RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 TSGA10Q9BZW7 698 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 CCDC8Q9H0W5 538 aaPredicted RBP9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 USP25Q9UHP3 1055 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 ABCC1P33527 1531 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 PPIP5K1Q6PFW1 1433 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 MAST1Q9Y2H9 1570 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 PIP4K2BP78356 416 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 KLHL10Q6JEL2 608 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 TSNARE1Q96NA8 513 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 KIAA0556O60303 1618 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 GSTTP1A0A1W2PQM5 241 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 ANKRD44Q8N8A2 993 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 BABAM1Q9NWV8 329 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 ORC3Q9UBD5 711 aaPredicted RBP9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 AOX1Q06278 1338 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 TUBB2AQ13885 445 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 MRPL50Q8N5N7 158 aaKnown RBP9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 FAM200AQ8TCP9 573 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 TUBB2BQ9BVA1 445 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 PLXNC1O60486 1568 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 BICDL2A1A5D9 508 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 ZNF165P49910 485 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 C20orf194Q5TEA3 1177 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 MRPS27Q92552 414 aaKnown RBP9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 ESYT1Q9BSJ8 1104 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 CABP5Q9NP86 173 aa9.57□□□□□ -0.88
SPTLC3-201ENST00000399002 TBCAO75347 108 aaKnown RBP9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 SYKP43405 635 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 KRT83P78385 493 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 ST5P78524 1137 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 ATP8B2P98198 1209 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 MCMDC2Q4G0Z9 681 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 INTS4Q96HW7 963 aaKnown RBP9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 ERICH4A6NGS2 130 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 STK24Q9Y6E0 443 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 WTAPQ15007 396 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 RHPN1Q8TCX5 695 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 TMX3Q96JJ7 454 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 A2MP01023 1474 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 DNMT1P26358 1616 aaKnown RBP9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 AKAP4Q5JQC9 854 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 CEP128Q6ZU80 1094 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 WAPLQ7Z5K2 1190 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 MIS18AQ9NYP9 233 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 FSD2A1L4K1 749 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 BRAPQ7Z569 592 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 ESR2Q92731 530 aa9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 SPINK5Q9NQ38 1064 aaPredicted RBP9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 RBM28Q9NW13 759 aaKnown RBP9.56□□□□□ -0.88
SPTLC3-201ENST00000399002 IL15P40933 162 aaPredicted RBP9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 UBA7P41226 1012 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 KRT222Q8N1A0 295 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 CTNNA2P26232 953 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 DDX46Q7L014 1031 aaKnown RBP9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 WDR62O43379 1518 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 ZMYM4Q5VZL5 1548 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 SYCP2Q9BX26 1530 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 CTAGE15A4D2H0 777 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 F13A1P00488 732 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 CTAGE8P0CG41 777 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 CTAGE6Q86UF2 777 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 CTAGE4Q8IX94 777 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 UBA5Q9GZZ9 404 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 DMRT2Q9Y5R5 561 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 ADAMTS12P58397 1594 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 SPATA24Q86W54 205 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 CKAP2LQ8IYA6 745 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 TTC14Q96N46 770 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 CCDC113Q9H0I3 377 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 ADGBQ8N7X0 1667 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 NUTM2BA6NNL0 878 aaPredicted RBP9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 NUTM2EB1AL46 878 aaPredicted RBP9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 CALML3P27482 149 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 BICDL1Q6ZP65 573 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 NUTM2AQ8IVF1 878 aaPredicted RBP9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 SMC5Q8IY18 1101 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 SCLT1Q96NL6 688 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 SLC26A6Q9BXS9 759 aa9.55□□□□□ -0.88
SPTLC3-201ENST00000399002 KIF24Q5T7B8 1368 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 ZBTB43O43298 467 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 CLCN1P35523 988 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 STAT6P42226 847 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 TRIM47Q96LD4 638 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 TSPY2A6NKD2 308 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 FERP16591 822 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 UBASH3AP57075 661 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 THUMPD2Q9BTF0 503 aaKnown RBP9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 UHRF1BP1LA0JNW5 1464 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 EXOC5O00471 708 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 XPCQ01831 940 aaPredicted RBP9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 RTN1Q16799 776 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 C16orf45Q96MC5 204 aaPredicted RBP9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 NYXQ9GZU5 481 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.54□□□□□ -0.885e-7■■■■□ 20.6
SPTLC3-201ENST00000399002 NPC1L1Q9UHC9 1359 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 F6X3S4 739 aa9.54□□□□□ -0.88
SPTLC3-201ENST00000399002 TACC1O75410 805 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms