RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 RNF181Q9P0P0 153 aa32.09■■■□□ 2.73
TSPAN4-207ENST00000397411 KIF16BQ96L93 1317 aa32.08■■■□□ 2.73
TSPAN4-207ENST00000397411 IPO8O15397 1037 aaKnown RBP32.08■■■□□ 2.73
TSPAN4-207ENST00000397411 OLFM4Q6UX06 510 aa32.08■■■□□ 2.73
TSPAN4-207ENST00000397411 TAOK3Q9H2K8 898 aa32.08■■■□□ 2.73
TSPAN4-207ENST00000397411 GOLGB1Q14789 3259 aaKnown RBP32.07■■■□□ 2.72
TSPAN4-207ENST00000397411 LMNB1P20700 586 aa32.07■■■□□ 2.72
TSPAN4-207ENST00000397411 NFKBIEO00221 500 aa32.06■■■□□ 2.72
TSPAN4-207ENST00000397411 GRM8O00222 908 aa32.06■■■□□ 2.72
TSPAN4-207ENST00000397411 CTSWP56202 376 aa32.06■■■□□ 2.72
TSPAN4-207ENST00000397411 FRAT1Q92837 279 aaPredicted RBP32.06■■■□□ 2.72
TSPAN4-207ENST00000397411 BCAR3O75815 825 aa32.05■■■□□ 2.72
TSPAN4-207ENST00000397411 GRIPAP1Q4V328 841 aa32.05■■■□□ 2.72
TSPAN4-207ENST00000397411 ATP6V0A2Q9Y487 856 aa32.05■■■□□ 2.72
TSPAN4-207ENST00000397411 TAF1P21675 1872 aa32.04■■■□□ 2.72
TSPAN4-207ENST00000397411 TMC4Q7Z404 712 aa32.04■■■□□ 2.72
TSPAN4-207ENST00000397411 SP8Q8IXZ3 490 aa32.04■■■□□ 2.72
TSPAN4-207ENST00000397411 YTHDC1Q96MU7 727 aaKnown RBP32.04■■■□□ 2.72
TSPAN4-207ENST00000397411 FER1L6Q2WGJ9 1857 aa32.03■■■□□ 2.72
TSPAN4-207ENST00000397411 CCDC88AQ3V6T2 1871 aa32.03■■■□□ 2.72
TSPAN4-207ENST00000397411 RPS8P62241 208 aaKnown RBP32.03■■■□□ 2.72
TSPAN4-207ENST00000397411 FKBP4Q02790 459 aaKnown RBP eCLIP32.03■■■□□ 2.721e-6■■■■□ 24.5
TSPAN4-207ENST00000397411 SBF1O95248 1867 aa32.03■■■□□ 2.72
TSPAN4-207ENST00000397411 CASP7P55210 303 aa32.02■■■□□ 2.72
TSPAN4-207ENST00000397411 TTLL11Q8NHH1 800 aa32.02■■■□□ 2.72
TSPAN4-207ENST00000397411 ARHGAP45Q92619 1136 aa32.02■■■□□ 2.72
TSPAN4-207ENST00000397411 CELF1Q92879 486 aaKnown RBP32.02■■■□□ 2.72
TSPAN4-207ENST00000397411 SEC31BQ9NQW1 1179 aa32.02■■■□□ 2.72
TSPAN4-207ENST00000397411 MYH3P11055 1940 aa32.02■■■□□ 2.72
TSPAN4-207ENST00000397411 LTBP3Q9NS15 1303 aa32.01■■■□□ 2.72
TSPAN4-207ENST00000397411 CCT4P50991 539 aaKnown RBP32.01■■■□□ 2.71
TSPAN4-207ENST00000397411 PLA2G12BQ9BX93 195 aa32.01■■■□□ 2.71
TSPAN4-207ENST00000397411 CHMP3Q9Y3E7 222 aa32■■■□□ 2.71
TSPAN4-207ENST00000397411 UTRNP46939 3433 aa32■■■□□ 2.71
TSPAN4-207ENST00000397411 ANKRD18AQ8IVF6 992 aa31.99■■■□□ 2.71
TSPAN4-207ENST00000397411 CDC5LQ99459 802 aaKnown RBP31.99■■■□□ 2.71
TSPAN4-207ENST00000397411 MPNDQ8N594 471 aa31.98■■■□□ 2.71
TSPAN4-207ENST00000397411 GREM2Q9H772 168 aa31.98■■■□□ 2.71
TSPAN4-207ENST00000397411 ZNF277Q9NRM2 450 aaPredicted RBP31.98■■■□□ 2.71
TSPAN4-207ENST00000397411 PRELPP51888 382 aa31.96■■■□□ 2.71
TSPAN4-207ENST00000397411 DPP8Q6V1X1 898 aaPredicted RBP31.96■■■□□ 2.71
TSPAN4-207ENST00000397411 ZNF784Q8NCA9 323 aaPredicted RBP31.96■■■□□ 2.71
TSPAN4-207ENST00000397411 ZNF526Q8TF50 670 aaPredicted RBP31.96■■■□□ 2.71
TSPAN4-207ENST00000397411 PSMD1Q99460 953 aa31.96■■■□□ 2.71
TSPAN4-207ENST00000397411 ZKSCAN2Q63HK3 967 aa31.95■■■□□ 2.71
TSPAN4-207ENST00000397411 ATF7IPQ6VMQ6 1270 aa31.95■■■□□ 2.71
TSPAN4-207ENST00000397411 CSF1RP07333 972 aa31.94■■■□□ 2.7
TSPAN4-207ENST00000397411 NBPF7P0C2Y1 421 aaPredicted RBP31.94■■■□□ 2.7
TSPAN4-207ENST00000397411 SUPT20HQ8NEM7 779 aa31.94■■■□□ 2.7
TSPAN4-207ENST00000397411 ITGA6P23229 1130 aa31.93■■■□□ 2.7
TSPAN4-207ENST00000397411 FOXO4P98177 505 aa31.93■■■□□ 2.7
TSPAN4-207ENST00000397411 LMBR1LQ6UX01 489 aa31.93■■■□□ 2.7
TSPAN4-207ENST00000397411 SLC51AQ86UW1 340 aa31.93■■■□□ 2.7
TSPAN4-207ENST00000397411 NSFL1CQ9UNZ2 370 aaKnown RBP31.93■■■□□ 2.7
TSPAN4-207ENST00000397411 ANKRD18BA2A2Z9 1011 aa31.92■■■□□ 2.7
TSPAN4-207ENST00000397411 IGHMBP2P38935 993 aaKnown RBP31.92■■■□□ 2.7
TSPAN4-207ENST00000397411 IARSP41252 1262 aaKnown RBP31.92■■■□□ 2.7
TSPAN4-207ENST00000397411 USP44Q9H0E7 712 aa31.92■■■□□ 2.7
TSPAN4-207ENST00000397411 IFIT5Q13325 482 aaKnown RBP31.91■■■□□ 2.7
TSPAN4-207ENST00000397411 FAM161AQ3B820 660 aa31.91■■■□□ 2.7
TSPAN4-207ENST00000397411 CLUAP1Q96AJ1 413 aa31.91■■■□□ 2.7
TSPAN4-207ENST00000397411 SUCLG2Q96I99 432 aa31.91■■■□□ 2.7
TSPAN4-207ENST00000397411 UTYO14607 1347 aa31.91■■■□□ 2.7
TSPAN4-207ENST00000397411 RTL9Q8NET4 1388 aa31.91■■■□□ 2.7
TSPAN4-207ENST00000397411 TRIM27P14373 513 aa31.9■■■□□ 2.7
TSPAN4-207ENST00000397411 DICER1Q9UPY3 1922 aaKnown RBP31.89■■■□□ 2.7
TSPAN4-207ENST00000397411 CCDC57Q2TAC2 916 aa31.89■■■□□ 2.7
TSPAN4-207ENST00000397411 TAF7LQ5H9L4 462 aa31.89■■■□□ 2.7
TSPAN4-207ENST00000397411 EPHA10Q5JZY3 1008 aa31.89■■■□□ 2.7
TSPAN4-207ENST00000397411 LARGE2Q8N3Y3 721 aa31.89■■■□□ 2.7
TSPAN4-207ENST00000397411 JDP2Q8WYK2 163 aa31.89■■■□□ 2.7
TSPAN4-207ENST00000397411 MPHOSPH8Q99549 860 aa31.89■■■□□ 2.7
TSPAN4-207ENST00000397411 GPBP1L1Q9HC44 474 aaPredicted RBP31.89■■■□□ 2.7
TSPAN4-207ENST00000397411 ANKIB1Q9P2G1 1089 aa31.89■■■□□ 2.7
TSPAN4-207ENST00000397411 HDAC5Q9UQL6 1122 aa31.89■■■□□ 2.7
TSPAN4-207ENST00000397411 ZC3H4Q9UPT8 1303 aaKnown RBP31.88■■■□□ 2.69
TSPAN4-207ENST00000397411 C6orf229H3BNL8 230 aa31.87■■■□□ 2.69
TSPAN4-207ENST00000397411 UBTFL1P0CB47 393 aaPredicted RBP31.87■■■□□ 2.69
TSPAN4-207ENST00000397411 GPSM2P81274 684 aa31.87■■■□□ 2.69
TSPAN4-207ENST00000397411 INTS3Q68E01 1043 aaKnown RBP31.87■■■□□ 2.69
TSPAN4-207ENST00000397411 DPY19L2Q6NUT2 758 aa31.87■■■□□ 2.69
TSPAN4-207ENST00000397411 RCAN3Q9UKA8 241 aa31.87■■■□□ 2.69
TSPAN4-207ENST00000397411 PPIP5K2O43314 1243 aa31.86■■■□□ 2.69
TSPAN4-207ENST00000397411 FTSJ3Q8IY81 847 aaKnown RBP31.86■■■□□ 2.69
TSPAN4-207ENST00000397411 BSDC1Q9NW68 430 aaPredicted RBP31.86■■■□□ 2.69
TSPAN4-207ENST00000397411 KDM2BQ8NHM5 1336 aa31.85■■■□□ 2.69
TSPAN4-207ENST00000397411 RTFDC1Q9BY42 306 aaPredicted RBP31.85■■■□□ 2.69
TSPAN4-207ENST00000397411 VPS33BQ9H267 617 aa31.85■■■□□ 2.69
TSPAN4-207ENST00000397411 BICC1Q9H694 974 aaKnown RBP31.85■■■□□ 2.69
TSPAN4-207ENST00000397411 TNNQ9UQP3 1299 aa31.85■■■□□ 2.69
TSPAN4-207ENST00000397411 SNED1Q8TER0 1413 aa31.84■■■□□ 2.69
TSPAN4-207ENST00000397411 COL4A1P02462 1669 aa31.83■■■□□ 2.69
TSPAN4-207ENST00000397411 KAZALD1Q96I82 304 aa31.83■■■□□ 2.69
TSPAN4-207ENST00000397411 SPEF2Q9C093 1822 aa31.83■■■□□ 2.69
TSPAN4-207ENST00000397411 AOC3Q16853 763 aa31.82■■■□□ 2.68
TSPAN4-207ENST00000397411 NIM1KQ8IY84 436 aa31.82■■■□□ 2.68
TSPAN4-207ENST00000397411 DZIP1LQ8IYY4 767 aaKnown RBP31.82■■■□□ 2.68
TSPAN4-207ENST00000397411 EYA3Q99504 573 aa31.82■■■□□ 2.68
TSPAN4-207ENST00000397411 GGA1Q9UJY5 639 aa31.82■■■□□ 2.68
TSPAN4-207ENST00000397411 TIAM2Q8IVF5 1701 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms