RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 UBE3BQ7Z3V4 1068 aa13.22□□□□□ -0.29
CYCSP55-201ENST00000399027 FRAT1Q92837 279 aaPredicted RBP13.22□□□□□ -0.29
CYCSP55-201ENST00000399027 CNKSR1Q969H4 720 aa13.22□□□□□ -0.29
CYCSP55-201ENST00000399027 CRAMP1Q96RY5 1269 aa13.22□□□□□ -0.29
CYCSP55-201ENST00000399027 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.29
CYCSP55-201ENST00000399027 RPGRQ92834 1020 aaKnown RBP13.21□□□□□ -0.29
CYCSP55-201ENST00000399027 ZNF622Q969S3 477 aaKnown RBP eCLIP13.21□□□□□ -0.29
CYCSP55-201ENST00000399027 BCS1LQ9Y276 419 aa13.21□□□□□ -0.29
CYCSP55-201ENST00000399027 GOLGB1Q14789 3259 aaKnown RBP13.21□□□□□ -0.29
CYCSP55-201ENST00000399027 LTBP1Q14766 1721 aa13.21□□□□□ -0.3
CYCSP55-201ENST00000399027 RTL9Q8NET4 1388 aa13.2□□□□□ -0.3
CYCSP55-201ENST00000399027 GPR162Q16538 588 aa13.2□□□□□ -0.3
CYCSP55-201ENST00000399027 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
CYCSP55-201ENST00000399027 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
CYCSP55-201ENST00000399027 USP44Q9H0E7 712 aa13.2□□□□□ -0.3
CYCSP55-201ENST00000399027 C9orf78Q9NZ63 289 aaPredicted RBP13.2□□□□□ -0.3
CYCSP55-201ENST00000399027 TNNQ9UQP3 1299 aa13.2□□□□□ -0.3
CYCSP55-201ENST00000399027 SNED1Q8TER0 1413 aa13.2□□□□□ -0.3
CYCSP55-201ENST00000399027 DCAF8L1A6NGE4 600 aa13.19□□□□□ -0.3
CYCSP55-201ENST00000399027 GRIN3BO60391 1043 aa13.19□□□□□ -0.3
CYCSP55-201ENST00000399027 NBPF7P0C2Y1 421 aaPredicted RBP13.19□□□□□ -0.3
CYCSP55-201ENST00000399027 CTSWP56202 376 aa13.19□□□□□ -0.3
CYCSP55-201ENST00000399027 C7orf43Q8WVR3 580 aa13.19□□□□□ -0.3
CYCSP55-201ENST00000399027 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
CYCSP55-201ENST00000399027 CSF1RP07333 972 aa13.18□□□□□ -0.3
CYCSP55-201ENST00000399027 FOXO4P98177 505 aa13.18□□□□□ -0.3
CYCSP55-201ENST00000399027 CCDC152Q4G0S7 254 aa13.18□□□□□ -0.3
CYCSP55-201ENST00000399027 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
CYCSP55-201ENST00000399027 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
CYCSP55-201ENST00000399027 TTLL11Q8NHH1 800 aa13.18□□□□□ -0.3
CYCSP55-201ENST00000399027 TIAM2Q8IVF5 1701 aa13.17□□□□□ -0.3
CYCSP55-201ENST00000399027 GRAPQ13588 217 aa13.17□□□□□ -0.3
CYCSP55-201ENST00000399027 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
CYCSP55-201ENST00000399027 GRAPLQ8TC17 118 aaPredicted RBP13.17□□□□□ -0.3
CYCSP55-201ENST00000399027 CLUAP1Q96AJ1 413 aa13.17□□□□□ -0.3
CYCSP55-201ENST00000399027 KAZALD1Q96I82 304 aa13.17□□□□□ -0.3
CYCSP55-201ENST00000399027 C21orf2O43822 256 aa13.16□□□□□ -0.3
CYCSP55-201ENST00000399027 BBOX1O75936 387 aa13.16□□□□□ -0.3
CYCSP55-201ENST00000399027 MS4A1P11836 297 aa13.16□□□□□ -0.3
CYCSP55-201ENST00000399027 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
CYCSP55-201ENST00000399027 TMC4Q7Z404 712 aa13.16□□□□□ -0.3
CYCSP55-201ENST00000399027 TMEM57Q8N5G2 664 aa13.16□□□□□ -0.3
CYCSP55-201ENST00000399027 SUCLG2Q96I99 432 aa13.16□□□□□ -0.3
CYCSP55-201ENST00000399027 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.3
CYCSP55-201ENST00000399027 RLBP1P12271 317 aa13.15□□□□□ -0.3
CYCSP55-201ENST00000399027 RABL6Q3YEC7 729 aaPredicted RBP13.15□□□□□ -0.3
CYCSP55-201ENST00000399027 EPHA10Q5JZY3 1008 aa13.15□□□□□ -0.3
CYCSP55-201ENST00000399027 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.3
CYCSP55-201ENST00000399027 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
CYCSP55-201ENST00000399027 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.3
CYCSP55-201ENST00000399027 GREM2Q9H772 168 aa13.15□□□□□ -0.3
CYCSP55-201ENST00000399027 SEC31BQ9NQW1 1179 aa13.15□□□□□ -0.3
CYCSP55-201ENST00000399027 DUOX1Q9NRD9 1551 aa13.15□□□□□ -0.3
CYCSP55-201ENST00000399027 LTBP3Q9NS15 1303 aa13.14□□□□□ -0.31
CYCSP55-201ENST00000399027 GRIPAP1Q4V328 841 aa13.14□□□□□ -0.31
CYCSP55-201ENST00000399027 CCDC93Q567U6 631 aa13.14□□□□□ -0.31
CYCSP55-201ENST00000399027 SP8Q8IXZ3 490 aa13.14□□□□□ -0.31
CYCSP55-201ENST00000399027 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.14□□□□□ -0.31
CYCSP55-201ENST00000399027 MEIS3Q99687 375 aa13.14□□□□□ -0.31
CYCSP55-201ENST00000399027 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
CYCSP55-201ENST00000399027 UTRNP46939 3433 aa13.14□□□□□ -0.31
CYCSP55-201ENST00000399027 PLIN1O60240 522 aa13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 GNAI3P08754 354 aa13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 UBTFL1P0CB47 393 aaPredicted RBP13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 ITGA6P23229 1130 aa13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 RPS8P62241 208 aaKnown RBP13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 PDE3AQ14432 1141 aa13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 FAM161AQ3B820 660 aa13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 LMBR1LQ6UX01 489 aa13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 ANKRD44Q8N8A2 993 aa13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 CCDC85AQ96PX6 553 aaPredicted RBP13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 CDC5LQ99459 802 aaKnown RBP13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 BICC1Q9H694 974 aaKnown RBP13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 HDAC5Q9UQL6 1122 aa13.13□□□□□ -0.31
CYCSP55-201ENST00000399027 NFKBIEO00221 500 aa13.12□□□□□ -0.31
CYCSP55-201ENST00000399027 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
CYCSP55-201ENST00000399027 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
CYCSP55-201ENST00000399027 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
CYCSP55-201ENST00000399027 ANKRD18AQ8IVF6 992 aa13.12□□□□□ -0.31
CYCSP55-201ENST00000399027 RTKN2Q8IZC4 609 aa13.12□□□□□ -0.31
CYCSP55-201ENST00000399027 PANK1Q8TE04 598 aa13.12□□□□□ -0.31
CYCSP55-201ENST00000399027 ZNF219Q9P2Y4 722 aaPredicted RBP13.12□□□□□ -0.31
CYCSP55-201ENST00000399027 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
CYCSP55-201ENST00000399027 MVPQ14764 893 aaKnown RBP13.11□□□□□ -0.31
CYCSP55-201ENST00000399027 SLC51AQ86UW1 340 aa13.11□□□□□ -0.31
CYCSP55-201ENST00000399027 ITPRIPQ8IWB1 547 aa13.11□□□□□ -0.31
CYCSP55-201ENST00000399027 PSMD1Q99460 953 aa13.11□□□□□ -0.31
CYCSP55-201ENST00000399027 BSDC1Q9NW68 430 aaPredicted RBP13.11□□□□□ -0.31
CYCSP55-201ENST00000399027 PRELPP51888 382 aa13.1□□□□□ -0.31
CYCSP55-201ENST00000399027 RRP1P56182 461 aaKnown RBP13.1□□□□□ -0.31
CYCSP55-201ENST00000399027 FKBP4Q02790 459 aaKnown RBP eCLIP13.1□□□□□ -0.31
CYCSP55-201ENST00000399027 IFIT5Q13325 482 aaKnown RBP13.1□□□□□ -0.31
CYCSP55-201ENST00000399027 RTFDC1Q9BY42 306 aaPredicted RBP13.1□□□□□ -0.31
CYCSP55-201ENST00000399027 TAOK3Q9H2K8 898 aa13.1□□□□□ -0.31
CYCSP55-201ENST00000399027 LRRFIP2Q9Y608 721 aaKnown RBP13.1□□□□□ -0.31
CYCSP55-201ENST00000399027 PSME4Q14997 1843 aa13.1□□□□□ -0.31
CYCSP55-201ENST00000399027 IGHMBP2P38935 993 aaKnown RBP13.09□□□□□ -0.31
CYCSP55-201ENST00000399027 RASSF7Q02833 373 aa13.09□□□□□ -0.31
CYCSP55-201ENST00000399027 MTX1Q13505 466 aa13.09□□□□□ -0.31
CYCSP55-201ENST00000399027 CCDC57Q2TAC2 916 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms