RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 NBPF7P0C2Y1 421 aaPredicted RBP16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 METTL24Q5JXM2 366 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 ARFGAP3Q9NP61 516 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 G3V3G9 751 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 CAVIN2O95810 425 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 TOP1P11387 765 aaKnown RBP16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 DCAF8Q5TAQ9 597 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 MPHOSPH8Q99549 860 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 SBNO1A3KN83 1393 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 FILIP1LQ4L180 1135 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 IP6K1Q92551 441 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.95■□□□□ 0.36e-7■■■□□ 15.5
RPRD1A-202ENST00000399022 RBM8AQ9Y5S9 174 aaKnown RBP16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 TMEM2Q9UHN6 1383 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 GNG11P61952 73 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 RASSF4Q9H2L5 321 aa16.95■□□□□ 0.3
RPRD1A-202ENST00000399022 EFCAB6Q5THR3 1501 aa16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 SNRPA1P09661 255 aaKnown RBP16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 MCM6Q14566 821 aa16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 KIF4BQ2VIQ3 1234 aa16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 SYT10Q6XYQ8 523 aa16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 SMARCE1Q969G3 411 aa16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 BRD1O95696 1058 aa16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 CENPHQ9H3R5 247 aa16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 IBTKQ9P2D0 1353 aaPredicted RBP16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 MAP3K4Q9Y6R4 1608 aa16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 ERO1AQ96HE7 468 aa16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
RPRD1A-202ENST00000399022 NAP1L1P55209 391 aaKnown RBP16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 LINS1Q8NG48 757 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 NUTM2BA6NNL0 878 aaPredicted RBP16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 NUTM2EB1AL46 878 aaPredicted RBP16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 RAD21O60216 631 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 AK2P54819 239 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 ISM2Q6H9L7 571 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 NUTM2AQ8IVF1 878 aaPredicted RBP16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 JMYQ8N9B5 988 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 PRR36Q9H6K5 1346 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 CCAR1Q8IX12 1150 aaKnown RBP16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 IL17REQ8NFR9 667 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 KLHDC4Q8TBB5 520 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 MARCH6O60337 910 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 HAND2P61296 217 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 RSPH14Q9UHP6 348 aa16.93■□□□□ 0.3
RPRD1A-202ENST00000399022 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
RPRD1A-202ENST00000399022 LMBR1LQ6UX01 489 aa16.92■□□□□ 0.3
RPRD1A-202ENST00000399022 RAB11FIP4Q86YS3 637 aa16.92■□□□□ 0.3
RPRD1A-202ENST00000399022 DHX37Q8IY37 1157 aaKnown RBP16.92■□□□□ 0.3
RPRD1A-202ENST00000399022 PYCARDQ9ULZ3 195 aa16.92■□□□□ 0.3
RPRD1A-202ENST00000399022 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
RPRD1A-202ENST00000399022 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
RPRD1A-202ENST00000399022 KCNQ3O43525 872 aa16.92■□□□□ 0.3
RPRD1A-202ENST00000399022 CDR1P51861 262 aa16.92■□□□□ 0.3
RPRD1A-202ENST00000399022 LRMPQ12912 555 aa16.92■□□□□ 0.3
RPRD1A-202ENST00000399022 SART3Q15020 963 aaKnown RBP16.91■□□□□ 0.3
RPRD1A-202ENST00000399022 SIRT2Q8IXJ6 389 aa16.91■□□□□ 0.3
RPRD1A-202ENST00000399022 CRACR2AQ9BSW2 395 aa16.91■□□□□ 0.3
RPRD1A-202ENST00000399022 GBP3Q9H0R5 595 aa16.91■□□□□ 0.3
RPRD1A-202ENST00000399022 CTNNA3Q9UI47 895 aa16.91■□□□□ 0.3
RPRD1A-202ENST00000399022 MADDQ8WXG6 1647 aa16.91■□□□□ 0.3
RPRD1A-202ENST00000399022 FAM173BQ6P4H8 233 aa16.91■□□□□ 0.3
RPRD1A-202ENST00000399022 KRBA2Q6ZNG9 492 aa16.91■□□□□ 0.3
RPRD1A-202ENST00000399022 RTL1A6NKG5 1358 aa16.91■□□□□ 0.3
RPRD1A-202ENST00000399022 RNMTO43148 476 aaKnown RBP16.91■□□□□ 0.3
RPRD1A-202ENST00000399022 CAPN2P17655 700 aa16.91■□□□□ 0.3
RPRD1A-202ENST00000399022 STARD3NLO95772 234 aa16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 AOPEPQ8N6M6 819 aa16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 NUP133Q8WUM0 1156 aa16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 NMIQ13287 307 aaPredicted RBP16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 IMMTQ16891 758 aaKnown RBP16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 ABCC3O15438 1527 aa16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 IFIT5Q13325 482 aaKnown RBP16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 CCDC150Q8NCX0 1101 aa16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 NSFL1CQ9UNZ2 370 aaKnown RBP16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 E9PCH4 1651 aa16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 CALRP27797 417 aaKnown RBP16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 MNAT1P51948 309 aa16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 ATP2B3Q16720 1220 aa16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 BRF1Q92994 677 aa16.9■□□□□ 0.3
RPRD1A-202ENST00000399022 NPHP3Q7Z494 1330 aa16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 TMX4Q9H1E5 349 aaPredicted RBP16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 BICC1Q9H694 974 aaKnown RBP16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 NEK1Q96PY6 1258 aa16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 EPB41L2O43491 1005 aaKnown RBP16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 SLC3A2P08195 630 aaKnown RBP16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 CCDC82Q8N4S0 544 aa16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 GIMAP7Q8NHV1 300 aa16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 USP44Q9H0E7 712 aa16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 CWC25Q9NXE8 425 aaPredicted RBP16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 ABCF2Q9UG63 623 aa16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 SPHKAPQ2M3C7 1700 aa16.89■□□□□ 0.29
RPRD1A-202ENST00000399022 ZNF215Q9UL58 517 aaPredicted RBP16.88■□□□□ 0.29
RPRD1A-202ENST00000399022 KIF5CO60282 957 aa16.88■□□□□ 0.29
RPRD1A-202ENST00000399022 CCDC12Q8WUD4 166 aaPredicted RBP16.88■□□□□ 0.29
RPRD1A-202ENST00000399022 BICDL1Q6ZP65 573 aa16.88■□□□□ 0.29
RPRD1A-202ENST00000399022 ROBO2Q9HCK4 1378 aa16.88■□□□□ 0.29
RPRD1A-202ENST00000399022 RNF17Q9BXT8 1623 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms