RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 CLUAP1Q96AJ1 413 aa22.94■■□□□ 1.26
SBF1-203ENST00000399627 PLA2G12BQ9BX93 195 aa22.94■■□□□ 1.26
SBF1-203ENST00000399627 CTSWP56202 376 aa22.93■■□□□ 1.26
SBF1-203ENST00000399627 CCDC85AQ96PX6 553 aaPredicted RBP22.93■■□□□ 1.26
SBF1-203ENST00000399627 NBPF7P0C2Y1 421 aaPredicted RBP22.92■■□□□ 1.26
SBF1-203ENST00000399627 CCDC152Q4G0S7 254 aa22.92■■□□□ 1.26
SBF1-203ENST00000399627 ARHGAP27Q6ZUM4 889 aa22.92■■□□□ 1.26
SBF1-203ENST00000399627 UTYO14607 1347 aa22.91■■□□□ 1.26
SBF1-203ENST00000399627 INTS3Q68E01 1043 aaKnown RBP22.91■■□□□ 1.26
SBF1-203ENST00000399627 TTLL11Q8NHH1 800 aa22.91■■□□□ 1.26
SBF1-203ENST00000399627 C7orf43Q8WVR3 580 aa22.91■■□□□ 1.26
SBF1-203ENST00000399627 USP44Q9H0E7 712 aa22.91■■□□□ 1.26
SBF1-203ENST00000399627 COL4A1P02462 1669 aa22.9■■□□□ 1.26
SBF1-203ENST00000399627 FER1L6Q2WGJ9 1857 aa22.9■■□□□ 1.26
SBF1-203ENST00000399627 GRAPQ13588 217 aa22.9■■□□□ 1.26
SBF1-203ENST00000399627 OLFM4Q6UX06 510 aa22.9■■□□□ 1.26
SBF1-203ENST00000399627 GRAPLQ8TC17 118 aaPredicted RBP22.9■■□□□ 1.26
SBF1-203ENST00000399627 SUCLG2Q96I99 432 aa22.9■■□□□ 1.26
SBF1-203ENST00000399627 SEC31BQ9NQW1 1179 aa22.9■■□□□ 1.26
SBF1-203ENST00000399627 PPEF1O14829 653 aaPredicted RBP22.89■■□□□ 1.25
SBF1-203ENST00000399627 FOXO4P98177 505 aa22.89■■□□□ 1.25
SBF1-203ENST00000399627 EPHA10Q5JZY3 1008 aa22.89■■□□□ 1.25
SBF1-203ENST00000399627 CELF1Q92879 486 aaKnown RBP22.89■■□□□ 1.25
SBF1-203ENST00000399627 CCDC88AQ3V6T2 1871 aa22.88■■□□□ 1.25
SBF1-203ENST00000399627 BBOX1O75936 387 aa22.88■■□□□ 1.25
SBF1-203ENST00000399627 SLC51AQ86UW1 340 aa22.88■■□□□ 1.25
SBF1-203ENST00000399627 DZIP1LQ8IYY4 767 aaKnown RBP22.88■■□□□ 1.25
SBF1-203ENST00000399627 TMEM57Q8N5G2 664 aa22.88■■□□□ 1.25
SBF1-203ENST00000399627 SBF1O95248 1867 aa22.88■■□□□ 1.25
SBF1-203ENST00000399627 CSF1RP07333 972 aa22.87■■□□□ 1.25
SBF1-203ENST00000399627 SOGA3Q5TF21 947 aa22.87■■□□□ 1.25
SBF1-203ENST00000399627 FTSJ3Q8IY81 847 aaKnown RBP22.87■■□□□ 1.25
SBF1-203ENST00000399627 KAZALD1Q96I82 304 aa22.87■■□□□ 1.25
SBF1-203ENST00000399627 GREM2Q9H772 168 aa22.87■■□□□ 1.25
SBF1-203ENST00000399627 SPEF2Q9C093 1822 aa22.87■■□□□ 1.25
SBF1-203ENST00000399627 PLIN1O60240 522 aa22.86■■□□□ 1.25
SBF1-203ENST00000399627 RLBP1P12271 317 aa22.86■■□□□ 1.25
SBF1-203ENST00000399627 CCDC93Q567U6 631 aa22.86■■□□□ 1.25
SBF1-203ENST00000399627 RTL9Q8NET4 1388 aa22.86■■□□□ 1.25
SBF1-203ENST00000399627 NFKBIEO00221 500 aa22.85■■□□□ 1.25
SBF1-203ENST00000399627 RPS8P62241 208 aaKnown RBP22.85■■□□□ 1.25
SBF1-203ENST00000399627 RASSF7Q02833 373 aa22.85■■□□□ 1.25
SBF1-203ENST00000399627 FAM161AQ3B820 660 aa22.85■■□□□ 1.25
SBF1-203ENST00000399627 LMBR1LQ6UX01 489 aa22.85■■□□□ 1.25
SBF1-203ENST00000399627 MEIS3Q99687 375 aa22.85■■□□□ 1.25
SBF1-203ENST00000399627 ATP6V0A2Q9Y487 856 aa22.85■■□□□ 1.25
SBF1-203ENST00000399627 UBTFL1P0CB47 393 aaPredicted RBP22.84■■□□□ 1.25
SBF1-203ENST00000399627 CHMP3Q9Y3E7 222 aa22.84■■□□□ 1.25
SBF1-203ENST00000399627 LRRC37AA6NMS7 1700 aa22.83■■□□□ 1.25
SBF1-203ENST00000399627 ITGA6P23229 1130 aa22.83■■□□□ 1.25
SBF1-203ENST00000399627 CC2D2BQ6DHV5 1058 aa22.83■■□□□ 1.25
SBF1-203ENST00000399627 TMC4Q7Z404 712 aa22.83■■□□□ 1.25
SBF1-203ENST00000399627 SP8Q8IXZ3 490 aa22.83■■□□□ 1.25
SBF1-203ENST00000399627 PANK1Q8TE04 598 aa22.83■■□□□ 1.25
SBF1-203ENST00000399627 BICC1Q9H694 974 aaKnown RBP22.83■■□□□ 1.25
SBF1-203ENST00000399627 GOLGB1Q14789 3259 aaKnown RBP22.83■■□□□ 1.25
SBF1-203ENST00000399627 ANKRD18AQ8IVF6 992 aa22.82■■□□□ 1.24
SBF1-203ENST00000399627 RTKN2Q8IZC4 609 aa22.82■■□□□ 1.24
SBF1-203ENST00000399627 ANKRD44Q8N8A2 993 aa22.82■■□□□ 1.24
SBF1-203ENST00000399627 CDC5LQ99459 802 aaKnown RBP22.82■■□□□ 1.24
SBF1-203ENST00000399627 SNED1Q8TER0 1413 aa22.82■■□□□ 1.24
SBF1-203ENST00000399627 MS4A1P11836 297 aa22.81■■□□□ 1.24
SBF1-203ENST00000399627 ITPRIPQ8IWB1 547 aa22.81■■□□□ 1.24
SBF1-203ENST00000399627 TMX4Q9H1E5 349 aaPredicted RBP22.81■■□□□ 1.24
SBF1-203ENST00000399627 TAOK3Q9H2K8 898 aa22.81■■□□□ 1.24
SBF1-203ENST00000399627 ANKRD18BA2A2Z9 1011 aa22.8■■□□□ 1.24
SBF1-203ENST00000399627 GNAI3P08754 354 aa22.8■■□□□ 1.24
SBF1-203ENST00000399627 PRELPP51888 382 aa22.8■■□□□ 1.24
SBF1-203ENST00000399627 RABL6Q3YEC7 729 aaPredicted RBP22.8■■□□□ 1.24
SBF1-203ENST00000399627 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.8■■□□□ 1.24
SBF1-203ENST00000399627 LTBP3Q9NS15 1303 aa22.8■■□□□ 1.24
SBF1-203ENST00000399627 FKBP4Q02790 459 aaKnown RBP eCLIP22.79■■□□□ 1.244e-6■■■■■ 31.1
SBF1-203ENST00000399627 IFIT5Q13325 482 aaKnown RBP22.79■■□□□ 1.24
SBF1-203ENST00000399627 LRRFIP2Q9Y608 721 aaKnown RBP22.79■■□□□ 1.24
SBF1-203ENST00000399627 DICER1Q9UPY3 1922 aaKnown RBP22.78■■□□□ 1.24
SBF1-203ENST00000399627 GRIPAP1Q4V328 841 aa22.78■■□□□ 1.24
SBF1-203ENST00000399627 HDAC5Q9UQL6 1122 aa22.78■■□□□ 1.24
SBF1-203ENST00000399627 LMNB1P20700 586 aa22.77■■□□□ 1.24
SBF1-203ENST00000399627 IGHMBP2P38935 993 aaKnown RBP22.77■■□□□ 1.24
SBF1-203ENST00000399627 CCDC57Q2TAC2 916 aa22.77■■□□□ 1.24
SBF1-203ENST00000399627 C9orf131Q5VYM1 1079 aa22.77■■□□□ 1.24
SBF1-203ENST00000399627 MPNDQ8N594 471 aa22.77■■□□□ 1.24
SBF1-203ENST00000399627 BSDC1Q9NW68 430 aaPredicted RBP22.77■■□□□ 1.24
SBF1-203ENST00000399627 GPSM2P81274 684 aa22.76■■□□□ 1.23
SBF1-203ENST00000399627 C20orf194Q5TEA3 1177 aa22.76■■□□□ 1.23
SBF1-203ENST00000399627 ZNF594Q96JF6 807 aaPredicted RBP22.76■■□□□ 1.23
SBF1-203ENST00000399627 PSMD1Q99460 953 aa22.76■■□□□ 1.23
SBF1-203ENST00000399627 RNF181Q9P0P0 153 aa22.76■■□□□ 1.23
SBF1-203ENST00000399627 TAF7LQ5H9L4 462 aa22.75■■□□□ 1.23
SBF1-203ENST00000399627 DPP8Q6V1X1 898 aaPredicted RBP22.75■■□□□ 1.23
SBF1-203ENST00000399627 MPHOSPH8Q99549 860 aa22.75■■□□□ 1.23
SBF1-203ENST00000399627 ZNF277Q9NRM2 450 aaPredicted RBP22.75■■□□□ 1.23
SBF1-203ENST00000399627 LTBP1Q14766 1721 aa22.74■■□□□ 1.23
SBF1-203ENST00000399627 PDE3AQ14432 1141 aa22.74■■□□□ 1.23
SBF1-203ENST00000399627 NSFL1CQ9UNZ2 370 aaKnown RBP22.74■■□□□ 1.23
SBF1-203ENST00000399627 COG6Q9Y2V7 657 aa22.74■■□□□ 1.23
SBF1-203ENST00000399627 DUOX1Q9NRD9 1551 aa22.73■■□□□ 1.23
SBF1-203ENST00000399627 UTRNP46939 3433 aa22.73■■□□□ 1.23
SBF1-203ENST00000399627 ZBTB7BO15156 539 aaPredicted RBP22.73■■□□□ 1.23
SBF1-203ENST00000399627 GNAI2P04899 355 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms