RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 NLGN2Q8NFZ4 835 aa17.08■□□□□ 0.32
SNU13-204ENST00000402458 CNKSR1Q969H4 720 aa17.08■□□□□ 0.32
SNU13-204ENST00000402458 SUCLG2Q96I99 432 aa17.08■□□□□ 0.32
SNU13-204ENST00000402458 SRCAPQ6ZRS2 3230 aa17.08■□□□□ 0.32
SNU13-204ENST00000402458 DLEC1Q9Y238 1755 aa17.07■□□□□ 0.32
SNU13-204ENST00000402458 ZBTB7BO15156 539 aaPredicted RBP17.07■□□□□ 0.32
SNU13-204ENST00000402458 GNAI2P04899 355 aa17.07■□□□□ 0.32
SNU13-204ENST00000402458 ALDH1B1P30837 517 aa17.07■□□□□ 0.32
SNU13-204ENST00000402458 C3orf67Q6ZVT6 689 aa17.07■□□□□ 0.32
SNU13-204ENST00000402458 PIM2Q9P1W9 311 aa17.07■□□□□ 0.32
SNU13-204ENST00000402458 CHMP3Q9Y3E7 222 aa17.07■□□□□ 0.32
SNU13-204ENST00000402458 COL11A2P13942 1736 aaPredicted RBP17.07■□□□□ 0.32
SNU13-204ENST00000402458 HOXA10P31260 410 aaPredicted RBP17.06■□□□□ 0.32
SNU13-204ENST00000402458 TTLL11Q8NHH1 800 aa17.06■□□□□ 0.32
SNU13-204ENST00000402458 BICC1Q9H694 974 aaKnown RBP17.06■□□□□ 0.32
SNU13-204ENST00000402458 KIAA1551Q9HCM1 1747 aa17.06■□□□□ 0.32
SNU13-204ENST00000402458 CSF1RP07333 972 aa17.05■□□□□ 0.32
SNU13-204ENST00000402458 FOXO4P98177 505 aa17.05■□□□□ 0.32
SNU13-204ENST00000402458 LMBR1LQ6UX01 489 aa17.05■□□□□ 0.32
SNU13-204ENST00000402458 TTLL6Q8N841 843 aa17.05■□□□□ 0.32
SNU13-204ENST00000402458 CCDC85AQ96PX6 553 aaPredicted RBP17.05■□□□□ 0.32
SNU13-204ENST00000402458 CRAMP1Q96RY5 1269 aa17.05■□□□□ 0.32
SNU13-204ENST00000402458 LRRFIP2Q9Y608 721 aaKnown RBP17.05■□□□□ 0.32
SNU13-204ENST00000402458 KCNA3P22001 575 aa17.04■□□□□ 0.32
SNU13-204ENST00000402458 IFIT5Q13325 482 aaKnown RBP17.04■□□□□ 0.32
SNU13-204ENST00000402458 CCDC57Q2TAC2 916 aa17.04■□□□□ 0.32
SNU13-204ENST00000402458 DALRD3Q5D0E6 543 aaKnown RBP17.04■□□□□ 0.32
SNU13-204ENST00000402458 CDC5LQ99459 802 aaKnown RBP17.04■□□□□ 0.32
SNU13-204ENST00000402458 TMX4Q9H1E5 349 aaPredicted RBP17.04■□□□□ 0.32
SNU13-204ENST00000402458 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
SNU13-204ENST00000402458 RTL9Q8NET4 1388 aa17.03■□□□□ 0.32
SNU13-204ENST00000402458 ANKRD18BA2A2Z9 1011 aa17.03■□□□□ 0.32
SNU13-204ENST00000402458 GRAPQ13588 217 aa17.03■□□□□ 0.32
SNU13-204ENST00000402458 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
SNU13-204ENST00000402458 EPHA10Q5JZY3 1008 aa17.03■□□□□ 0.32
SNU13-204ENST00000402458 GRAPLQ8TC17 118 aaPredicted RBP17.03■□□□□ 0.32
SNU13-204ENST00000402458 KAZALD1Q96I82 304 aa17.03■□□□□ 0.32
SNU13-204ENST00000402458 GREM2Q9H772 168 aa17.03■□□□□ 0.32
SNU13-204ENST00000402458 BRCA1P38398 1863 aaKnown RBP17.02■□□□□ 0.32
SNU13-204ENST00000402458 BBOX1O75936 387 aa17.02■□□□□ 0.32
SNU13-204ENST00000402458 ITGA6P23229 1130 aa17.02■□□□□ 0.32
SNU13-204ENST00000402458 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
SNU13-204ENST00000402458 RABL6Q3YEC7 729 aaPredicted RBP17.02■□□□□ 0.32
SNU13-204ENST00000402458 ANKRD18AQ8IVF6 992 aa17.02■□□□□ 0.32
SNU13-204ENST00000402458 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
SNU13-204ENST00000402458 CRBNQ96SW2 442 aa17.02■□□□□ 0.32
SNU13-204ENST00000402458 BCS1LQ9Y276 419 aa17.02■□□□□ 0.32
SNU13-204ENST00000402458 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
SNU13-204ENST00000402458 IGHMBP2P38935 993 aaKnown RBP17.01■□□□□ 0.31
SNU13-204ENST00000402458 PRPF40BQ6NWY9 871 aaKnown RBP17.01■□□□□ 0.31
SNU13-204ENST00000402458 TMC4Q7Z404 712 aa17.01■□□□□ 0.31
SNU13-204ENST00000402458 ANKRD44Q8N8A2 993 aa17.01■□□□□ 0.31
SNU13-204ENST00000402458 SEC31BQ9NQW1 1179 aa17.01■□□□□ 0.31
SNU13-204ENST00000402458 ZBTB40Q9NUA8 1239 aa17.01■□□□□ 0.31
SNU13-204ENST00000402458 WWC3Q9ULE0 1092 aa17.01■□□□□ 0.31
SNU13-204ENST00000402458 PPEF1O14829 653 aaPredicted RBP17■□□□□ 0.31
SNU13-204ENST00000402458 RPS8P62241 208 aaKnown RBP17■□□□□ 0.31
SNU13-204ENST00000402458 MPHOSPH8Q99549 860 aa17■□□□□ 0.31
SNU13-204ENST00000402458 C1orf115Q9H7X2 142 aa17■□□□□ 0.31
SNU13-204ENST00000402458 TAF1P21675 1872 aa16.99■□□□□ 0.31
SNU13-204ENST00000402458 SLX4Q8IY92 1834 aa16.99■□□□□ 0.31
SNU13-204ENST00000402458 AAMPQ13685 434 aa16.99■□□□□ 0.31
SNU13-204ENST00000402458 GPR162Q16538 588 aa16.99■□□□□ 0.31
SNU13-204ENST00000402458 SOGA3Q5TF21 947 aa16.99■□□□□ 0.31
SNU13-204ENST00000402458 SRGAP3O43295 1099 aa16.98■□□□□ 0.31
SNU13-204ENST00000402458 NEFLP07196 543 aa16.98■□□□□ 0.31
SNU13-204ENST00000402458 CELF1Q92879 486 aaKnown RBP16.98■□□□□ 0.31
SNU13-204ENST00000402458 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
SNU13-204ENST00000402458 ARFGEF1Q9Y6D6 1849 aa16.98■□□□□ 0.31
SNU13-204ENST00000402458 MTX1Q13505 466 aa16.97■□□□□ 0.31
SNU13-204ENST00000402458 CC2D2BQ6DHV5 1058 aa16.97■□□□□ 0.31
SNU13-204ENST00000402458 SPEF2Q9C093 1822 aa16.97■□□□□ 0.31
SNU13-204ENST00000402458 C21orf2O43822 256 aa16.96■□□□□ 0.31
SNU13-204ENST00000402458 IRX6P78412 446 aaPredicted RBP16.96■□□□□ 0.31
SNU13-204ENST00000402458 ATP8B2P98198 1209 aa16.96■□□□□ 0.31
SNU13-204ENST00000402458 GRIPAP1Q4V328 841 aa16.96■□□□□ 0.31
SNU13-204ENST00000402458 RPAP2Q8IXW5 612 aaPredicted RBP16.96■□□□□ 0.31
SNU13-204ENST00000402458 SP8Q8IXZ3 490 aa16.96■□□□□ 0.31
SNU13-204ENST00000402458 CNNM1Q9NRU3 951 aa16.96■□□□□ 0.31
SNU13-204ENST00000402458 BSDC1Q9NW68 430 aaPredicted RBP16.96■□□□□ 0.31
SNU13-204ENST00000402458 ATP6V0A2Q9Y487 856 aa16.96■□□□□ 0.31
SNU13-204ENST00000402458 HMMRO75330 724 aa16.95■□□□□ 0.3
SNU13-204ENST00000402458 CCDC93Q567U6 631 aa16.95■□□□□ 0.3
SNU13-204ENST00000402458 CEP85Q6P2H3 762 aa16.95■□□□□ 0.3
SNU13-204ENST00000402458 LDHAL6AQ6ZMR3 332 aa16.95■□□□□ 0.3
SNU13-204ENST00000402458 GRIN3BO60391 1043 aa16.94■□□□□ 0.3
SNU13-204ENST00000402458 RTKN2Q8IZC4 609 aa16.94■□□□□ 0.3
SNU13-204ENST00000402458 EXOC6Q8TAG9 804 aa16.94■□□□□ 0.3
SNU13-204ENST00000402458 ZNF594Q96JF6 807 aaPredicted RBP16.94■□□□□ 0.3
SNU13-204ENST00000402458 PNMA6EA0A0J9YXQ4 647 aa16.93■□□□□ 0.3
SNU13-204ENST00000402458 C7orf43Q8WVR3 580 aa16.93■□□□□ 0.3
SNU13-204ENST00000402458 YBX3P16989 372 aaKnown RBP eCLIP16.92■□□□□ 0.36e-12■■■□□ 16.1
SNU13-204ENST00000402458 RFX5P48382 616 aaPredicted RBP16.92■□□□□ 0.3
SNU13-204ENST00000402458 PTPN12Q05209 780 aaKnown RBP16.92■□□□□ 0.3
SNU13-204ENST00000402458 ARHGAP27Q6ZUM4 889 aa16.92■□□□□ 0.3
SNU13-204ENST00000402458 KLHDC4Q8TBB5 520 aa16.92■□□□□ 0.3
SNU13-204ENST00000402458 SSH3Q8TE77 659 aa16.92■□□□□ 0.3
SNU13-204ENST00000402458 ANKRD2Q9GZV1 360 aa16.92■□□□□ 0.3
SNU13-204ENST00000402458 COPRSQ9NQ92 184 aa16.92■□□□□ 0.3
SNU13-204ENST00000402458 ANKIB1Q9P2G1 1089 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms