RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 PUS3Q9BZE2 481 aaKnown RBP18.46■□□□□ 0.55
COL25A1-201ENST00000399126 ATRNO75882 1429 aa18.46■□□□□ 0.55
COL25A1-201ENST00000399126 FAM177BA6PVY3 158 aa18.46■□□□□ 0.54
COL25A1-201ENST00000399126 ERC2O15083 957 aa18.46■□□□□ 0.54
COL25A1-201ENST00000399126 ESYT1Q9BSJ8 1104 aa18.46■□□□□ 0.54
COL25A1-201ENST00000399126 GLRX3O76003 335 aaKnown RBP18.45■□□□□ 0.54
COL25A1-201ENST00000399126 DBNLQ9UJU6 430 aaKnown RBP18.45■□□□□ 0.54
COL25A1-201ENST00000399126 ERVV-1B6SEH8 477 aa18.45■□□□□ 0.54
COL25A1-201ENST00000399126 TNNI3KQ59H18 835 aa18.45■□□□□ 0.54
COL25A1-201ENST00000399126 SEPT12Q8IYM1 358 aa18.45■□□□□ 0.54
COL25A1-201ENST00000399126 TRMT112Q9UI30 125 aaKnown RBP18.45■□□□□ 0.54
COL25A1-201ENST00000399126 FPGT-TNNI3KV9GXZ4 949 aa18.45■□□□□ 0.54
COL25A1-201ENST00000399126 CAMTA2O94983 1202 aa18.44■□□□□ 0.54
COL25A1-201ENST00000399126 BECN1Q14457 450 aa18.44■□□□□ 0.54
COL25A1-201ENST00000399126 HSP90AB3PQ58FF7 597 aa18.44■□□□□ 0.54
COL25A1-201ENST00000399126 TRPC5Q9UL62 973 aaPredicted RBP18.44■□□□□ 0.54
COL25A1-201ENST00000399126 NHSQ6T4R5 1651 aa18.44■□□□□ 0.54
COL25A1-201ENST00000399126 SBF2Q86WG5 1849 aa18.44■□□□□ 0.54
COL25A1-201ENST00000399126 CD2BP2O95400 341 aaKnown RBP18.44■□□□□ 0.54
COL25A1-201ENST00000399126 ZNF34Q8IZ26 560 aa18.44■□□□□ 0.54
COL25A1-201ENST00000399126 SPRYD3Q8NCJ5 442 aa18.44■□□□□ 0.54
COL25A1-201ENST00000399126 BOLA2Q9H3K6 86 aa18.43■□□□□ 0.54
COL25A1-201ENST00000399126 MYH3P11055 1940 aa18.43■□□□□ 0.54
COL25A1-201ENST00000399126 NDUFB9Q9Y6M9 179 aa18.43■□□□□ 0.54
COL25A1-201ENST00000399126 CNTROBQ8N137 903 aa18.42■□□□□ 0.54
COL25A1-201ENST00000399126 GPATCH3Q96I76 525 aa18.42■□□□□ 0.54
COL25A1-201ENST00000399126 DBNDD2Q9BQY9 259 aa18.42■□□□□ 0.54
COL25A1-201ENST00000399126 QTRT2Q9H974 415 aaKnown RBP18.42■□□□□ 0.54
COL25A1-201ENST00000399126 IRS4O14654 1257 aaPredicted RBP18.42■□□□□ 0.54
COL25A1-201ENST00000399126 SUSD4Q5VX71 490 aa18.42■□□□□ 0.54
COL25A1-201ENST00000399126 REC8O95072 547 aa18.41■□□□□ 0.54
COL25A1-201ENST00000399126 EDC3Q96F86 508 aaKnown RBP18.41■□□□□ 0.54
COL25A1-201ENST00000399126 PLA2G12BQ9BX93 195 aa18.41■□□□□ 0.54
COL25A1-201ENST00000399126 SLKQ9H2G2 1235 aaPredicted RBP18.41■□□□□ 0.54
COL25A1-201ENST00000399126 GREM2Q9H772 168 aa18.41■□□□□ 0.54
COL25A1-201ENST00000399126 EYA2O00167 538 aa18.41■□□□□ 0.54
COL25A1-201ENST00000399126 ONECUT3O60422 494 aaPredicted RBP18.41■□□□□ 0.54
COL25A1-201ENST00000399126 CSF1RP07333 972 aa18.41■□□□□ 0.54
COL25A1-201ENST00000399126 CCDC57Q2TAC2 916 aa18.41■□□□□ 0.54
COL25A1-201ENST00000399126 ANO2Q9NQ90 1003 aa18.41■□□□□ 0.54
COL25A1-201ENST00000399126 CDHR2Q9BYE9 1310 aa18.41■□□□□ 0.54
COL25A1-201ENST00000399126 TTLL11Q8NHH1 800 aa18.4■□□□□ 0.54
COL25A1-201ENST00000399126 ZNF831Q5JPB2 1677 aa18.4■□□□□ 0.54
COL25A1-201ENST00000399126 TIMM10P62072 90 aa18.4■□□□□ 0.54
COL25A1-201ENST00000399126 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
COL25A1-201ENST00000399126 HCLS1P14317 486 aaPredicted RBP18.39■□□□□ 0.54
COL25A1-201ENST00000399126 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.54
COL25A1-201ENST00000399126 CTSWP56202 376 aa18.39■□□□□ 0.53
COL25A1-201ENST00000399126 IL15P40933 162 aaPredicted RBP18.38■□□□□ 0.53
COL25A1-201ENST00000399126 NIP7Q9Y221 180 aaKnown RBP eCLIP18.38■□□□□ 0.53
COL25A1-201ENST00000399126 ITGA6P23229 1130 aa18.38■□□□□ 0.53
COL25A1-201ENST00000399126 NEUROD6Q96NK8 337 aa18.38■□□□□ 0.53
COL25A1-201ENST00000399126 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
COL25A1-201ENST00000399126 BCORQ6W2J9 1755 aa18.38■□□□□ 0.53
COL25A1-201ENST00000399126 BRWD3Q6RI45 1802 aa18.37■□□□□ 0.53
COL25A1-201ENST00000399126 IFIT5Q13325 482 aaKnown RBP18.37■□□□□ 0.53
COL25A1-201ENST00000399126 PALD1Q9ULE6 856 aa18.37■□□□□ 0.53
COL25A1-201ENST00000399126 SGSM2O43147 1006 aa18.36■□□□□ 0.53
COL25A1-201ENST00000399126 HSCBQ8IWL3 235 aa18.36■□□□□ 0.53
COL25A1-201ENST00000399126 CNTNAP4Q9C0A0 1308 aa18.36■□□□□ 0.53
COL25A1-201ENST00000399126 CIAO1O76071 339 aa18.36■□□□□ 0.53
COL25A1-201ENST00000399126 CHGBP05060 677 aa18.36■□□□□ 0.53
COL25A1-201ENST00000399126 EVI5LQ96CN4 794 aa18.36■□□□□ 0.53
COL25A1-201ENST00000399126 ZNF609O15014 1411 aa18.36■□□□□ 0.53
COL25A1-201ENST00000399126 LY75O60449 1722 aa18.35■□□□□ 0.53
COL25A1-201ENST00000399126 TAF1LQ8IZX4 1826 aa18.35■□□□□ 0.53
COL25A1-201ENST00000399126 SH3TC1Q8TE82 1336 aa18.35■□□□□ 0.53
COL25A1-201ENST00000399126 PDE8AO60658 829 aa18.35■□□□□ 0.53
COL25A1-201ENST00000399126 SRP68Q9UHB9 627 aaKnown RBP18.35■□□□□ 0.53
COL25A1-201ENST00000399126 DDX60Q8IY21 1712 aaKnown RBP18.35■□□□□ 0.53
COL25A1-201ENST00000399126 A0A1B0GUL7 405 aa18.35■□□□□ 0.53
COL25A1-201ENST00000399126 GNPATO15228 680 aa18.35■□□□□ 0.53
COL25A1-201ENST00000399126 FAM227BQ96M60 508 aa18.35■□□□□ 0.53
COL25A1-201ENST00000399126 UTP14AQ9BVJ6 771 aaKnown RBP18.35■□□□□ 0.53
COL25A1-201ENST00000399126 DIAPH3Q9NSV4 1193 aa18.35■□□□□ 0.53
COL25A1-201ENST00000399126 RIC1Q4ADV7 1423 aa18.34■□□□□ 0.53
COL25A1-201ENST00000399126 NTSR2O95665 410 aa18.34■□□□□ 0.53
COL25A1-201ENST00000399126 ATP5JP18859 108 aa18.34■□□□□ 0.53
COL25A1-201ENST00000399126 BICDL1Q6ZP65 573 aa18.34■□□□□ 0.53
COL25A1-201ENST00000399126 SNX21Q969T3 373 aa18.34■□□□□ 0.53
COL25A1-201ENST00000399126 DNAJC2Q99543 621 aaKnown RBP18.34■□□□□ 0.53
COL25A1-201ENST00000399126 ADORA1P30542 326 aa18.33■□□□□ 0.53
COL25A1-201ENST00000399126 FSD1Q9BTV5 496 aa18.33■□□□□ 0.53
COL25A1-201ENST00000399126 BCL2L12Q9HB09 334 aa18.33■□□□□ 0.53
COL25A1-201ENST00000399126 LDHAL6AQ6ZMR3 332 aa18.33■□□□□ 0.52
COL25A1-201ENST00000399126 ANTXR1Q9H6X2 564 aa18.33■□□□□ 0.52
COL25A1-201ENST00000399126 CEP126Q9P2H0 1117 aa18.33■□□□□ 0.52
COL25A1-201ENST00000399126 ANKRD18BA2A2Z9 1011 aa18.32■□□□□ 0.52
COL25A1-201ENST00000399126 NMIQ13287 307 aaPredicted RBP18.32■□□□□ 0.52
COL25A1-201ENST00000399126 USPL1Q5W0Q7 1092 aa18.32■□□□□ 0.52
COL25A1-201ENST00000399126 LSG1Q9H089 658 aaKnown RBP18.32■□□□□ 0.52
COL25A1-201ENST00000399126 LRRC4BQ9NT99 713 aa18.32■□□□□ 0.52
COL25A1-201ENST00000399126 DDX46Q7L014 1031 aaKnown RBP18.32■□□□□ 0.52
COL25A1-201ENST00000399126 GPR108Q9NPR9 543 aa18.32■□□□□ 0.52
COL25A1-201ENST00000399126 SEC31BQ9NQW1 1179 aa18.32■□□□□ 0.52
COL25A1-201ENST00000399126 RIPOR2Q9Y4F9 1068 aa18.32■□□□□ 0.52
COL25A1-201ENST00000399126 A0A0D9SFI3 127 aa18.31■□□□□ 0.52
COL25A1-201ENST00000399126 RABEP1Q15276 862 aa18.31■□□□□ 0.52
COL25A1-201ENST00000399126 PARP10Q53GL7 1025 aa18.31■□□□□ 0.52
COL25A1-201ENST00000399126 COL4A1P02462 1669 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms