RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 NBPF15Q8N660 670 aa12.56□□□□□ -0.4
NUP43-204ENST00000403890 IL17REQ8NFR9 667 aa12.56□□□□□ -0.4
NUP43-204ENST00000403890 ZC3H15Q8WU90 426 aaKnown RBP12.56□□□□□ -0.4
NUP43-204ENST00000403890 COL4A5P29400 1685 aa12.56□□□□□ -0.4
NUP43-204ENST00000403890 RGL2O15211 777 aa12.55□□□□□ -0.4
NUP43-204ENST00000403890 PIP4K2AP48426 406 aaPredicted RBP12.55□□□□□ -0.4
NUP43-204ENST00000403890 HUNKP57058 714 aa12.55□□□□□ -0.4
NUP43-204ENST00000403890 SLAIN1Q8ND83 568 aa12.55□□□□□ -0.4
NUP43-204ENST00000403890 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
NUP43-204ENST00000403890 TRPA1O75762 1119 aa12.54□□□□□ -0.4
NUP43-204ENST00000403890 CTU1Q7Z7A3 348 aaKnown RBP12.54□□□□□ -0.4
NUP43-204ENST00000403890 GNAT3A8MTJ3 354 aa12.53□□□□□ -0.4
NUP43-204ENST00000403890 PPIP5K2O43314 1243 aa12.53□□□□□ -0.4
NUP43-204ENST00000403890 HOXA10P31260 410 aaPredicted RBP12.53□□□□□ -0.4
NUP43-204ENST00000403890 GMPSP49915 693 aaPredicted RBP12.53□□□□□ -0.4
NUP43-204ENST00000403890 CXCL9Q07325 125 aa12.53□□□□□ -0.4
NUP43-204ENST00000403890 RGMBQ6NW40 437 aa12.53□□□□□ -0.4
NUP43-204ENST00000403890 RPGRQ92834 1020 aaKnown RBP12.53□□□□□ -0.4
NUP43-204ENST00000403890 CCDC102AQ96A19 550 aa12.53□□□□□ -0.4
NUP43-204ENST00000403890 VPS33BQ9H267 617 aa12.53□□□□□ -0.4
NUP43-204ENST00000403890 OCEL1Q9H607 264 aa12.53□□□□□ -0.4
NUP43-204ENST00000403890 RNF186Q9NXI6 227 aa12.53□□□□□ -0.4
NUP43-204ENST00000403890 NPC1L1Q9UHC9 1359 aa12.53□□□□□ -0.4
NUP43-204ENST00000403890 BCORQ6W2J9 1755 aa12.52□□□□□ -0.41
NUP43-204ENST00000403890 FAM155AB1AL88 458 aaPredicted RBP12.52□□□□□ -0.41
NUP43-204ENST00000403890 PYGBP11216 843 aa12.52□□□□□ -0.41
NUP43-204ENST00000403890 HIRAP54198 1017 aaPredicted RBP12.52□□□□□ -0.41
NUP43-204ENST00000403890 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
NUP43-204ENST00000403890 KIF23Q02241 960 aaPredicted RBP12.52□□□□□ -0.41
NUP43-204ENST00000403890 GSE1Q14687 1217 aa12.52□□□□□ -0.41
NUP43-204ENST00000403890 NYXQ9GZU5 481 aa12.52□□□□□ -0.41
NUP43-204ENST00000403890 ZNRF3Q9ULT6 936 aa12.52□□□□□ -0.41
NUP43-204ENST00000403890 BTBD11A6QL63 1104 aa12.51□□□□□ -0.41
NUP43-204ENST00000403890 KCNQ3O43525 872 aa12.51□□□□□ -0.41
NUP43-204ENST00000403890 AOC3Q16853 763 aa12.51□□□□□ -0.41
NUP43-204ENST00000403890 HABP4Q5JVS0 413 aaKnown RBP12.51□□□□□ -0.41
NUP43-204ENST00000403890 USP48Q86UV5 1035 aa12.51□□□□□ -0.41
NUP43-204ENST00000403890 CRAMP1Q96RY5 1269 aa12.51□□□□□ -0.41
NUP43-204ENST00000403890 BCL2L13Q9BXK5 485 aa12.51□□□□□ -0.41
NUP43-204ENST00000403890 TMX4Q9H1E5 349 aaPredicted RBP12.51□□□□□ -0.41
NUP43-204ENST00000403890 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
NUP43-204ENST00000403890 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
NUP43-204ENST00000403890 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
NUP43-204ENST00000403890 ZNF157P51786 506 aaPredicted RBP12.5□□□□□ -0.41
NUP43-204ENST00000403890 PKN2Q16513 984 aaKnown RBP12.5□□□□□ -0.41
NUP43-204ENST00000403890 HLFQ16534 295 aa12.5□□□□□ -0.41
NUP43-204ENST00000403890 NUTM1Q86Y26 1132 aa12.5□□□□□ -0.41
NUP43-204ENST00000403890 GAS2L2Q8NHY3 880 aa12.5□□□□□ -0.41
NUP43-204ENST00000403890 RBM17Q96I25 401 aaKnown RBP12.5□□□□□ -0.41
NUP43-204ENST00000403890 KNSTRNQ9Y448 316 aa12.5□□□□□ -0.41
NUP43-204ENST00000403890 KIF7Q2M1P5 1343 aa12.5□□□□□ -0.41
NUP43-204ENST00000403890 CDHR2Q9BYE9 1310 aa12.5□□□□□ -0.41
NUP43-204ENST00000403890 PRAMEF22A3QJZ6 481 aa12.49□□□□□ -0.41
NUP43-204ENST00000403890 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
NUP43-204ENST00000403890 H7C1D1 291 aa12.49□□□□□ -0.41
NUP43-204ENST00000403890 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
NUP43-204ENST00000403890 DIAPH1O60610 1272 aaKnown RBP12.49□□□□□ -0.41
NUP43-204ENST00000403890 TNIP1Q15025 636 aa12.49□□□□□ -0.41
NUP43-204ENST00000403890 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
NUP43-204ENST00000403890 C2orf69Q8N8R5 385 aa12.49□□□□□ -0.41
NUP43-204ENST00000403890 TRPM4Q8TD43 1214 aa12.49□□□□□ -0.41
NUP43-204ENST00000403890 GBA2Q9HCG7 927 aaPredicted RBP12.49□□□□□ -0.41
NUP43-204ENST00000403890 CNOT7Q9UIV1 285 aaKnown RBP12.49□□□□□ -0.41
NUP43-204ENST00000403890 ABCC12Q96J65 1359 aa12.48□□□□□ -0.41
NUP43-204ENST00000403890 SUPT20HQ8NEM7 779 aa12.48□□□□□ -0.41
NUP43-204ENST00000403890 CSRNP1Q96S65 589 aa12.48□□□□□ -0.41
NUP43-204ENST00000403890 SNPHO15079 494 aa12.47□□□□□ -0.41
NUP43-204ENST00000403890 DLK2Q6UY11 383 aa12.47□□□□□ -0.41
NUP43-204ENST00000403890 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
NUP43-204ENST00000403890 SLC51AQ86UW1 340 aa12.47□□□□□ -0.41
NUP43-204ENST00000403890 ATP6V0A2Q9Y487 856 aa12.47□□□□□ -0.41
NUP43-204ENST00000403890 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.41
NUP43-204ENST00000403890 RAD17O75943 681 aa12.46□□□□□ -0.41
NUP43-204ENST00000403890 KRT26Q7Z3Y9 468 aa12.46□□□□□ -0.41
NUP43-204ENST00000403890 RTFDC1Q9BY42 306 aaPredicted RBP12.46□□□□□ -0.41
NUP43-204ENST00000403890 HDAC9Q9UKV0 1011 aa12.46□□□□□ -0.41
NUP43-204ENST00000403890 ERVV-1B6SEH8 477 aa12.45□□□□□ -0.42
NUP43-204ENST00000403890 SLC10A3P09131 477 aa12.45□□□□□ -0.42
NUP43-204ENST00000403890 MICALL2Q8IY33 904 aa12.45□□□□□ -0.42
NUP43-204ENST00000403890 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
NUP43-204ENST00000403890 SHTN1A0MZ66 631 aa12.44□□□□□ -0.42
NUP43-204ENST00000403890 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
NUP43-204ENST00000403890 KIAA2012Q0VF49 1180 aa12.44□□□□□ -0.42
NUP43-204ENST00000403890 DPP8Q6V1X1 898 aaPredicted RBP12.44□□□□□ -0.42
NUP43-204ENST00000403890 DCPSQ96C86 337 aaKnown RBP12.44□□□□□ -0.42
NUP43-204ENST00000403890 AKAP11Q9UKA4 1901 aa12.44□□□□□ -0.42
NUP43-204ENST00000403890 SIPA1L3O60292 1781 aaPredicted RBP12.43□□□□□ -0.42
NUP43-204ENST00000403890 U2SURPO15042 1029 aaKnown RBP12.43□□□□□ -0.42
NUP43-204ENST00000403890 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
NUP43-204ENST00000403890 SUSD4Q5VX71 490 aa12.43□□□□□ -0.42
NUP43-204ENST00000403890 SAMD7Q7Z3H4 446 aa12.43□□□□□ -0.42
NUP43-204ENST00000403890 CDAN1Q8IWY9 1227 aa12.43□□□□□ -0.42
NUP43-204ENST00000403890 MPNDQ8N594 471 aa12.43□□□□□ -0.42
NUP43-204ENST00000403890 DPF2Q92785 391 aa12.43□□□□□ -0.42
NUP43-204ENST00000403890 NLRP3Q96P20 1036 aa12.43□□□□□ -0.42
NUP43-204ENST00000403890 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.43□□□□□ -0.42
NUP43-204ENST00000403890 ADM5C9JUS6 153 aa12.42□□□□□ -0.42
NUP43-204ENST00000403890 BBOX1O75936 387 aa12.42□□□□□ -0.42
NUP43-204ENST00000403890 GPTP24298 496 aa12.42□□□□□ -0.42
NUP43-204ENST00000403890 VASPP50552 380 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms