RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 SMC1BQ8NDV3 1235 aa20.38■□□□□ 0.85
ATG4B-203ENST00000400772 JARID2Q92833 1246 aaPredicted RBP20.38■□□□□ 0.85
ATG4B-203ENST00000400772 CELF1Q92879 486 aaKnown RBP20.38■□□□□ 0.85
ATG4B-203ENST00000400772 L3MBTL3Q96JM7 780 aaPredicted RBP20.38■□□□□ 0.85
ATG4B-203ENST00000400772 RTFDC1Q9BY42 306 aaPredicted RBP20.38■□□□□ 0.85
ATG4B-203ENST00000400772 CWC25Q9NXE8 425 aaPredicted RBP20.38■□□□□ 0.85
ATG4B-203ENST00000400772 PCCAP05165 728 aaPredicted RBP20.37■□□□□ 0.85
ATG4B-203ENST00000400772 APLP1P51693 650 aa20.37■□□□□ 0.85
ATG4B-203ENST00000400772 COL4A1P02462 1669 aa20.36■□□□□ 0.85
ATG4B-203ENST00000400772 ZNF521Q96K83 1311 aa20.36■□□□□ 0.85
ATG4B-203ENST00000400772 JDP2Q8WYK2 163 aa20.36■□□□□ 0.85
ATG4B-203ENST00000400772 TMX4Q9H1E5 349 aaPredicted RBP20.36■□□□□ 0.85
ATG4B-203ENST00000400772 LARGE2Q8N3Y3 721 aa20.35■□□□□ 0.85
ATG4B-203ENST00000400772 MPNDQ8N594 471 aa20.35■□□□□ 0.85
ATG4B-203ENST00000400772 VPS33BQ9H267 617 aa20.35■□□□□ 0.85
ATG4B-203ENST00000400772 POTEIP0CG38 1075 aa20.34■□□□□ 0.85
ATG4B-203ENST00000400772 POTEJP0CG39 1038 aa20.34■□□□□ 0.85
ATG4B-203ENST00000400772 FLIIQ13045 1269 aa20.34■□□□□ 0.85
ATG4B-203ENST00000400772 AOC3Q16853 763 aa20.34■□□□□ 0.85
ATG4B-203ENST00000400772 DPP8Q6V1X1 898 aaPredicted RBP20.34■□□□□ 0.85
ATG4B-203ENST00000400772 TMC4Q7Z404 712 aa20.34■□□□□ 0.85
ATG4B-203ENST00000400772 IQCA1LA6NCM1 817 aa20.33■□□□□ 0.85
ATG4B-203ENST00000400772 PPIP5K2O43314 1243 aa20.33■□□□□ 0.85
ATG4B-203ENST00000400772 CWF19L2Q2TBE0 894 aaKnown RBP20.33■□□□□ 0.85
ATG4B-203ENST00000400772 GPC2Q8N158 579 aa20.33■□□□□ 0.85
ATG4B-203ENST00000400772 TAF1DQ9H5J8 278 aaPredicted RBP20.33■□□□□ 0.85
ATG4B-203ENST00000400772 MYH16Q9H6N6 1097 aa20.33■□□□□ 0.85
ATG4B-203ENST00000400772 SEC31BQ9NQW1 1179 aa20.33■□□□□ 0.85
ATG4B-203ENST00000400772 NEURL1BA8MQ27 555 aa20.32■□□□□ 0.84
ATG4B-203ENST00000400772 PDE8AO60658 829 aa20.32■□□□□ 0.84
ATG4B-203ENST00000400772 EIF6P56537 245 aaKnown RBP20.32■□□□□ 0.84
ATG4B-203ENST00000400772 HTRA3P83110 453 aa20.32■□□□□ 0.84
ATG4B-203ENST00000400772 DNAJC5GQ8N7S2 189 aa20.32■□□□□ 0.84
ATG4B-203ENST00000400772 SUPT20HQ8NEM7 779 aa20.32■□□□□ 0.84
ATG4B-203ENST00000400772 CDHR2Q9BYE9 1310 aa20.31■□□□□ 0.84
ATG4B-203ENST00000400772 HSP90B1P14625 803 aaKnown RBP20.31■□□□□ 0.84
ATG4B-203ENST00000400772 RPS8P62241 208 aaKnown RBP20.31■□□□□ 0.84
ATG4B-203ENST00000400772 NEXNQ0ZGT2 675 aa20.31■□□□□ 0.84
ATG4B-203ENST00000400772 NIM1KQ8IY84 436 aa20.31■□□□□ 0.84
ATG4B-203ENST00000400772 SCN4AP35499 1836 aa20.31■□□□□ 0.84
ATG4B-203ENST00000400772 KIAA2012Q0VF49 1180 aa20.3■□□□□ 0.84
ATG4B-203ENST00000400772 FKBP5Q13451 457 aaPredicted RBP20.3■□□□□ 0.84
ATG4B-203ENST00000400772 HACL1Q9UJ83 578 aa20.3■□□□□ 0.84
ATG4B-203ENST00000400772 LRRC37AA6NMS7 1700 aa20.3■□□□□ 0.84
ATG4B-203ENST00000400772 DUOX1Q9NRD9 1551 aa20.29■□□□□ 0.84
ATG4B-203ENST00000400772 H7C1W4 665 aa20.29■□□□□ 0.84
ATG4B-203ENST00000400772 GPSM2P81274 684 aa20.29■□□□□ 0.84
ATG4B-203ENST00000400772 CCDC152Q4G0S7 254 aa20.29■□□□□ 0.84
ATG4B-203ENST00000400772 CHADLQ6NUI6 762 aa20.29■□□□□ 0.84
ATG4B-203ENST00000400772 DNAAF4Q8WXU2 420 aa20.29■□□□□ 0.84
ATG4B-203ENST00000400772 CCDC85AQ96PX6 553 aaPredicted RBP20.29■□□□□ 0.84
ATG4B-203ENST00000400772 GJA3Q9Y6H8 435 aa20.29■□□□□ 0.84
ATG4B-203ENST00000400772 CACNA1FO60840 1977 aa20.28■□□□□ 0.84
ATG4B-203ENST00000400772 EPHX2P34913 555 aa20.28■□□□□ 0.84
ATG4B-203ENST00000400772 POLLQ9UGP5 575 aa20.28■□□□□ 0.84
ATG4B-203ENST00000400772 ZNRF3Q9ULT6 936 aa20.28■□□□□ 0.84
ATG4B-203ENST00000400772 NSFL1CQ9UNZ2 370 aaKnown RBP20.28■□□□□ 0.84
ATG4B-203ENST00000400772 SCNN1DP51172 638 aa20.27■□□□□ 0.84
ATG4B-203ENST00000400772 CTSWP56202 376 aa20.27■□□□□ 0.84
ATG4B-203ENST00000400772 CXCL9Q07325 125 aa20.27■□□□□ 0.84
ATG4B-203ENST00000400772 GCKRQ14397 625 aa20.27■□□□□ 0.84
ATG4B-203ENST00000400772 TTLL11Q8NHH1 800 aa20.27■□□□□ 0.84
ATG4B-203ENST00000400772 CCER2I3L3R5 266 aa20.26■□□□□ 0.83
ATG4B-203ENST00000400772 CASP7P55210 303 aa20.26■□□□□ 0.83
ATG4B-203ENST00000400772 LDHDQ86WU2 507 aa20.26■□□□□ 0.83
ATG4B-203ENST00000400772 LTBP1Q14766 1721 aa20.26■□□□□ 0.83
ATG4B-203ENST00000400772 YDJCA8MPS7 323 aa20.25■□□□□ 0.83
ATG4B-203ENST00000400772 F6X3S4 739 aa20.25■□□□□ 0.83
ATG4B-203ENST00000400772 EAPPQ56P03 285 aaPredicted RBP20.25■□□□□ 0.83
ATG4B-203ENST00000400772 UBE3BQ7Z3V4 1068 aa20.25■□□□□ 0.83
ATG4B-203ENST00000400772 LINS1Q8NG48 757 aa20.25■□□□□ 0.83
ATG4B-203ENST00000400772 EPS15P42566 896 aa20.24■□□□□ 0.83
ATG4B-203ENST00000400772 WASHC4Q2M389 1173 aa20.24■□□□□ 0.83
ATG4B-203ENST00000400772 TBC1D16Q8TBP0 767 aa20.24■□□□□ 0.83
ATG4B-203ENST00000400772 GREM2Q9H772 168 aa20.24■□□□□ 0.83
ATG4B-203ENST00000400772 PODXL2Q9NZ53 605 aa20.24■□□□□ 0.83
ATG4B-203ENST00000400772 ADAMTSL1Q8N6G6 1762 aa20.23■□□□□ 0.83
ATG4B-203ENST00000400772 C6orf229H3BNL8 230 aa20.23■□□□□ 0.83
ATG4B-203ENST00000400772 BEND3Q5T5X7 828 aa20.23■□□□□ 0.83
ATG4B-203ENST00000400772 PNMA8AQ86V59 439 aaPredicted RBP20.23■□□□□ 0.83
ATG4B-203ENST00000400772 GPR101Q96P66 508 aaPredicted RBP20.23■□□□□ 0.83
ATG4B-203ENST00000400772 PLA2G12BQ9BX93 195 aa20.23■□□□□ 0.83
ATG4B-203ENST00000400772 RIMBP2O15034 1052 aa20.22■□□□□ 0.83
ATG4B-203ENST00000400772 RAD17O75943 681 aa20.22■□□□□ 0.83
ATG4B-203ENST00000400772 ITGBL1O95965 494 aaPredicted RBP20.22■□□□□ 0.83
ATG4B-203ENST00000400772 SLFN5Q08AF3 891 aa20.22■□□□□ 0.83
ATG4B-203ENST00000400772 CIAPIN1Q6FI81 312 aa20.22■□□□□ 0.83
ATG4B-203ENST00000400772 ANKRD18AQ8IVF6 992 aa20.22■□□□□ 0.83
ATG4B-203ENST00000400772 PASKQ96RG2 1323 aa20.22■□□□□ 0.83
ATG4B-203ENST00000400772 E9PSI1 815 aa20.21■□□□□ 0.83
ATG4B-203ENST00000400772 LMOD1P29536 600 aaPredicted RBP20.21■□□□□ 0.83
ATG4B-203ENST00000400772 KLRG1Q96E93 195 aa20.21■□□□□ 0.83
ATG4B-203ENST00000400772 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
ATG4B-203ENST00000400772 GPRC5DQ9NZD1 345 aa20.21■□□□□ 0.83
ATG4B-203ENST00000400772 CLEC11AQ9Y240 323 aa20.21■□□□□ 0.83
ATG4B-203ENST00000400772 RTL9Q8NET4 1388 aa20.21■□□□□ 0.83
ATG4B-203ENST00000400772 CSF1RP07333 972 aa20.2■□□□□ 0.82
ATG4B-203ENST00000400772 GMPSP49915 693 aaPredicted RBP20.2■□□□□ 0.82
ATG4B-203ENST00000400772 CDC5LQ99459 802 aaKnown RBP20.2■□□□□ 0.82
ATG4B-203ENST00000400772 EYA3Q99504 573 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms