RNA–Protein interactions for RNA: ENST00000405141.5

NCOA1-204, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA1, Length 7,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-204ENST00000405141 STARD3NLO95772 234 aa10.94□□□□□ -0.66
NCOA1-204ENST00000405141 CTCFLQ8NI51 663 aaPredicted RBP10.94□□□□□ -0.66
NCOA1-204ENST00000405141 CCDC196A0A1B0GTZ2 297 aa10.94□□□□□ -0.66
NCOA1-204ENST00000405141 SYT10Q6XYQ8 523 aa10.94□□□□□ -0.66
NCOA1-204ENST00000405141 MAATS1Q7Z4T9 603 aa10.94□□□□□ -0.66
NCOA1-204ENST00000405141 MRPS27Q92552 414 aaKnown RBP10.94□□□□□ -0.66
NCOA1-204ENST00000405141 PBRM1Q86U86 1689 aa10.94□□□□□ -0.66
NCOA1-204ENST00000405141 USO1O60763 962 aaKnown RBP10.94□□□□□ -0.66
NCOA1-204ENST00000405141 SLC5A1P13866 664 aa10.94□□□□□ -0.66
NCOA1-204ENST00000405141 APOBRQ0VD83 1088 aa10.94□□□□□ -0.66
NCOA1-204ENST00000405141 RRAGBQ5VZM2 374 aa10.94□□□□□ -0.66
NCOA1-204ENST00000405141 SYCP2Q9BX26 1530 aa10.94□□□□□ -0.66
NCOA1-204ENST00000405141 IPO4Q8TEX9 1081 aaKnown RBP10.93□□□□□ -0.66
NCOA1-204ENST00000405141 DRC1Q96MC2 740 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 RSPH14Q9UHP6 348 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 AMOTL2Q9Y2J4 779 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 CHMLP26374 656 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 GBP2P32456 591 aaPredicted RBP10.93□□□□□ -0.66
NCOA1-204ENST00000405141 MCM6Q14566 821 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 KARSQ15046 597 aaKnown RBP10.93□□□□□ -0.66
NCOA1-204ENST00000405141 PPIP5K1Q6PFW1 1433 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 ANKRD18BA2A2Z9 1011 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 ATP2C2O75185 946 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 CD109Q6YHK3 1445 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 GADD45BO75293 160 aaPredicted RBP10.93□□□□□ -0.66
NCOA1-204ENST00000405141 CATIPQ7Z7H3 387 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 ALG1Q9BT22 464 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 EIF2AK4Q9P2K8 1649 aaKnown RBP10.93□□□□□ -0.66
NCOA1-204ENST00000405141 LMOD1P29536 600 aaPredicted RBP10.93□□□□□ -0.66
NCOA1-204ENST00000405141 HLTFQ14527 1009 aaKnown RBP eCLIP10.93□□□□□ -0.66
NCOA1-204ENST00000405141 CREB3L3Q68CJ9 461 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 ITSN2Q9NZM3 1697 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 PIK3C2GO75747 1445 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 CCDC194A0A1B0GVG4 234 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 ZBTB7BO15156 539 aaPredicted RBP10.93□□□□□ -0.66
NCOA1-204ENST00000405141 EIF4A2Q14240 407 aaKnown RBP10.93□□□□□ -0.66
NCOA1-204ENST00000405141 MTHFSDQ2M296 383 aaKnown RBP10.93□□□□□ -0.66
NCOA1-204ENST00000405141 CAVIN4Q5BKX8 364 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 RUFY3Q7L099 469 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
NCOA1-204ENST00000405141 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
NCOA1-204ENST00000405141 PER1O15534 1290 aaPredicted RBP10.92□□□□□ -0.66
NCOA1-204ENST00000405141 SLU7O95391 586 aaKnown RBP10.92□□□□□ -0.66
NCOA1-204ENST00000405141 ALS2CR12Q96Q35 445 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 PAFAH1B1P43034 410 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 ZRSR2Q15696 482 aaKnown RBP10.92□□□□□ -0.66
NCOA1-204ENST00000405141 PUF60Q9UHX1 559 aaKnown RBP10.92□□□□□ -0.66
NCOA1-204ENST00000405141 GOLGA6L9A6NEM1 432 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 ANKLE2Q86XL3 938 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 GTF3C6Q969F1 213 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 N4BP3O15049 544 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 HS1BP3Q53T59 392 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 MFSD6Q6ZSS7 791 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 VAT1LQ9HCJ6 419 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 IFNKQ9P0W0 207 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 POLKQ9UBT6 870 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 TMCO5BA8MYB1 307 aa10.92□□□□□ -0.66
NCOA1-204ENST00000405141 CWC25Q9NXE8 425 aaPredicted RBP10.92□□□□□ -0.66
NCOA1-204ENST00000405141 RBM25P49756 843 aaKnown RBP10.91□□□□□ -0.66
NCOA1-204ENST00000405141 MCMDC2Q4G0Z9 681 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 CAPZA3Q96KX2 299 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 MYO1BO43795 1136 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 SPTY2D1Q68D10 685 aaPredicted RBP10.91□□□□□ -0.66
NCOA1-204ENST00000405141 IQCA1Q86XH1 822 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 NUP160Q12769 1436 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 KDM5BQ9UGL1 1544 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 SLC39A6Q13433 755 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 DZIP1Q86YF9 867 aaKnown RBP10.91□□□□□ -0.66
NCOA1-204ENST00000405141 LZTFL1Q9NQ48 299 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 VPS18Q9P253 973 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 PHF8Q9UPP1 1060 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 FANCAO15360 1455 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 RXRAP19793 462 aa10.91□□□□□ -0.66
NCOA1-204ENST00000405141 CTNNBL1Q8WYA6 563 aaPredicted RBP10.91□□□□□ -0.66
NCOA1-204ENST00000405141 U2AF2P26368 475 aaKnown RBP eCLIP10.9□□□□□ -0.664e-6■■□□□ 13.2
NCOA1-204ENST00000405141 PRPF4BQ13523 1007 aaKnown RBP10.9□□□□□ -0.66
NCOA1-204ENST00000405141 CWF19L2Q2TBE0 894 aaKnown RBP10.9□□□□□ -0.66
NCOA1-204ENST00000405141 COL17A1Q9UMD9 1497 aaPredicted RBP10.9□□□□□ -0.66
NCOA1-204ENST00000405141 CAVIN2O95810 425 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 TRIM47Q96LD4 638 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 GTPBP4Q9BZE4 634 aaKnown RBP10.9□□□□□ -0.66
NCOA1-204ENST00000405141 CTAGE15A4D2H0 777 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 RIOK3O14730 519 aaKnown RBP10.9□□□□□ -0.66
NCOA1-204ENST00000405141 CTAGE8P0CG41 777 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 CCDC40Q4G0X9 1142 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 CTAGE6Q86UF2 777 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 CTAGE4Q8IX94 777 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 KCNG4Q8TDN1 519 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 GOLGA6L10A0A0M3HER8 536 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 CCDC96Q2M329 555 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 MICALCLQ6ZW33 695 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 ANKIB1Q9P2G1 1089 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 G2E3Q7L622 706 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 XAGE3Q8WTP9 111 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 DHX58Q96C10 678 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 MMRN2Q9H8L6 949 aa10.9□□□□□ -0.66
NCOA1-204ENST00000405141 SBNO2Q9Y2G9 1366 aa10.9□□□□□ -0.67
NCOA1-204ENST00000405141 HSF2BPO75031 334 aa10.9□□□□□ -0.67
NCOA1-204ENST00000405141 RHOXF2BP0C7M4 288 aa10.9□□□□□ -0.67
NCOA1-204ENST00000405141 RHOXF2Q9BQY4 288 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms