RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 RBM17Q96I25 401 aaKnown RBP19.98■□□□□ 0.79
MBD1-207ENST00000398488 KAZALD1Q96I82 304 aa19.98■□□□□ 0.79
MBD1-207ENST00000398488 ATF7IPQ6VMQ6 1270 aa19.97■□□□□ 0.79
MBD1-207ENST00000398488 CELF1Q92879 486 aaKnown RBP19.97■□□□□ 0.79
MBD1-207ENST00000398488 CLUAP1Q96AJ1 413 aa19.97■□□□□ 0.79
MBD1-207ENST00000398488 USP44Q9H0E7 712 aa19.97■□□□□ 0.79
MBD1-207ENST00000398488 ALDH1B1P30837 517 aa19.97■□□□□ 0.79
MBD1-207ENST00000398488 FOXO4P98177 505 aa19.97■□□□□ 0.79
MBD1-207ENST00000398488 TTLL11Q8NHH1 800 aa19.97■□□□□ 0.79
MBD1-207ENST00000398488 PLA2G12BQ9BX93 195 aa19.97■□□□□ 0.79
MBD1-207ENST00000398488 RCAN3Q9UKA8 241 aa19.97■□□□□ 0.79
MBD1-207ENST00000398488 UTYO14607 1347 aa19.96■□□□□ 0.79
MBD1-207ENST00000398488 NFKBIEO00221 500 aa19.96■□□□□ 0.79
MBD1-207ENST00000398488 CTSWP56202 376 aa19.96■□□□□ 0.79
MBD1-207ENST00000398488 RASSF7Q02833 373 aa19.96■□□□□ 0.79
MBD1-207ENST00000398488 SUCLG2Q96I99 432 aa19.96■□□□□ 0.79
MBD1-207ENST00000398488 C9orf78Q9NZ63 289 aaPredicted RBP19.96■□□□□ 0.79
MBD1-207ENST00000398488 SNED1Q8TER0 1413 aa19.95■□□□□ 0.78
MBD1-207ENST00000398488 RLBP1P12271 317 aa19.95■□□□□ 0.78
MBD1-207ENST00000398488 ZKSCAN2Q63HK3 967 aa19.95■□□□□ 0.78
MBD1-207ENST00000398488 DDX46Q7L014 1031 aaKnown RBP19.95■□□□□ 0.78
MBD1-207ENST00000398488 GREM2Q9H772 168 aa19.95■□□□□ 0.78
MBD1-207ENST00000398488 IPO8O15397 1037 aaKnown RBP19.94■□□□□ 0.78
MBD1-207ENST00000398488 CSF1RP07333 972 aa19.94■□□□□ 0.78
MBD1-207ENST00000398488 GRAPQ13588 217 aa19.94■□□□□ 0.78
MBD1-207ENST00000398488 INTS3Q68E01 1043 aaKnown RBP19.94■□□□□ 0.78
MBD1-207ENST00000398488 GRAPLQ8TC17 118 aaPredicted RBP19.94■□□□□ 0.78
MBD1-207ENST00000398488 PPEF1O14829 653 aaPredicted RBP19.93■□□□□ 0.78
MBD1-207ENST00000398488 PLIN1O60240 522 aa19.93■□□□□ 0.78
MBD1-207ENST00000398488 CCT4P50991 539 aaKnown RBP19.93■□□□□ 0.78
MBD1-207ENST00000398488 TMEM57Q8N5G2 664 aa19.92■□□□□ 0.78
MBD1-207ENST00000398488 MYH3P11055 1940 aa19.92■□□□□ 0.78
MBD1-207ENST00000398488 FER1L6Q2WGJ9 1857 aa19.92■□□□□ 0.78
MBD1-207ENST00000398488 FAM161AQ3B820 660 aa19.92■□□□□ 0.78
MBD1-207ENST00000398488 CCDC152Q4G0S7 254 aa19.92■□□□□ 0.78
MBD1-207ENST00000398488 BBOX1O75936 387 aa19.91■□□□□ 0.78
MBD1-207ENST00000398488 LMBR1LQ6UX01 489 aa19.91■□□□□ 0.78
MBD1-207ENST00000398488 ANKRD44Q8N8A2 993 aa19.91■□□□□ 0.78
MBD1-207ENST00000398488 MEIS3Q99687 375 aa19.91■□□□□ 0.78
MBD1-207ENST00000398488 ATP6V0A2Q9Y487 856 aa19.91■□□□□ 0.78
MBD1-207ENST00000398488 HSP90B1P14625 803 aaKnown RBP19.9■□□□□ 0.78
MBD1-207ENST00000398488 RPS8P62241 208 aaKnown RBP19.9■□□□□ 0.78
MBD1-207ENST00000398488 PANK1Q8TE04 598 aa19.9■□□□□ 0.78
MBD1-207ENST00000398488 CCDC93Q567U6 631 aa19.89■□□□□ 0.77
MBD1-207ENST00000398488 BICC1Q9H694 974 aaKnown RBP19.89■□□□□ 0.77
MBD1-207ENST00000398488 RTL9Q8NET4 1388 aa19.89■□□□□ 0.77
MBD1-207ENST00000398488 SP8Q8IXZ3 490 aa19.88■□□□□ 0.77
MBD1-207ENST00000398488 DZIP1LQ8IYY4 767 aaKnown RBP19.88■□□□□ 0.77
MBD1-207ENST00000398488 SBF1O95248 1867 aa19.88■□□□□ 0.77
MBD1-207ENST00000398488 CHD4Q14839 1912 aa19.88■□□□□ 0.77
MBD1-207ENST00000398488 ITGA6P23229 1130 aa19.87■□□□□ 0.77
MBD1-207ENST00000398488 C20orf194Q5TEA3 1177 aa19.87■□□□□ 0.77
MBD1-207ENST00000398488 C9orf131Q5VYM1 1079 aa19.86■□□□□ 0.77
MBD1-207ENST00000398488 ZNF594Q96JF6 807 aaPredicted RBP19.86■□□□□ 0.77
MBD1-207ENST00000398488 RABL6Q3YEC7 729 aaPredicted RBP19.86■□□□□ 0.77
MBD1-207ENST00000398488 ZNF277Q9NRM2 450 aaPredicted RBP19.86■□□□□ 0.77
MBD1-207ENST00000398488 CHMP3Q9Y3E7 222 aa19.86■□□□□ 0.77
MBD1-207ENST00000398488 LRRC37AA6NMS7 1700 aa19.86■□□□□ 0.77
MBD1-207ENST00000398488 SPEF2Q9C093 1822 aa19.85■□□□□ 0.77
MBD1-207ENST00000398488 WTIPA6NIX2 430 aaPredicted RBP19.85■□□□□ 0.77
MBD1-207ENST00000398488 GPSM2P81274 684 aa19.85■□□□□ 0.77
MBD1-207ENST00000398488 FKBP4Q02790 459 aaKnown RBP eCLIP19.85■□□□□ 0.77
MBD1-207ENST00000398488 SOGA3Q5TF21 947 aa19.85■□□□□ 0.77
MBD1-207ENST00000398488 ANKRD18AQ8IVF6 992 aa19.85■□□□□ 0.77
MBD1-207ENST00000398488 RTKN2Q8IZC4 609 aa19.85■□□□□ 0.77
MBD1-207ENST00000398488 TAOK3Q9H2K8 898 aa19.85■□□□□ 0.77
MBD1-207ENST00000398488 LRRFIP2Q9Y608 721 aaKnown RBP19.85■□□□□ 0.77
MBD1-207ENST00000398488 LTBP3Q9NS15 1303 aa19.85■□□□□ 0.77
MBD1-207ENST00000398488 CCDC88AQ3V6T2 1871 aa19.85■□□□□ 0.77
MBD1-207ENST00000398488 DUOX1Q9NRD9 1551 aa19.84■□□□□ 0.77
MBD1-207ENST00000398488 UBTFL1P0CB47 393 aaPredicted RBP19.84■□□□□ 0.77
MBD1-207ENST00000398488 RNF181Q9P0P0 153 aa19.84■□□□□ 0.77
MBD1-207ENST00000398488 COL4A5P29400 1685 aa19.84■□□□□ 0.77
MBD1-207ENST00000398488 CC2D2BQ6DHV5 1058 aa19.83■□□□□ 0.77
MBD1-207ENST00000398488 FTSJ3Q8IY81 847 aaKnown RBP19.83■□□□□ 0.77
MBD1-207ENST00000398488 ANKRD18BA2A2Z9 1011 aa19.82■□□□□ 0.76
MBD1-207ENST00000398488 LMNB1P20700 586 aa19.82■□□□□ 0.76
MBD1-207ENST00000398488 YY1P25490 414 aa19.82■□□□□ 0.76
MBD1-207ENST00000398488 GPR101Q96P66 508 aaPredicted RBP19.82■□□□□ 0.76
MBD1-207ENST00000398488 CDC5LQ99459 802 aaKnown RBP19.82■□□□□ 0.76
MBD1-207ENST00000398488 LTBP1Q14766 1721 aa19.82■□□□□ 0.76
MBD1-207ENST00000398488 ZBTB7BO15156 539 aaPredicted RBP19.81■□□□□ 0.76
MBD1-207ENST00000398488 IFIT5Q13325 482 aaKnown RBP19.81■□□□□ 0.76
MBD1-207ENST00000398488 TMC4Q7Z404 712 aa19.81■□□□□ 0.76
MBD1-207ENST00000398488 ITPRIPQ8IWB1 547 aa19.81■□□□□ 0.76
MBD1-207ENST00000398488 MPNDQ8N594 471 aa19.81■□□□□ 0.76
MBD1-207ENST00000398488 KLHDC4Q8TBB5 520 aa19.81■□□□□ 0.76
MBD1-207ENST00000398488 PSMD1Q99460 953 aa19.81■□□□□ 0.76
MBD1-207ENST00000398488 BSDC1Q9NW68 430 aaPredicted RBP19.81■□□□□ 0.76
MBD1-207ENST00000398488 MINPP1Q9UNW1 487 aa19.81■□□□□ 0.76
MBD1-207ENST00000398488 NSFL1CQ9UNZ2 370 aaKnown RBP19.81■□□□□ 0.76
MBD1-207ENST00000398488 RFX5P48382 616 aaPredicted RBP19.81■□□□□ 0.76
MBD1-207ENST00000398488 DPP8Q6V1X1 898 aaPredicted RBP19.81■□□□□ 0.76
MBD1-207ENST00000398488 RTFDC1Q9BY42 306 aaPredicted RBP19.81■□□□□ 0.76
MBD1-207ENST00000398488 PUS3Q9BZE2 481 aaKnown RBP19.81■□□□□ 0.76
MBD1-207ENST00000398488 POLLQ9UGP5 575 aa19.81■□□□□ 0.76
MBD1-207ENST00000398488 C1orf115Q9H7X2 142 aa19.8■□□□□ 0.76
MBD1-207ENST00000398488 COG6Q9Y2V7 657 aa19.8■□□□□ 0.76
MBD1-207ENST00000398488 GNAI3P08754 354 aa19.79■□□□□ 0.76
MBD1-207ENST00000398488 IGHMBP2P38935 993 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms