RNA–Protein interactions for RNA: ENST00000398989.2

TUBA4A-203, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-203ENST00000398989 TRMT2AQ8IZ69 625 aaKnown RBP17.79■□□□□ 0.44
TUBA4A-203ENST00000398989 PSMD1Q99460 953 aa17.79■□□□□ 0.44
TUBA4A-203ENST00000398989 NMRK2Q9NPI5 230 aa17.79■□□□□ 0.44
TUBA4A-203ENST00000398989 COL4A1P02462 1669 aa17.79■□□□□ 0.44
TUBA4A-203ENST00000398989 LRRC37AA6NMS7 1700 aa17.78■□□□□ 0.44
TUBA4A-203ENST00000398989 CDHR2Q9BYE9 1310 aa17.78■□□□□ 0.44
TUBA4A-203ENST00000398989 PDE8AO60658 829 aa17.78■□□□□ 0.44
TUBA4A-203ENST00000398989 LINS1Q8NG48 757 aa17.78■□□□□ 0.44
TUBA4A-203ENST00000398989 IARSP41252 1262 aaKnown RBP17.77■□□□□ 0.44
TUBA4A-203ENST00000398989 GCKRQ14397 625 aa17.77■□□□□ 0.44
TUBA4A-203ENST00000398989 UBE3BQ7Z3V4 1068 aa17.77■□□□□ 0.44
TUBA4A-203ENST00000398989 CELF1Q92879 486 aaKnown RBP17.77■□□□□ 0.44
TUBA4A-203ENST00000398989 GLTPD2A6NH11 291 aa17.76■□□□□ 0.43
TUBA4A-203ENST00000398989 KIF3CO14782 793 aa17.76■□□□□ 0.43
TUBA4A-203ENST00000398989 C1QTNF8P60827 252 aa17.76■□□□□ 0.43
TUBA4A-203ENST00000398989 CCDC152Q4G0S7 254 aa17.76■□□□□ 0.43
TUBA4A-203ENST00000398989 TMC4Q7Z404 712 aa17.76■□□□□ 0.43
TUBA4A-203ENST00000398989 SP8Q8IXZ3 490 aa17.76■□□□□ 0.43
TUBA4A-203ENST00000398989 MRPL50Q8N5N7 158 aaKnown RBP17.76■□□□□ 0.43
TUBA4A-203ENST00000398989 CCDC85AQ96PX6 553 aaPredicted RBP17.76■□□□□ 0.43
TUBA4A-203ENST00000398989 SPEF2Q9C093 1822 aa17.75■□□□□ 0.43
TUBA4A-203ENST00000398989 H7C1W4 665 aa17.75■□□□□ 0.43
TUBA4A-203ENST00000398989 HNRNPUQ00839 825 aaKnown RBP eCLIP17.75■□□□□ 0.43
TUBA4A-203ENST00000398989 DPY19L2Q6NUT2 758 aa17.75■□□□□ 0.43
TUBA4A-203ENST00000398989 SSH1Q8WYL5 1049 aa17.75■□□□□ 0.43
TUBA4A-203ENST00000398989 BCL2L13Q9BXK5 485 aa17.75■□□□□ 0.43
TUBA4A-203ENST00000398989 RRAGCQ9HB90 399 aa17.75■□□□□ 0.43
TUBA4A-203ENST00000398989 SEC31BQ9NQW1 1179 aa17.75■□□□□ 0.43
TUBA4A-203ENST00000398989 CTSWP56202 376 aa17.74■□□□□ 0.43
TUBA4A-203ENST00000398989 BEND3Q5T5X7 828 aa17.74■□□□□ 0.43
TUBA4A-203ENST00000398989 SLC4A10Q6U841 1118 aa17.74■□□□□ 0.43
TUBA4A-203ENST00000398989 DPP8Q6V1X1 898 aaPredicted RBP17.74■□□□□ 0.43
TUBA4A-203ENST00000398989 COL4A5P29400 1685 aa17.74■□□□□ 0.43
TUBA4A-203ENST00000398989 WDR90Q96KV7 1748 aa17.73■□□□□ 0.43
TUBA4A-203ENST00000398989 RPS8P62241 208 aaKnown RBP17.73■□□□□ 0.43
TUBA4A-203ENST00000398989 MPNDQ8N594 471 aa17.73■□□□□ 0.43
TUBA4A-203ENST00000398989 JDP2Q8WYK2 163 aa17.73■□□□□ 0.43
TUBA4A-203ENST00000398989 DUOX1Q9NRD9 1551 aa17.72■□□□□ 0.43
TUBA4A-203ENST00000398989 CT47B1P0C2W7 299 aaPredicted RBP17.72■□□□□ 0.43
TUBA4A-203ENST00000398989 ALDH1L2Q3SY69 923 aa17.72■□□□□ 0.43
TUBA4A-203ENST00000398989 LARGE2Q8N3Y3 721 aa17.72■□□□□ 0.43
TUBA4A-203ENST00000398989 SUPT20HQ8NEM7 779 aa17.72■□□□□ 0.43
TUBA4A-203ENST00000398989 SMC4Q9NTJ3 1288 aa17.72■□□□□ 0.43
TUBA4A-203ENST00000398989 PTPRCP08575 1304 aa17.72■□□□□ 0.43
TUBA4A-203ENST00000398989 PPIP5K2O43314 1243 aa17.71■□□□□ 0.43
TUBA4A-203ENST00000398989 DDNO94850 711 aaPredicted RBP17.71■□□□□ 0.43
TUBA4A-203ENST00000398989 CASP7P55210 303 aa17.71■□□□□ 0.43
TUBA4A-203ENST00000398989 AOC3Q16853 763 aa17.71■□□□□ 0.43
TUBA4A-203ENST00000398989 C16orf71Q8IYS4 520 aaPredicted RBP17.71■□□□□ 0.43
TUBA4A-203ENST00000398989 TTLL11Q8NHH1 800 aa17.71■□□□□ 0.43
TUBA4A-203ENST00000398989 RTFDC1Q9BY42 306 aaPredicted RBP17.71■□□□□ 0.43
TUBA4A-203ENST00000398989 LTBP1Q14766 1721 aa17.71■□□□□ 0.43
TUBA4A-203ENST00000398989 ZNF541Q9H0D2 1346 aa17.71■□□□□ 0.42
TUBA4A-203ENST00000398989 FZD9O00144 591 aa17.7■□□□□ 0.42
TUBA4A-203ENST00000398989 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
TUBA4A-203ENST00000398989 GREM2Q9H772 168 aa17.7■□□□□ 0.42
TUBA4A-203ENST00000398989 NSFL1CQ9UNZ2 370 aaKnown RBP17.7■□□□□ 0.42
TUBA4A-203ENST00000398989 ALDH1L1O75891 902 aa17.69■□□□□ 0.42
TUBA4A-203ENST00000398989 TOMM70O94826 608 aa17.69■□□□□ 0.42
TUBA4A-203ENST00000398989 VEGFAP15692 232 aaPredicted RBP17.69■□□□□ 0.42
TUBA4A-203ENST00000398989 ANKRD18AQ8IVF6 992 aa17.69■□□□□ 0.42
TUBA4A-203ENST00000398989 CDC5LQ99459 802 aaKnown RBP17.69■□□□□ 0.42
TUBA4A-203ENST00000398989 PLA2G12BQ9BX93 195 aa17.69■□□□□ 0.42
TUBA4A-203ENST00000398989 VPS33BQ9H267 617 aa17.69■□□□□ 0.42
TUBA4A-203ENST00000398989 RTL9Q8NET4 1388 aa17.68■□□□□ 0.42
TUBA4A-203ENST00000398989 GRM8O00222 908 aa17.68■□□□□ 0.42
TUBA4A-203ENST00000398989 GPSM2P81274 684 aa17.68■□□□□ 0.42
TUBA4A-203ENST00000398989 NIM1KQ8IY84 436 aa17.68■□□□□ 0.42
TUBA4A-203ENST00000398989 C9orf78Q9NZ63 289 aaPredicted RBP17.68■□□□□ 0.42
TUBA4A-203ENST00000398989 SCN4AP35499 1836 aa17.68■□□□□ 0.42
TUBA4A-203ENST00000398989 POTECB2RU33 542 aa17.67■□□□□ 0.42
TUBA4A-203ENST00000398989 EIF6P56537 245 aaKnown RBP17.67■□□□□ 0.42
TUBA4A-203ENST00000398989 FAM161AQ3B820 660 aa17.67■□□□□ 0.42
TUBA4A-203ENST00000398989 ANKIB1Q9P2G1 1089 aa17.67■□□□□ 0.42
TUBA4A-203ENST00000398989 C6orf229H3BNL8 230 aa17.66■□□□□ 0.42
TUBA4A-203ENST00000398989 KIAA2012Q0VF49 1180 aa17.66■□□□□ 0.42
TUBA4A-203ENST00000398989 POLLQ9UGP5 575 aa17.66■□□□□ 0.42
TUBA4A-203ENST00000398989 CSF1RP07333 972 aa17.65■□□□□ 0.42
TUBA4A-203ENST00000398989 ITGA6P23229 1130 aa17.65■□□□□ 0.42
TUBA4A-203ENST00000398989 RARSP54136 660 aaKnown RBP17.65■□□□□ 0.42
TUBA4A-203ENST00000398989 FOXO4P98177 505 aa17.65■□□□□ 0.42
TUBA4A-203ENST00000398989 WASHC4Q2M389 1173 aa17.65■□□□□ 0.42
TUBA4A-203ENST00000398989 GPC2Q8N158 579 aa17.65■□□□□ 0.42
TUBA4A-203ENST00000398989 RBM46Q8TBY0 533 aaKnown RBP17.65■□□□□ 0.42
TUBA4A-203ENST00000398989 L3MBTL3Q96JM7 780 aaPredicted RBP17.65■□□□□ 0.42
TUBA4A-203ENST00000398989 GJA3Q9Y6H8 435 aa17.65■□□□□ 0.42
TUBA4A-203ENST00000398989 TBC1D16Q8TBP0 767 aa17.64■□□□□ 0.41
TUBA4A-203ENST00000398989 BSDC1Q9NW68 430 aaPredicted RBP17.64■□□□□ 0.41
TUBA4A-203ENST00000398989 PODXL2Q9NZ53 605 aa17.64■□□□□ 0.41
TUBA4A-203ENST00000398989 ZNRF3Q9ULT6 936 aa17.64■□□□□ 0.41
TUBA4A-203ENST00000398989 NOB1Q9ULX3 412 aaKnown RBP17.64■□□□□ 0.41
TUBA4A-203ENST00000398989 CHMP3Q9Y3E7 222 aa17.64■□□□□ 0.41
TUBA4A-203ENST00000398989 ZBED9Q6R2W3 1325 aa17.64■□□□□ 0.41
TUBA4A-203ENST00000398989 IQCA1LA6NCM1 817 aa17.63■□□□□ 0.41
TUBA4A-203ENST00000398989 RIMBP2O15034 1052 aa17.63■□□□□ 0.41
TUBA4A-203ENST00000398989 UFL1O94874 794 aa17.63■□□□□ 0.41
TUBA4A-203ENST00000398989 NBPF7P0C2Y1 421 aaPredicted RBP17.63■□□□□ 0.41
TUBA4A-203ENST00000398989 IGHMBP2P38935 993 aaKnown RBP17.63■□□□□ 0.41
TUBA4A-203ENST00000398989 EPHA10Q5JZY3 1008 aa17.63■□□□□ 0.41
TUBA4A-203ENST00000398989 GPR101Q96P66 508 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms