RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 SH2B1Q9NRF2 756 aaPredicted RBP11.8□□□□□ -0.52
MSH2-202ENST00000406134 RFX7Q2KHR2 1363 aa11.8□□□□□ -0.52
MSH2-202ENST00000406134 FOXO4P98177 505 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 TNNI3KQ59H18 835 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 LARP1Q6PKG0 1096 aaKnown RBP11.79□□□□□ -0.52
MSH2-202ENST00000406134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.526e-7■■■□□ 17.1
MSH2-202ENST00000406134 FPGT-TNNI3KV9GXZ4 949 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 MYH3P11055 1940 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 NBPF26B4DH59 902 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 FIBPO43427 364 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 HCLS1P14317 486 aaPredicted RBP11.79□□□□□ -0.52
MSH2-202ENST00000406134 TFCP2Q12800 502 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 SLFNL1Q499Z3 407 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 NBPF14Q5TI25 921 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 NBPF10Q6P3W6 841 aaKnown RBP11.79□□□□□ -0.52
MSH2-202ENST00000406134 NBPF15Q8N660 670 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 SEC62Q99442 399 aaKnown RBP11.79□□□□□ -0.52
MSH2-202ENST00000406134 ATP5JP18859 108 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 FAM173BQ6P4H8 233 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 TNS2Q63HR2 1409 aa11.79□□□□□ -0.52
MSH2-202ENST00000406134 A0A0G2JLW4 131 aa11.78□□□□□ -0.52
MSH2-202ENST00000406134 STOX1Q6ZVD7 989 aa11.78□□□□□ -0.52
MSH2-202ENST00000406134 RIC3Q7Z5B4 369 aa11.78□□□□□ -0.52
MSH2-202ENST00000406134 CABLES1Q8TDN4 633 aa11.78□□□□□ -0.52
MSH2-202ENST00000406134 CPDO75976 1380 aa11.78□□□□□ -0.52
MSH2-202ENST00000406134 CCDC129Q6ZRS4 1044 aa11.78□□□□□ -0.52
MSH2-202ENST00000406134 ATG9AQ7Z3C6 839 aa11.78□□□□□ -0.52
MSH2-202ENST00000406134 ZSCAN31Q96LW9 406 aaPredicted RBP11.78□□□□□ -0.52
MSH2-202ENST00000406134 DDX58O95786 925 aaKnown RBP11.78□□□□□ -0.52
MSH2-202ENST00000406134 G3BP1Q13283 466 aaKnown RBP eCLIP11.78□□□□□ -0.523e-6■■■□□ 17.2
MSH2-202ENST00000406134 LMOD2Q6P5Q4 547 aa11.78□□□□□ -0.52
MSH2-202ENST00000406134 GIMAP6Q6P9H5 292 aa11.78□□□□□ -0.52
MSH2-202ENST00000406134 GPATCH3Q96I76 525 aa11.78□□□□□ -0.52
MSH2-202ENST00000406134 MCM5P33992 734 aa11.77□□□□□ -0.52
MSH2-202ENST00000406134 TERF1P54274 439 aa11.77□□□□□ -0.52
MSH2-202ENST00000406134 ANKRD13DQ6ZTN6 518 aa11.77□□□□□ -0.52
MSH2-202ENST00000406134 C19orf44Q9H6X5 657 aa11.77□□□□□ -0.52
MSH2-202ENST00000406134 USP25Q9UHP3 1055 aa11.77□□□□□ -0.52
MSH2-202ENST00000406134 PALLDQ8WX93 1383 aa11.77□□□□□ -0.53
MSH2-202ENST00000406134 MSNP26038 577 aaKnown RBP11.77□□□□□ -0.53
MSH2-202ENST00000406134 DBNDD2Q9BQY9 259 aa11.77□□□□□ -0.53
MSH2-202ENST00000406134 CCDC39Q9UFE4 941 aa11.77□□□□□ -0.53
MSH2-202ENST00000406134 TPM2P07951 284 aa11.77□□□□□ -0.53
MSH2-202ENST00000406134 LIG1P18858 919 aa11.77□□□□□ -0.53
MSH2-202ENST00000406134 UVSSAQ2YD98 709 aa11.77□□□□□ -0.53
MSH2-202ENST00000406134 ELP1O95163 1332 aa11.76□□□□□ -0.53
MSH2-202ENST00000406134 ARAP2Q8WZ64 1704 aa11.76□□□□□ -0.53
MSH2-202ENST00000406134 ANP32BQ92688 251 aaKnown RBP11.76□□□□□ -0.53
MSH2-202ENST00000406134 SYAP1Q96A49 352 aaPredicted RBP11.76□□□□□ -0.53
MSH2-202ENST00000406134 HAUS7Q99871 368 aa11.76□□□□□ -0.53
MSH2-202ENST00000406134 FSD1Q9BTV5 496 aa11.76□□□□□ -0.53
MSH2-202ENST00000406134 KCNF1Q9H3M0 494 aa11.76□□□□□ -0.53
MSH2-202ENST00000406134 STRCQ7RTU9 1775 aa11.76□□□□□ -0.53
MSH2-202ENST00000406134 CASZ1Q86V15 1759 aa11.76□□□□□ -0.53
MSH2-202ENST00000406134 HIP1O00291 1037 aa11.76□□□□□ -0.53
MSH2-202ENST00000406134 CYP21A2P08686 494 aa11.76□□□□□ -0.53
MSH2-202ENST00000406134 UBE3BQ7Z3V4 1068 aa11.76□□□□□ -0.53
MSH2-202ENST00000406134 ATP5J2-PTCD1G3V325 749 aa11.75□□□□□ -0.53
MSH2-202ENST00000406134 FOXP2O15409 715 aa11.75□□□□□ -0.53
MSH2-202ENST00000406134 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
MSH2-202ENST00000406134 SNRPA1P09661 255 aaKnown RBP11.75□□□□□ -0.53
MSH2-202ENST00000406134 CHRNA2Q15822 529 aa11.75□□□□□ -0.53
MSH2-202ENST00000406134 RBM43Q6ZSC3 357 aaKnown RBP11.75□□□□□ -0.53
MSH2-202ENST00000406134 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
MSH2-202ENST00000406134 DCAF5Q96JK2 942 aa11.75□□□□□ -0.53
MSH2-202ENST00000406134 WNK3Q9BYP7 1800 aa11.75□□□□□ -0.53
MSH2-202ENST00000406134 JAK2O60674 1132 aa11.75□□□□□ -0.53
MSH2-202ENST00000406134 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.75□□□□□ -0.53
MSH2-202ENST00000406134 PROSER2Q86WR7 435 aaPredicted RBP11.75□□□□□ -0.53
MSH2-202ENST00000406134 ZNF830Q96NB3 372 aaPredicted RBP11.75□□□□□ -0.53
MSH2-202ENST00000406134 NLRP2Q9NX02 1062 aa11.75□□□□□ -0.53
MSH2-202ENST00000406134 COL5A2P05997 1499 aaPredicted RBP11.75□□□□□ -0.53
MSH2-202ENST00000406134 CHD4Q14839 1912 aa11.75□□□□□ -0.53
MSH2-202ENST00000406134 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 H7C1W4 665 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 PHF14O94880 888 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 CTDNEP1O95476 244 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 ADCY5O95622 1261 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 ADD1P35611 737 aaKnown RBP11.74□□□□□ -0.53
MSH2-202ENST00000406134 FAM184AQ8NB25 1140 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 RAPGEF4Q8WZA2 1011 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 GTF3C6Q969F1 213 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 PGBD1Q96JS3 809 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 DOCK2Q92608 1830 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 KDM4AO75164 1064 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 TATP17735 454 aaPredicted RBP11.74□□□□□ -0.53
MSH2-202ENST00000406134 KLHL34Q8N239 644 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 MPNDQ8N594 471 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 NUP98P52948 1817 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 SALL1Q9NSC2 1324 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 RESTQ13127 1097 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 FERMT3Q86UX7 667 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 MRVI1Q9Y6F6 885 aa11.74□□□□□ -0.53
MSH2-202ENST00000406134 SPATA31A3Q5VYP0 1347 aa11.73□□□□□ -0.53
MSH2-202ENST00000406134 VPS37CA5D8V6 355 aaPredicted RBP11.73□□□□□ -0.53
MSH2-202ENST00000406134 ZKSCAN1P17029 563 aaPredicted RBP11.73□□□□□ -0.53
MSH2-202ENST00000406134 BLOC1S2Q6QNY1 142 aa11.73□□□□□ -0.53
MSH2-202ENST00000406134 TTLL7Q6ZT98 887 aa11.73□□□□□ -0.53
MSH2-202ENST00000406134 C17orf53Q8N3J3 647 aaPredicted RBP11.73□□□□□ -0.53
MSH2-202ENST00000406134 HDAC5Q9UQL6 1122 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms