RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 JAKMIP3Q5VZ66 844 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 TMOD3Q9NYL9 352 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 NPHP3Q7Z494 1330 aa10.77□□□□□ -0.69
CDH23-203ENST00000398788 MINDY4BA8MYZ0 360 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 TYRO3Q06418 890 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 FLIIQ13045 1269 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 ZNF396Q96N95 335 aaPredicted RBP10.76□□□□□ -0.69
CDH23-203ENST00000398788 PLEKHA4Q9H4M7 779 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 GNL3LQ9NVN8 582 aaKnown RBP10.76□□□□□ -0.69
CDH23-203ENST00000398788 RIMS2Q9UQ26 1411 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 PI4KAP2A4QPH2 592 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 PNMA6AP0CW24 399 aaPredicted RBP10.76□□□□□ -0.69
CDH23-203ENST00000398788 PI4KAP1Q8N8J0 262 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 A0A087WZG4 1122 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 PER1O15534 1290 aaPredicted RBP10.76□□□□□ -0.69
CDH23-203ENST00000398788 CTIFO43310 598 aaKnown RBP10.76□□□□□ -0.69
CDH23-203ENST00000398788 NEMFO60524 1076 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 CLCN6P51797 869 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 SYCP1Q15431 976 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 ZSCAN29Q8IWY8 852 aaPredicted RBP10.76□□□□□ -0.69
CDH23-203ENST00000398788 NCKAP5LQ9HCH0 1330 aa10.76□□□□□ -0.69
CDH23-203ENST00000398788 DCAF8L1A6NGE4 600 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 HMGB2P26583 209 aaKnown RBP10.75□□□□□ -0.69
CDH23-203ENST00000398788 PIP4K2AP48426 406 aaPredicted RBP10.75□□□□□ -0.69
CDH23-203ENST00000398788 LIG3P49916 1009 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 ST5P78524 1137 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 RAB11FIP3O75154 756 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 GLRX3O76003 335 aaKnown RBP10.75□□□□□ -0.69
CDH23-203ENST00000398788 EVCP57679 992 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 CDK5RAP3Q96JB5 506 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 FAM107BQ9H098 131 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.75□□□□□ -0.69
CDH23-203ENST00000398788 CPSF2Q9P2I0 782 aaKnown RBP10.75□□□□□ -0.69
CDH23-203ENST00000398788 TFIP11Q9UBB9 837 aaKnown RBP10.75□□□□□ -0.69
CDH23-203ENST00000398788 TBX22Q9Y458 520 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 KRT18P05783 430 aaKnown RBP10.75□□□□□ -0.69
CDH23-203ENST00000398788 KCNA6P17658 529 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 DNM1Q05193 864 aaKnown RBP10.75□□□□□ -0.69
CDH23-203ENST00000398788 RAB11FIP4Q86YS3 637 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 ERCC4Q92889 916 aaPredicted RBP10.75□□□□□ -0.69
CDH23-203ENST00000398788 TCEANC2Q96MN5 208 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 STX6O43752 255 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 SATB1Q01826 763 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 ANKRD1Q15327 319 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 MCTP2Q6DN12 878 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 SMARCC1Q92922 1105 aaPredicted RBP10.75□□□□□ -0.69
CDH23-203ENST00000398788 UBAC1Q9BSL1 405 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 CARD6Q9BX69 1037 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 MBIPQ9NS73 344 aa10.75□□□□□ -0.69
CDH23-203ENST00000398788 RBM28Q9NW13 759 aaKnown RBP10.75□□□□□ -0.69
CDH23-203ENST00000398788 ZMYM4Q5VZL5 1548 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 CCP110O43303 1012 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 ERLIN2O94905 339 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 RNF187Q5TA31 235 aaPredicted RBP10.74□□□□□ -0.69
CDH23-203ENST00000398788 USP16Q9Y5T5 823 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 ARHGEF5Q12774 1597 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 SPATA31E1Q6ZUB1 1445 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 KRT24Q2M2I5 525 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 DNAJC21Q5F1R6 531 aaKnown RBP10.74□□□□□ -0.69
CDH23-203ENST00000398788 TMED8Q6PL24 325 aaPredicted RBP10.74□□□□□ -0.69
CDH23-203ENST00000398788 SRLQ86TD4 932 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 AIDAQ96BJ3 306 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 SHTN1A0MZ66 631 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 FRMD3A2A2Y4 597 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 IFIT1P09914 478 aaKnown RBP10.74□□□□□ -0.69
CDH23-203ENST00000398788 LARP1Q6PKG0 1096 aaKnown RBP10.74□□□□□ -0.69
CDH23-203ENST00000398788 TMC6Q7Z403 805 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 CAGE1Q8TC20 777 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 KCNF1Q9H3M0 494 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 NEO1Q92859 1461 aa10.74□□□□□ -0.69
CDH23-203ENST00000398788 SLC3A2P08195 630 aaKnown RBP10.73□□□□□ -0.69
CDH23-203ENST00000398788 ACTN2P35609 894 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 MAGEA9P43362 315 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 CCT2P78371 535 aaKnown RBP10.73□□□□□ -0.69
CDH23-203ENST00000398788 NAA25Q14CX7 972 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 UBE3BQ7Z3V4 1068 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 C16orf71Q8IYS4 520 aaPredicted RBP10.73□□□□□ -0.69
CDH23-203ENST00000398788 JMYQ8N9B5 988 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 RUFY1Q96T51 708 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 USP26Q9BXU7 913 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 DACT1Q9NYF0 836 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 LIG1P18858 919 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 ARID4AP29374 1257 aaPredicted RBP10.73□□□□□ -0.69
CDH23-203ENST00000398788 MEIS3Q99687 375 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 POLKQ9UBT6 870 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 ANKRD36BQ8N2N9 1353 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 TTC21BQ7Z4L5 1316 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 TXLNAP40222 546 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 FBXO18Q8NFZ0 1043 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 LCMT1Q9UIC8 334 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 CFAP74Q9C0B2 1584 aa10.73□□□□□ -0.69
CDH23-203ENST00000398788 EIF3CLB5ME19 914 aaKnown RBP10.72□□□□□ -0.69
CDH23-203ENST00000398788 GBP2P32456 591 aaPredicted RBP10.72□□□□□ -0.69
CDH23-203ENST00000398788 USP5P45974 858 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 EIF3CQ99613 913 aaKnown RBP10.72□□□□□ -0.69
CDH23-203ENST00000398788 CROCC2H7BZ55 1655 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 TULP2O00295 520 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 ZSCAN22P10073 491 aaPredicted RBP10.72□□□□□ -0.69
CDH23-203ENST00000398788 ZNF75DP51815 510 aa10.72□□□□□ -0.69
CDH23-203ENST00000398788 HAND2P61296 217 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms