RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 SAP30BPQ9UHR5 308 aaKnown RBP12.88□□□□□ -0.35
RGPD2-201ENST00000398146 F6X3S4 739 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 APBA3O96018 575 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 PPP2R5DQ14738 602 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 IFNL2Q8IZJ0 200 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 GAS8O95995 478 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 XRCC6P12956 609 aaKnown RBP eCLIP12.88□□□□□ -0.35
RGPD2-201ENST00000398146 MAP7D1Q3KQU3 841 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 IFIT1BQ5T764 474 aaKnown RBP12.88□□□□□ -0.35
RGPD2-201ENST00000398146 PPP4R4Q6NUP7 873 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 GSDMBQ8TAX9 411 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 ANKRD24Q8TF21 1146 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
RGPD2-201ENST00000398146 GOLGA1Q92805 767 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 RSPH6AQ9H0K4 717 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
RGPD2-201ENST00000398146 NAPAP54920 295 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 EYA3Q99504 573 aa12.88□□□□□ -0.35
RGPD2-201ENST00000398146 LARGE2Q8N3Y3 721 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 ZGPATQ8N5A5 531 aaKnown RBP12.87□□□□□ -0.35
RGPD2-201ENST00000398146 FAM169AQ9Y6X4 670 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 ERBINQ96RT1 1412 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 KIF4BQ2VIQ3 1234 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 KIF1BPQ96EK5 621 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 BIN1O00499 593 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 TRAPPC3LQ5T215 181 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 KIF5CO60282 957 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 PAFAH1B1P43034 410 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 CDCA7LQ96GN5 454 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 MAK16Q9BXY0 300 aaKnown RBP12.87□□□□□ -0.35
RGPD2-201ENST00000398146 NYXQ9GZU5 481 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 YEATS4O95619 227 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 MYCLP12524 364 aaPredicted RBP12.87□□□□□ -0.35
RGPD2-201ENST00000398146 NBPF3Q9H094 633 aa12.87□□□□□ -0.35
RGPD2-201ENST00000398146 PTPDC1A2A3K4 754 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 DAPK3O43293 454 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 TRAK2O60296 914 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 SORBS3O60504 671 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 MAATS1Q7Z4T9 603 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 SATB1Q01826 763 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
RGPD2-201ENST00000398146 UBE3BQ7Z3V4 1068 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
RGPD2-201ENST00000398146 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 TXNDC16Q9P2K2 825 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 ERICH4A6NGS2 130 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
RGPD2-201ENST00000398146 CHMP2AO43633 222 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 BAG6P46379 1132 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 CFAP57Q96MR6 1250 aa12.86□□□□□ -0.35
RGPD2-201ENST00000398146 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 PAGR1Q9BTK6 254 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 SPC25Q9HBM1 224 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 SLC52A1Q9NWF4 448 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 HYPKQ9NX55 129 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 ABT1Q9ULW3 272 aaKnown RBP12.85□□□□□ -0.35
RGPD2-201ENST00000398146 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 PPP1R21Q6ZMI0 780 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 NME9Q86XW9 330 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 TTLL3Q9Y4R7 772 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 KRT9P35527 623 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 IFRD2Q12894 506 aaPredicted RBP12.85□□□□□ -0.35
RGPD2-201ENST00000398146 KIFC2Q96AC6 838 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 CACYBPQ9HB71 228 aaKnown RBP12.85□□□□□ -0.35
RGPD2-201ENST00000398146 TOP1P11387 765 aaKnown RBP12.85□□□□□ -0.35
RGPD2-201ENST00000398146 METAP2P50579 478 aaKnown RBP eCLIP12.85□□□□□ -0.35
RGPD2-201ENST00000398146 SLC8A3P57103 927 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 KIAA0753Q2KHM9 967 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 MYOM3Q5VTT5 1437 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 TPTE2Q6XPS3 522 aa12.85□□□□□ -0.35
RGPD2-201ENST00000398146 KRT5P13647 590 aa12.84□□□□□ -0.35
RGPD2-201ENST00000398146 SMARCC1Q92922 1105 aaPredicted RBP12.84□□□□□ -0.35
RGPD2-201ENST00000398146 CCDC114Q96M63 670 aa12.84□□□□□ -0.35
RGPD2-201ENST00000398146 DDX39AO00148 427 aaKnown RBP12.84□□□□□ -0.35
RGPD2-201ENST00000398146 IARSP41252 1262 aaKnown RBP12.84□□□□□ -0.35
RGPD2-201ENST00000398146 CHD1LQ86WJ1 897 aa12.84□□□□□ -0.35
RGPD2-201ENST00000398146 TTC30BQ8N4P2 665 aa12.84□□□□□ -0.35
RGPD2-201ENST00000398146 CCDC14Q49A88 953 aa12.84□□□□□ -0.35
RGPD2-201ENST00000398146 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
RGPD2-201ENST00000398146 SBNO2Q9Y2G9 1366 aa12.84□□□□□ -0.35
RGPD2-201ENST00000398146 NBPF1Q3BBV0 1214 aa12.83□□□□□ -0.35
RGPD2-201ENST00000398146 USP16Q9Y5T5 823 aa12.83□□□□□ -0.35
RGPD2-201ENST00000398146 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
RGPD2-201ENST00000398146 IRX3P78415 501 aaPredicted RBP12.83□□□□□ -0.36
RGPD2-201ENST00000398146 DZIP3Q86Y13 1208 aaKnown RBP12.83□□□□□ -0.36
RGPD2-201ENST00000398146 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
RGPD2-201ENST00000398146 H0YIN7 160 aa12.83□□□□□ -0.36
RGPD2-201ENST00000398146 AFMP43652 599 aa12.83□□□□□ -0.36
RGPD2-201ENST00000398146 ZBED9Q6R2W3 1325 aa12.83□□□□□ -0.36
RGPD2-201ENST00000398146 SHTN1A0MZ66 631 aa12.83□□□□□ -0.36
RGPD2-201ENST00000398146 DNAAF4Q8WXU2 420 aa12.83□□□□□ -0.36
RGPD2-201ENST00000398146 PPP1R9BQ96SB3 815 aa12.83□□□□□ -0.36
RGPD2-201ENST00000398146 AFG3L2Q9Y4W6 797 aa12.83□□□□□ -0.36
RGPD2-201ENST00000398146 ZBTB16Q05516 673 aa12.83□□□□□ -0.36
RGPD2-201ENST00000398146 CGNQ9P2M7 1197 aaKnown RBP12.83□□□□□ -0.36
RGPD2-201ENST00000398146 WTAPQ15007 396 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms