RNA–Protein interactions for RNA: ENST00000398453.7

SMAGP-202, Transcript of small cell adhesion glycoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAGP, Length 1,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-202ENST00000398453 CSF1RP07333 972 aa20.28■□□□□ 0.84
SMAGP-202ENST00000398453 RFX5P48382 616 aaPredicted RBP20.28■□□□□ 0.84
SMAGP-202ENST00000398453 PRR5LQ6MZQ0 368 aa20.28■□□□□ 0.84
SMAGP-202ENST00000398453 TTLL11Q8NHH1 800 aa20.28■□□□□ 0.84
SMAGP-202ENST00000398453 APBB1O00213 710 aa20.27■□□□□ 0.84
SMAGP-202ENST00000398453 SURF6O75683 361 aaKnown RBP20.27■□□□□ 0.84
SMAGP-202ENST00000398453 ST5P78524 1137 aa20.27■□□□□ 0.84
SMAGP-202ENST00000398453 SLC10A5Q5PT55 438 aa20.27■□□□□ 0.84
SMAGP-202ENST00000398453 KLHDC4Q8TBB5 520 aa20.27■□□□□ 0.84
SMAGP-202ENST00000398453 PARP3Q9Y6F1 533 aa20.27■□□□□ 0.84
SMAGP-202ENST00000398453 R3HDM1Q15032 1099 aaKnown RBP20.26■□□□□ 0.83
SMAGP-202ENST00000398453 CCDC57Q2TAC2 916 aa20.26■□□□□ 0.83
SMAGP-202ENST00000398453 C3orf67Q6ZVT6 689 aa20.26■□□□□ 0.83
SMAGP-202ENST00000398453 GREM2Q9H772 168 aa20.26■□□□□ 0.83
SMAGP-202ENST00000398453 PDZRN3Q9UPQ7 1066 aa20.26■□□□□ 0.83
SMAGP-202ENST00000398453 RIC1Q4ADV7 1423 aa20.26■□□□□ 0.83
SMAGP-202ENST00000398453 SPEF2Q9C093 1822 aa20.25■□□□□ 0.83
SMAGP-202ENST00000398453 IFIT5Q13325 482 aaKnown RBP20.25■□□□□ 0.83
SMAGP-202ENST00000398453 OS9Q13438 667 aaPredicted RBP20.25■□□□□ 0.83
SMAGP-202ENST00000398453 CCDC152Q4G0S7 254 aa20.25■□□□□ 0.83
SMAGP-202ENST00000398453 SIL1Q9H173 461 aa20.25■□□□□ 0.83
SMAGP-202ENST00000398453 ANKRD31Q8N7Z5 1873 aa20.24■□□□□ 0.83
SMAGP-202ENST00000398453 ANKRD18BA2A2Z9 1011 aa20.24■□□□□ 0.83
SMAGP-202ENST00000398453 ITGA6P23229 1130 aa20.24■□□□□ 0.83
SMAGP-202ENST00000398453 PTPN12Q05209 780 aaKnown RBP20.24■□□□□ 0.83
SMAGP-202ENST00000398453 TAF7LQ5H9L4 462 aa20.24■□□□□ 0.83
SMAGP-202ENST00000398453 ANKRD45Q5TZF3 282 aa20.24■□□□□ 0.83
SMAGP-202ENST00000398453 SKAP1Q86WV1 359 aa20.24■□□□□ 0.83
SMAGP-202ENST00000398453 SLC16A10Q8TF71 515 aa20.24■□□□□ 0.83
SMAGP-202ENST00000398453 NLRP3Q96P20 1036 aa20.24■□□□□ 0.83
SMAGP-202ENST00000398453 COPRSQ9NQ92 184 aa20.24■□□□□ 0.83
SMAGP-202ENST00000398453 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
SMAGP-202ENST00000398453 LRP5O75197 1615 aa20.24■□□□□ 0.83
SMAGP-202ENST00000398453 RTL9Q8NET4 1388 aa20.23■□□□□ 0.83
SMAGP-202ENST00000398453 NUCB1Q02818 461 aa20.23■□□□□ 0.83
SMAGP-202ENST00000398453 HSP90AB4PQ58FF6 505 aa20.23■□□□□ 0.83
SMAGP-202ENST00000398453 ZNF594Q96JF6 807 aaPredicted RBP20.23■□□□□ 0.83
SMAGP-202ENST00000398453 ZBTB47Q9UFB7 747 aaPredicted RBP20.23■□□□□ 0.83
SMAGP-202ENST00000398453 SMARCA5O60264 1052 aaPredicted RBP20.22■□□□□ 0.83
SMAGP-202ENST00000398453 RAB11FIP3O75154 756 aa20.22■□□□□ 0.83
SMAGP-202ENST00000398453 G3BP1Q13283 466 aaKnown RBP eCLIP20.22■□□□□ 0.83
SMAGP-202ENST00000398453 SF3B3Q15393 1217 aaKnown RBP20.22■□□□□ 0.83
SMAGP-202ENST00000398453 LNPKQ9C0E8 428 aa20.22■□□□□ 0.83
SMAGP-202ENST00000398453 BCL11AQ9H165 835 aa20.22■□□□□ 0.83
SMAGP-202ENST00000398453 PSDA5PKW4 1024 aaPredicted RBP20.21■□□□□ 0.83
SMAGP-202ENST00000398453 CHD1LQ86WJ1 897 aa20.21■□□□□ 0.83
SMAGP-202ENST00000398453 LRRCC1Q9C099 1032 aa20.21■□□□□ 0.83
SMAGP-202ENST00000398453 SEC31BQ9NQW1 1179 aa20.21■□□□□ 0.83
SMAGP-202ENST00000398453 TAF1P21675 1872 aa20.2■□□□□ 0.82
SMAGP-202ENST00000398453 COL4A1P02462 1669 aa20.2■□□□□ 0.82
SMAGP-202ENST00000398453 ZBTB7AO95365 584 aa20.2■□□□□ 0.82
SMAGP-202ENST00000398453 ERC1Q8IUD2 1116 aa20.2■□□□□ 0.82
SMAGP-202ENST00000398453 RHPN1Q8TCX5 695 aa20.19■□□□□ 0.82
SMAGP-202ENST00000398453 KIF1BPQ96EK5 621 aa20.19■□□□□ 0.82
SMAGP-202ENST00000398453 COL11A2P13942 1736 aaPredicted RBP20.19■□□□□ 0.82
SMAGP-202ENST00000398453 EYA2O00167 538 aa20.18■□□□□ 0.82
SMAGP-202ENST00000398453 LRRC24Q50LG9 513 aa20.18■□□□□ 0.82
SMAGP-202ENST00000398453 PUS3Q9BZE2 481 aaKnown RBP20.18■□□□□ 0.82
SMAGP-202ENST00000398453 CIAO1O76071 339 aa20.17■□□□□ 0.82
SMAGP-202ENST00000398453 PDE4AP27815 886 aa20.17■□□□□ 0.82
SMAGP-202ENST00000398453 RGS3P49796 1198 aa20.17■□□□□ 0.82
SMAGP-202ENST00000398453 CDC5LQ99459 802 aaKnown RBP20.17■□□□□ 0.82
SMAGP-202ENST00000398453 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
SMAGP-202ENST00000398453 IL1RAPL2Q9NP60 686 aa20.17■□□□□ 0.82
SMAGP-202ENST00000398453 SASH1O94885 1247 aa20.16■□□□□ 0.82
SMAGP-202ENST00000398453 IGHMBP2P38935 993 aaKnown RBP20.16■□□□□ 0.82
SMAGP-202ENST00000398453 DDX46Q7L014 1031 aaKnown RBP20.16■□□□□ 0.82
SMAGP-202ENST00000398453 ATG9AQ7Z3C6 839 aa20.16■□□□□ 0.82
SMAGP-202ENST00000398453 RPGRQ92834 1020 aaKnown RBP20.16■□□□□ 0.82
SMAGP-202ENST00000398453 BRIP1Q9BX63 1249 aa20.16■□□□□ 0.82
SMAGP-202ENST00000398453 CNNM1Q9NRU3 951 aa20.16■□□□□ 0.82
SMAGP-202ENST00000398453 ATF5Q9Y2D1 282 aaPredicted RBP20.16■□□□□ 0.82
SMAGP-202ENST00000398453 IL15P40933 162 aaPredicted RBP20.15■□□□□ 0.82
SMAGP-202ENST00000398453 LDHAL6AQ6ZMR3 332 aa20.15■□□□□ 0.82
SMAGP-202ENST00000398453 ANKRD18AQ8IVF6 992 aa20.15■□□□□ 0.82
SMAGP-202ENST00000398453 MPHOSPH8Q99549 860 aa20.15■□□□□ 0.82
SMAGP-202ENST00000398453 FBXO3Q9UK99 471 aa20.15■□□□□ 0.82
SMAGP-202ENST00000398453 A0A1B0GUL6 1792 aa20.14■□□□□ 0.81
SMAGP-202ENST00000398453 C10orf71Q711Q0 1435 aa20.14■□□□□ 0.81
SMAGP-202ENST00000398453 TFCP2Q12800 502 aa20.14■□□□□ 0.81
SMAGP-202ENST00000398453 CRY2Q49AN0 593 aa20.14■□□□□ 0.81
SMAGP-202ENST00000398453 POLD1P28340 1107 aa20.13■□□□□ 0.81
SMAGP-202ENST00000398453 PDE6BP35913 854 aa20.13■□□□□ 0.81
SMAGP-202ENST00000398453 CELF1Q92879 486 aaKnown RBP20.13■□□□□ 0.81
SMAGP-202ENST00000398453 RBM17Q96I25 401 aaKnown RBP20.13■□□□□ 0.81
SMAGP-202ENST00000398453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.13■□□□□ 0.81
SMAGP-202ENST00000398453 KLRG2A4D1S0 409 aaPredicted RBP20.12■□□□□ 0.81
SMAGP-202ENST00000398453 METTL24Q5JXM2 366 aa20.12■□□□□ 0.81
SMAGP-202ENST00000398453 C16orf71Q8IYS4 520 aaPredicted RBP20.12■□□□□ 0.81
SMAGP-202ENST00000398453 CLASRPQ8N2M8 674 aaKnown RBP20.12■□□□□ 0.81
SMAGP-202ENST00000398453 OTUD7AQ8TE49 926 aaPredicted RBP20.12■□□□□ 0.81
SMAGP-202ENST00000398453 RIPOR2Q9Y4F9 1068 aa20.12■□□□□ 0.81
SMAGP-202ENST00000398453 ZNF609O15014 1411 aa20.11■□□□□ 0.81
SMAGP-202ENST00000398453 GRAPQ13588 217 aa20.11■□□□□ 0.81
SMAGP-202ENST00000398453 GRAPLQ8TC17 118 aaPredicted RBP20.11■□□□□ 0.81
SMAGP-202ENST00000398453 CEP126Q9P2H0 1117 aa20.11■□□□□ 0.81
SMAGP-202ENST00000398453 CACNA1SQ13698 1873 aa20.11■□□□□ 0.81
SMAGP-202ENST00000398453 RPS8P62241 208 aaKnown RBP20.1■□□□□ 0.81
SMAGP-202ENST00000398453 AACSQ86V21 672 aa20.1■□□□□ 0.81
SMAGP-202ENST00000398453 KIF13BQ9NQT8 1826 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms