RNA–Protein interactions for RNA: ENST00000399600.8

SCIMP-201, Transcript of SLP adaptor and CSK interacting membrane protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCIMP, Length 1,173 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIMP-201ENST00000399600 SF3B3Q15393 1217 aaKnown RBP11.68□□□□□ -0.54
SCIMP-201ENST00000399600 BEND3Q5T5X7 828 aa11.68□□□□□ -0.54
SCIMP-201ENST00000399600 RBM17Q96I25 401 aaKnown RBP11.68□□□□□ -0.54
SCIMP-201ENST00000399600 DICER1Q9UPY3 1922 aaKnown RBP11.68□□□□□ -0.54
SCIMP-201ENST00000399600 NFKBIEO00221 500 aa11.67□□□□□ -0.54
SCIMP-201ENST00000399600 PRELPP51888 382 aa11.67□□□□□ -0.54
SCIMP-201ENST00000399600 BRPF1P55201 1214 aaPredicted RBP11.67□□□□□ -0.54
SCIMP-201ENST00000399600 BCL2L13Q9BXK5 485 aa11.67□□□□□ -0.54
SCIMP-201ENST00000399600 CDHR2Q9BYE9 1310 aa11.66□□□□□ -0.54
SCIMP-201ENST00000399600 PDE8AO60658 829 aa11.66□□□□□ -0.54
SCIMP-201ENST00000399600 RARSP54136 660 aaKnown RBP11.66□□□□□ -0.54
SCIMP-201ENST00000399600 SOGA3Q5TF21 947 aa11.66□□□□□ -0.54
SCIMP-201ENST00000399600 OLFM4Q6UX06 510 aa11.66□□□□□ -0.54
SCIMP-201ENST00000399600 ABCC4O15439 1325 aa11.65□□□□□ -0.54
SCIMP-201ENST00000399600 PTPRCP08575 1304 aa11.65□□□□□ -0.54
SCIMP-201ENST00000399600 LTBP3Q9NS15 1303 aa11.65□□□□□ -0.54
SCIMP-201ENST00000399600 BBOX1O75936 387 aa11.65□□□□□ -0.54
SCIMP-201ENST00000399600 HSP90B1P14625 803 aaKnown RBP11.65□□□□□ -0.54
SCIMP-201ENST00000399600 CASP7P55210 303 aa11.65□□□□□ -0.54
SCIMP-201ENST00000399600 RASSF7Q02833 373 aa11.65□□□□□ -0.54
SCIMP-201ENST00000399600 C9orf131Q5VYM1 1079 aa11.65□□□□□ -0.54
SCIMP-201ENST00000399600 DDX46Q7L014 1031 aaKnown RBP11.65□□□□□ -0.54
SCIMP-201ENST00000399600 UBE3BQ7Z3V4 1068 aa11.65□□□□□ -0.54
SCIMP-201ENST00000399600 SMC4Q9NTJ3 1288 aa11.65□□□□□ -0.54
SCIMP-201ENST00000399600 ALDH1L1O75891 902 aa11.64□□□□□ -0.55
SCIMP-201ENST00000399600 LMNB1P20700 586 aa11.64□□□□□ -0.55
SCIMP-201ENST00000399600 GRAPQ13588 217 aa11.64□□□□□ -0.55
SCIMP-201ENST00000399600 CCDC93Q567U6 631 aa11.64□□□□□ -0.55
SCIMP-201ENST00000399600 CC2D2BQ6DHV5 1058 aa11.64□□□□□ -0.55
SCIMP-201ENST00000399600 SLC4A10Q6U841 1118 aa11.64□□□□□ -0.55
SCIMP-201ENST00000399600 RTKN2Q8IZC4 609 aa11.64□□□□□ -0.55
SCIMP-201ENST00000399600 GRAPLQ8TC17 118 aaPredicted RBP11.64□□□□□ -0.55
SCIMP-201ENST00000399600 PLA2G12BQ9BX93 195 aa11.64□□□□□ -0.55
SCIMP-201ENST00000399600 NOB1Q9ULX3 412 aaKnown RBP11.64□□□□□ -0.55
SCIMP-201ENST00000399600 SNED1Q8TER0 1413 aa11.63□□□□□ -0.55
SCIMP-201ENST00000399600 PPEF1O14829 653 aaPredicted RBP11.63□□□□□ -0.55
SCIMP-201ENST00000399600 SLC51AQ86UW1 340 aa11.63□□□□□ -0.55
SCIMP-201ENST00000399600 SP8Q8IXZ3 490 aa11.63□□□□□ -0.55
SCIMP-201ENST00000399600 TTLL11Q8NHH1 800 aa11.63□□□□□ -0.55
SCIMP-201ENST00000399600 SRCIN1Q9C0H9 1055 aa11.63□□□□□ -0.55
SCIMP-201ENST00000399600 RNF181Q9P0P0 153 aa11.63□□□□□ -0.55
SCIMP-201ENST00000399600 ATP6V0A2Q9Y487 856 aa11.63□□□□□ -0.55
SCIMP-201ENST00000399600 COL4A1P02462 1669 aa11.62□□□□□ -0.55
SCIMP-201ENST00000399600 BCAR3O75815 825 aa11.62□□□□□ -0.55
SCIMP-201ENST00000399600 CTSWP56202 376 aa11.62□□□□□ -0.55
SCIMP-201ENST00000399600 RPS8P62241 208 aaKnown RBP11.62□□□□□ -0.55
SCIMP-201ENST00000399600 FKBP4Q02790 459 aaKnown RBP eCLIP11.62□□□□□ -0.55
SCIMP-201ENST00000399600 CCDC152Q4G0S7 254 aa11.62□□□□□ -0.55
SCIMP-201ENST00000399600 GRIPAP1Q4V328 841 aa11.62□□□□□ -0.55
SCIMP-201ENST00000399600 ZNF526Q8TF50 670 aaPredicted RBP11.62□□□□□ -0.55
SCIMP-201ENST00000399600 CELF1Q92879 486 aaKnown RBP11.62□□□□□ -0.55
SCIMP-201ENST00000399600 TAOK3Q9H2K8 898 aa11.62□□□□□ -0.55
SCIMP-201ENST00000399600 SEC31BQ9NQW1 1179 aa11.62□□□□□ -0.55
SCIMP-201ENST00000399600 GRM8O00222 908 aa11.61□□□□□ -0.55
SCIMP-201ENST00000399600 CSF1RP07333 972 aa11.61□□□□□ -0.55
SCIMP-201ENST00000399600 HSPA6P17066 643 aa11.61□□□□□ -0.55
SCIMP-201ENST00000399600 FOXO4P98177 505 aa11.61□□□□□ -0.55
SCIMP-201ENST00000399600 TMC4Q7Z404 712 aa11.61□□□□□ -0.55
SCIMP-201ENST00000399600 ARHGAP45Q92619 1136 aa11.61□□□□□ -0.55
SCIMP-201ENST00000399600 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
SCIMP-201ENST00000399600 PSMD1Q99460 953 aa11.61□□□□□ -0.55
SCIMP-201ENST00000399600 C9orf78Q9NZ63 289 aaPredicted RBP11.61□□□□□ -0.55
SCIMP-201ENST00000399600 UTYO14607 1347 aa11.6□□□□□ -0.55
SCIMP-201ENST00000399600 MKRN4PQ13434 485 aaPredicted RBP11.6□□□□□ -0.55
SCIMP-201ENST00000399600 IFFO2Q5TF58 517 aa11.6□□□□□ -0.55
SCIMP-201ENST00000399600 USP44Q9H0E7 712 aa11.6□□□□□ -0.55
SCIMP-201ENST00000399600 LRRC37AA6NMS7 1700 aa11.6□□□□□ -0.55
SCIMP-201ENST00000399600 RTL9Q8NET4 1388 aa11.59□□□□□ -0.55
SCIMP-201ENST00000399600 SPEF2Q9C093 1822 aa11.59□□□□□ -0.55
SCIMP-201ENST00000399600 NBPF7P0C2Y1 421 aaPredicted RBP11.59□□□□□ -0.55
SCIMP-201ENST00000399600 EPHA10Q5JZY3 1008 aa11.59□□□□□ -0.55
SCIMP-201ENST00000399600 MPNDQ8N594 471 aa11.59□□□□□ -0.55
SCIMP-201ENST00000399600 KAZALD1Q96I82 304 aa11.59□□□□□ -0.55
SCIMP-201ENST00000399600 RTFDC1Q9BY42 306 aaPredicted RBP11.59□□□□□ -0.55
SCIMP-201ENST00000399600 API5Q9BZZ5 524 aaKnown RBP11.59□□□□□ -0.55
SCIMP-201ENST00000399600 TMX4Q9H1E5 349 aaPredicted RBP11.59□□□□□ -0.55
SCIMP-201ENST00000399600 GREM2Q9H772 168 aa11.59□□□□□ -0.55
SCIMP-201ENST00000399600 ZNF277Q9NRM2 450 aaPredicted RBP11.59□□□□□ -0.55
SCIMP-201ENST00000399600 KIF16BQ96L93 1317 aa11.59□□□□□ -0.55
SCIMP-201ENST00000399600 ZC3H4Q9UPT8 1303 aaKnown RBP11.59□□□□□ -0.55
SCIMP-201ENST00000399600 TIAM2Q8IVF5 1701 aa11.58□□□□□ -0.56
SCIMP-201ENST00000399600 IPO8O15397 1037 aaKnown RBP11.58□□□□□ -0.56
SCIMP-201ENST00000399600 IARSP41252 1262 aaKnown RBP11.58□□□□□ -0.56
SCIMP-201ENST00000399600 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
SCIMP-201ENST00000399600 GLTPD2A6NH11 291 aa11.57□□□□□ -0.56
SCIMP-201ENST00000399600 ITGA6P23229 1130 aa11.57□□□□□ -0.56
SCIMP-201ENST00000399600 CCT4P50991 539 aaKnown RBP11.57□□□□□ -0.56
SCIMP-201ENST00000399600 INTS3Q68E01 1043 aaKnown RBP11.57□□□□□ -0.56
SCIMP-201ENST00000399600 LMBR1LQ6UX01 489 aa11.57□□□□□ -0.56
SCIMP-201ENST00000399600 DPP8Q6V1X1 898 aaPredicted RBP11.57□□□□□ -0.56
SCIMP-201ENST00000399600 SUCLG2Q96I99 432 aa11.57□□□□□ -0.56
SCIMP-201ENST00000399600 CDC5LQ99459 802 aaKnown RBP11.57□□□□□ -0.56
SCIMP-201ENST00000399600 VPS33BQ9H267 617 aa11.57□□□□□ -0.56
SCIMP-201ENST00000399600 BSDC1Q9NW68 430 aaPredicted RBP11.57□□□□□ -0.56
SCIMP-201ENST00000399600 NSFL1CQ9UNZ2 370 aaKnown RBP11.57□□□□□ -0.56
SCIMP-201ENST00000399600 TOMM70O94826 608 aa11.56□□□□□ -0.56
SCIMP-201ENST00000399600 TRIM27P14373 513 aa11.56□□□□□ -0.56
SCIMP-201ENST00000399600 APLP1P51693 650 aa11.56□□□□□ -0.56
SCIMP-201ENST00000399600 GPSM2P81274 684 aa11.56□□□□□ -0.56
SCIMP-201ENST00000399600 LTBP1Q14766 1721 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms