC3H4Q9UPT8 1303 aaKnown RBP13.19□□□□□ -0.3
FAM49A-202ENST00000406434 CACNA1FO60840 1977 aa13.19□□□□□ -0.3
FAM49A-202ENST00000406434 IARSP41252 1262 aaKnown RBP13.19□□□□□ -0.3
FAM49A-202ENST00000406434 SP8Q8IXZ3 490 aa13.19□□□□□ -0.3
FAM49A-202ENST00000406434 DICER1Q9UPY3 1922 aaKnown RBP13.18□□□□□ -0.3
FAM49A-202ENST00000406434 NEURL1BA8MQ27 555 aa13.18□□□□□ -0.3
FAM49A-202ENST00000406434 F6X3S4 739 aa13.18□□□□□ -0.3
FAM49A-202ENST00000406434 PDE8AO60658 829 aa13.18□□□□□ -0.3
FAM49A-202ENST00000406434 DDNO94850 711 aaPredicted RBP13.18□□□□□ -0.3
FAM49A-202ENST00000406434 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
FAM49A-202ENST00000406434 JDP2Q8WYK2 163 aa13.18□□□□□ -0.3
FAM49A-202ENST00000406434 CELF1Q92879 486 aaKnown RBP13.18□□□□□ -0.3
FAM49A-202ENST00000406434 PSMD1Q99460 953 aa13.18□□□□□ -0.3
FAM49A-202ENST00000406434 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
FAM49A-202ENST00000406434 RPS8P62241 208 aaKnown RBP13.17□□□□□ -0.3
FAM49A-202ENST00000406434 CCDC152Q4G0S7 254 aa13.17□□□□□ -0.3
FAM49A-202ENST00000406434 DPP8Q6V1X1 898 aaPredicted RBP13.17□□□□□ -0.3
FAM49A-202ENST00000406434 LARGE2Q8N3Y3 721 aa13.17□□□□□ -0.3
FAM49A-202ENST00000406434 MPNDQ8N594 471 aa13.17□□□□□ -0.3
FAM49A-202ENST00000406434 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
FAM49A-202ENST00000406434 DDX60Q8IY21 1712 aaKnown RBP13.17□□□□□ -0.3
FAM49A-202ENST00000406434 TOMM70O94826 608 aa13.16□□□□□ -0.3
FAM49A-202ENST00000406434 GCKRQ14397 625 aa13.16□□□□□ -0.3
FAM49A-202ENST00000406434 SLC4A10Q6U841 1118 aa13.16□□□□□ -0.3
FAM49A-202ENST00000406434 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
FAM49A-202ENST00000406434 LINS1Q8NG48 757 aa13.16□□□□□ -0.3
FAM49A-202ENST00000406434 TIAM2Q8IVF5 1701 aa13.15□□□□□ -0.3
FAM49A-202ENST00000406434 H7C1W4 665 aa13.15□□□□□ -0.3
FAM49A-202ENST00000406434 PPIP5K2O43314 1243 aa13.15□□□□□ -0.3
FAM49A-202ENST00000406434 TMC4Q7Z404 712 aa13.15□□□□□ -0.3
FAM49A-202ENST00000406434 SUPT20HQ8NEM7 779 aa13.15□□□□□ -0.3
FAM49A-202ENST00000406434 NSFL1CQ9UNZ2 370 aaKnown RBP13.15□□□□□ -0.3
FAM49A-202ENST00000406434 CDHR2Q9BYE9 1310 aa13.14□□□□□ -0.31
FAM49A-202ENST00000406434 EIF6P56537 245 aaKnown RBP13.14□□□□□ -0.31
FAM49A-202ENST00000406434 AOC3Q16853 763 aa13.14□□□□□ -0.31
FAM49A-202ENST00000406434 MRPL50Q8N5N7 158 aaKnown RBP13.14□□□□□ -0.31
FAM49A-202ENST00000406434 BCL2L13Q9BXK5 485 aa13.14□□□□□ -0.31
FAM49A-202ENST00000406434 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
FAM49A-202ENST00000406434 ZNF541Q9H0D2 1346 aa13.13□□□□□ -0.31
FAM49A-202ENST00000406434 POTECB2RU33 542 aa13.13□□□□□ -0.31
FAM49A-202ENST00000406434 C6orf229H3BNL8 230 aa13.13□□□□□ -0.31
FAM49A-202ENST00000406434 CTSWP56202 376 aa13.13□□□□□ -0.31
FAM49A-202ENST00000406434 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
FAM49A-202ENST00000406434 NIM1KQ8IY84 436 aa13.13□□□□□ -0.31
FAM49A-202ENST00000406434 TTLL11Q8NHH1 800 aa13.13□□□□□ -0.31
FAM49A-202ENST00000406434 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
FAM49A-202ENST00000406434 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
FAM49A-202ENST00000406434 FZD9O00144 591 aa13.12□□□□□ -0.31
FAM49A-202ENST00000406434 GPSM2P81274 684 aa13.12□□□□□ -0.31
FAM49A-202ENST00000406434 HNRNPUQ00839 825 aaKnown RBP eCLIP13.12□□□□□ -0.31
FAM49A-202ENST00000406434 ANKRD18AQ8IVF6 992 aa13.12□□□□□ -0.31
FAM49A-202ENST00000406434 TRMT2AQ8IZ69 625 aaKnown RBP13.12□□□□□ -0.31
FAM49A-202ENST00000406434 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
FAM49A-202ENST00000406434 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
FAM49A-202ENST00000406434 SNED1Q8TER0 1413 aa13.12□□□□□ -0.31
FAM49A-202ENST00000406434 RIMBP2O15034 1052 aa13.11□□□□□ -0.31
FAM49A-202ENST00000406434 RTFDC1Q9BY42 306 aaPredicted RBP13.11□□□□□ -0.31
FAM49A-202ENST00000406434 SRCIN1Q9C0H9 1055 aa13.11□□□□□ -0.31
FAM49A-202ENST00000406434 GREM2Q9H772 168 aa13.11□□□□□ -0.31
FAM49A-202ENST00000406434 C9orf78Q9NZ63 289 aaPredicted RBP13.11□□□□□ -0.31
FAM49A-202ENST00000406434 ANKIB1Q9P2G1 1089 aa13.11□□□□□ -0.31
FAM49A-202ENST00000406434 WASHC4Q2M389 1173 aa13.1□□□□□ -0.31
FAM49A-202ENST00000406434 CDC5LQ99459 802 aaKnown RBP13.1□□□□□ -0.31
FAM49A-202ENST00000406434 VPS33BQ9H267 617 aa13.1□□□□□ -0.31
FAM49A-202ENST00000406434 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms