RNA–Protein interactions for RNA: ENST00000398486.2

KRT40-202, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-202ENST00000398486 KLHDC4Q8TBB5 520 aa16.17■□□□□ 0.18
KRT40-202ENST00000398486 NYXQ9GZU5 481 aa16.17■□□□□ 0.18
KRT40-202ENST00000398486 PA2G4Q9UQ80 394 aaKnown RBP16.17■□□□□ 0.18
KRT40-202ENST00000398486 PDE8AO60658 829 aa16.16■□□□□ 0.18
KRT40-202ENST00000398486 PRR5LQ6MZQ0 368 aa16.16■□□□□ 0.18
KRT40-202ENST00000398486 NLGN1Q8N2Q7 840 aa16.16■□□□□ 0.18
KRT40-202ENST00000398486 EXOC6BQ9Y2D4 811 aa16.16■□□□□ 0.18
KRT40-202ENST00000398486 COL11A2P13942 1736 aaPredicted RBP16.16■□□□□ 0.18
KRT40-202ENST00000398486 CCDC85AQ96PX6 553 aaPredicted RBP16.15■□□□□ 0.18
KRT40-202ENST00000398486 A0A1B0GUL6 1792 aa16.15■□□□□ 0.18
KRT40-202ENST00000398486 SERPINB2P05120 415 aa16.15■□□□□ 0.18
KRT40-202ENST00000398486 MMP10P09238 476 aa16.15■□□□□ 0.18
KRT40-202ENST00000398486 PTPN12Q05209 780 aaKnown RBP16.15■□□□□ 0.18
KRT40-202ENST00000398486 SLC10A5Q5PT55 438 aa16.15■□□□□ 0.18
KRT40-202ENST00000398486 CNBD1Q8NA66 436 aa16.15■□□□□ 0.18
KRT40-202ENST00000398486 GCC1Q96CN9 775 aa16.15■□□□□ 0.18
KRT40-202ENST00000398486 GREM2Q9H772 168 aa16.15■□□□□ 0.18
KRT40-202ENST00000398486 TPTE2Q6XPS3 522 aa16.14■□□□□ 0.17
KRT40-202ENST00000398486 PDZRN3Q9UPQ7 1066 aa16.13■□□□□ 0.17
KRT40-202ENST00000398486 NOP58Q9Y2X3 529 aaKnown RBP16.13■□□□□ 0.17
KRT40-202ENST00000398486 CHMP3Q9Y3E7 222 aa16.13■□□□□ 0.17
KRT40-202ENST00000398486 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
KRT40-202ENST00000398486 NUCB1Q02818 461 aa16.13■□□□□ 0.17
KRT40-202ENST00000398486 COPRSQ9NQ92 184 aa16.13■□□□□ 0.17
KRT40-202ENST00000398486 R3HDM1Q15032 1099 aaKnown RBP16.12■□□□□ 0.17
KRT40-202ENST00000398486 ZNF594Q96JF6 807 aaPredicted RBP16.12■□□□□ 0.17
KRT40-202ENST00000398486 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.12■□□□□ 0.17
KRT40-202ENST00000398486 APBB1O00213 710 aa16.11■□□□□ 0.17
KRT40-202ENST00000398486 SURF6O75683 361 aaKnown RBP16.11■□□□□ 0.17
KRT40-202ENST00000398486 ITGA6P23229 1130 aa16.11■□□□□ 0.17
KRT40-202ENST00000398486 GTF2E1P29083 439 aaPredicted RBP16.11■□□□□ 0.17
KRT40-202ENST00000398486 SIL1Q9H173 461 aa16.11■□□□□ 0.17
KRT40-202ENST00000398486 SMARCA5O60264 1052 aaPredicted RBP16.1■□□□□ 0.17
KRT40-202ENST00000398486 SF3B3Q15393 1217 aaKnown RBP16.1■□□□□ 0.17
KRT40-202ENST00000398486 SEC31BQ9NQW1 1179 aa16.1■□□□□ 0.17
KRT40-202ENST00000398486 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
KRT40-202ENST00000398486 PDE4AP27815 886 aa16.1■□□□□ 0.17
KRT40-202ENST00000398486 LNPKQ9C0E8 428 aa16.1■□□□□ 0.17
KRT40-202ENST00000398486 HSP90B1P14625 803 aaKnown RBP16.09■□□□□ 0.17
KRT40-202ENST00000398486 IFIT5Q13325 482 aaKnown RBP16.09■□□□□ 0.17
KRT40-202ENST00000398486 CCDC57Q2TAC2 916 aa16.09■□□□□ 0.17
KRT40-202ENST00000398486 CCDC152Q4G0S7 254 aa16.09■□□□□ 0.17
KRT40-202ENST00000398486 ANKRD45Q5TZF3 282 aa16.09■□□□□ 0.17
KRT40-202ENST00000398486 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
KRT40-202ENST00000398486 CHD1LQ86WJ1 897 aa16.09■□□□□ 0.17
KRT40-202ENST00000398486 SLC16A10Q8TF71 515 aa16.09■□□□□ 0.17
KRT40-202ENST00000398486 PUS3Q9BZE2 481 aaKnown RBP16.09■□□□□ 0.17
KRT40-202ENST00000398486 CACNA1SQ13698 1873 aa16.08■□□□□ 0.17
KRT40-202ENST00000398486 PSDA5PKW4 1024 aaPredicted RBP16.08■□□□□ 0.17
KRT40-202ENST00000398486 NPHP1O15259 732 aa16.08■□□□□ 0.17
KRT40-202ENST00000398486 SASH1O94885 1247 aa16.08■□□□□ 0.17
KRT40-202ENST00000398486 ST5P78524 1137 aa16.08■□□□□ 0.17
KRT40-202ENST00000398486 LRRC24Q50LG9 513 aa16.08■□□□□ 0.17
KRT40-202ENST00000398486 PARP3Q9Y6F1 533 aa16.08■□□□□ 0.17
KRT40-202ENST00000398486 KIAA1551Q9HCM1 1747 aa16.08■□□□□ 0.16
KRT40-202ENST00000398486 CRY2Q49AN0 593 aa16.08■□□□□ 0.16
KRT40-202ENST00000398486 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
KRT40-202ENST00000398486 C10orf71Q711Q0 1435 aa16.07■□□□□ 0.16
KRT40-202ENST00000398486 DLEC1Q9Y238 1755 aa16.07■□□□□ 0.16
KRT40-202ENST00000398486 ANKRD18BA2A2Z9 1011 aa16.07■□□□□ 0.16
KRT40-202ENST00000398486 ZBTB7AO95365 584 aa16.07■□□□□ 0.16
KRT40-202ENST00000398486 RHPN1Q8TCX5 695 aa16.07■□□□□ 0.16
KRT40-202ENST00000398486 LRRCC1Q9C099 1032 aa16.07■□□□□ 0.16
KRT40-202ENST00000398486 KLRG2A4D1S0 409 aaPredicted RBP16.06■□□□□ 0.16
KRT40-202ENST00000398486 EYA2O00167 538 aa16.06■□□□□ 0.16
KRT40-202ENST00000398486 RAB11FIP3O75154 756 aa16.06■□□□□ 0.16
KRT40-202ENST00000398486 OTUD7AQ8TE49 926 aaPredicted RBP16.06■□□□□ 0.16
KRT40-202ENST00000398486 IL1RAPL2Q9NP60 686 aa16.06■□□□□ 0.16
KRT40-202ENST00000398486 LRRC37AA6NMS7 1700 aa16.06■□□□□ 0.16
KRT40-202ENST00000398486 KIF1BPQ96EK5 621 aa16.05■□□□□ 0.16
KRT40-202ENST00000398486 ARAP2Q8WZ64 1704 aa16.05■□□□□ 0.16
KRT40-202ENST00000398486 SALL3Q9BXA9 1300 aa16.05■□□□□ 0.16
KRT40-202ENST00000398486 CIAO1O76071 339 aa16.05■□□□□ 0.16
KRT40-202ENST00000398486 G3BP1Q13283 466 aaKnown RBP eCLIP16.05■□□□□ 0.16
KRT40-202ENST00000398486 OS9Q13438 667 aaPredicted RBP16.05■□□□□ 0.16
KRT40-202ENST00000398486 HSP90AB4PQ58FF6 505 aa16.05■□□□□ 0.16
KRT40-202ENST00000398486 SLC51AQ86UW1 340 aa16.05■□□□□ 0.16
KRT40-202ENST00000398486 C16orf71Q8IYS4 520 aaPredicted RBP16.05■□□□□ 0.16
KRT40-202ENST00000398486 CELF1Q92879 486 aaKnown RBP16.05■□□□□ 0.16
KRT40-202ENST00000398486 BRIP1Q9BX63 1249 aa16.05■□□□□ 0.16
KRT40-202ENST00000398486 RIPOR2Q9Y4F9 1068 aa16.05■□□□□ 0.16
KRT40-202ENST00000398486 UTRNP46939 3433 aa16.05■□□□□ 0.16
KRT40-202ENST00000398486 RGS3P49796 1198 aa16.04■□□□□ 0.16
KRT40-202ENST00000398486 TAF7LQ5H9L4 462 aa16.04■□□□□ 0.16
KRT40-202ENST00000398486 SGIP1Q9BQI5 828 aa16.04■□□□□ 0.16
KRT40-202ENST00000398486 MTFR1LQ9H019 292 aa16.04■□□□□ 0.16
KRT40-202ENST00000398486 ZNF609O15014 1411 aa16.04■□□□□ 0.16
KRT40-202ENST00000398486 TFCP2Q12800 502 aa16.03■□□□□ 0.16
KRT40-202ENST00000398486 ERC1Q8IUD2 1116 aa16.03■□□□□ 0.16
KRT40-202ENST00000398486 VGLL2Q8N8G2 317 aa16.03■□□□□ 0.16
KRT40-202ENST00000398486 LTBP1Q14766 1721 aa16.03■□□□□ 0.16
KRT40-202ENST00000398486 IL15P40933 162 aaPredicted RBP16.03■□□□□ 0.16
KRT40-202ENST00000398486 LDHAL6AQ6ZMR3 332 aa16.03■□□□□ 0.16
KRT40-202ENST00000398486 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
KRT40-202ENST00000398486 FBXO3Q9UK99 471 aa16.03■□□□□ 0.16
KRT40-202ENST00000398486 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
KRT40-202ENST00000398486 CDC5LQ99459 802 aaKnown RBP16.02■□□□□ 0.15
KRT40-202ENST00000398486 BRCA1P38398 1863 aaKnown RBP16.01■□□□□ 0.15
KRT40-202ENST00000398486 HOXA10P31260 410 aaPredicted RBP16.01■□□□□ 0.15
KRT40-202ENST00000398486 EAF2Q96CJ1 260 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms