RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 FRAT1Q92837 279 aaPredicted RBP26.81■■□□□ 1.88
TSPAN4-206ENST00000397408 CCDC85AQ96PX6 553 aaPredicted RBP26.81■■□□□ 1.88
TSPAN4-206ENST00000397408 C9orf78Q9NZ63 289 aaPredicted RBP26.81■■□□□ 1.88
TSPAN4-206ENST00000397408 TAF1P21675 1872 aa26.8■■□□□ 1.88
TSPAN4-206ENST00000397408 CCDC152Q4G0S7 254 aa26.8■■□□□ 1.88
TSPAN4-206ENST00000397408 CCDC93Q567U6 631 aa26.8■■□□□ 1.88
TSPAN4-206ENST00000397408 ARHGAP45Q92619 1136 aa26.8■■□□□ 1.88
TSPAN4-206ENST00000397408 FER1L6Q2WGJ9 1857 aa26.79■■□□□ 1.88
TSPAN4-206ENST00000397408 NFKBIEO00221 500 aa26.79■■□□□ 1.88
TSPAN4-206ENST00000397408 IPO8O15397 1037 aaKnown RBP26.79■■□□□ 1.88
TSPAN4-206ENST00000397408 PLA2G12BQ9BX93 195 aa26.79■■□□□ 1.88
TSPAN4-206ENST00000397408 YY1P25490 414 aa26.78■■□□□ 1.88
TSPAN4-206ENST00000397408 SLC51AQ86UW1 340 aa26.78■■□□□ 1.88
TSPAN4-206ENST00000397408 COL4A1P02462 1669 aa26.77■■□□□ 1.88
TSPAN4-206ENST00000397408 CCT4P50991 539 aaKnown RBP26.77■■□□□ 1.88
TSPAN4-206ENST00000397408 BBOX1O75936 387 aa26.76■■□□□ 1.87
TSPAN4-206ENST00000397408 TRIM27P14373 513 aa26.76■■□□□ 1.87
TSPAN4-206ENST00000397408 TTLL11Q8NHH1 800 aa26.76■■□□□ 1.87
TSPAN4-206ENST00000397408 CELF1Q92879 486 aaKnown RBP26.76■■□□□ 1.87
TSPAN4-206ENST00000397408 SEC31BQ9NQW1 1179 aa26.76■■□□□ 1.87
TSPAN4-206ENST00000397408 ATF7IPQ6VMQ6 1270 aa26.75■■□□□ 1.87
TSPAN4-206ENST00000397408 TAOK3Q9H2K8 898 aa26.75■■□□□ 1.87
TSPAN4-206ENST00000397408 SNED1Q8TER0 1413 aa26.75■■□□□ 1.87
TSPAN4-206ENST00000397408 ZKSCAN2Q63HK3 967 aa26.74■■□□□ 1.87
TSPAN4-206ENST00000397408 TNNQ9UQP3 1299 aa26.74■■□□□ 1.87
TSPAN4-206ENST00000397408 ATP6V0A2Q9Y487 856 aa26.74■■□□□ 1.87
TSPAN4-206ENST00000397408 SBF1O95248 1867 aa26.74■■□□□ 1.87
TSPAN4-206ENST00000397408 NBPF7P0C2Y1 421 aaPredicted RBP26.73■■□□□ 1.87
TSPAN4-206ENST00000397408 C9orf131Q5VYM1 1079 aa26.73■■□□□ 1.87
TSPAN4-206ENST00000397408 CC2D2BQ6DHV5 1058 aa26.73■■□□□ 1.87
TSPAN4-206ENST00000397408 RTKN2Q8IZC4 609 aa26.73■■□□□ 1.87
TSPAN4-206ENST00000397408 GREM2Q9H772 168 aa26.73■■□□□ 1.87
TSPAN4-206ENST00000397408 UTYO14607 1347 aa26.73■■□□□ 1.87
TSPAN4-206ENST00000397408 LTBP3Q9NS15 1303 aa26.73■■□□□ 1.87
TSPAN4-206ENST00000397408 TMX4Q9H1E5 349 aaPredicted RBP26.73■■□□□ 1.87
TSPAN4-206ENST00000397408 RNF181Q9P0P0 153 aa26.73■■□□□ 1.87
TSPAN4-206ENST00000397408 RTL9Q8NET4 1388 aa26.72■■□□□ 1.87
TSPAN4-206ENST00000397408 PRELPP51888 382 aa26.72■■□□□ 1.87
TSPAN4-206ENST00000397408 FAM161AQ3B820 660 aa26.72■■□□□ 1.87
TSPAN4-206ENST00000397408 TMC4Q7Z404 712 aa26.72■■□□□ 1.87
TSPAN4-206ENST00000397408 CLUAP1Q96AJ1 413 aa26.72■■□□□ 1.87
TSPAN4-206ENST00000397408 SUCLG2Q96I99 432 aa26.72■■□□□ 1.87
TSPAN4-206ENST00000397408 LMNB1P20700 586 aa26.71■■□□□ 1.87
TSPAN4-206ENST00000397408 RPS8P62241 208 aaKnown RBP26.71■■□□□ 1.87
TSPAN4-206ENST00000397408 FOXO4P98177 505 aa26.71■■□□□ 1.87
TSPAN4-206ENST00000397408 FKBP4Q02790 459 aaKnown RBP eCLIP26.71■■□□□ 1.871e-6■■■■□ 24.5
TSPAN4-206ENST00000397408 EPHA10Q5JZY3 1008 aa26.71■■□□□ 1.87
TSPAN4-206ENST00000397408 USP44Q9H0E7 712 aa26.71■■□□□ 1.87
TSPAN4-206ENST00000397408 RCAN3Q9UKA8 241 aa26.71■■□□□ 1.87
TSPAN4-206ENST00000397408 LRRC37AA6NMS7 1700 aa26.7■■□□□ 1.87
TSPAN4-206ENST00000397408 CSF1RP07333 972 aa26.7■■□□□ 1.86
TSPAN4-206ENST00000397408 SP8Q8IXZ3 490 aa26.7■■□□□ 1.86
TSPAN4-206ENST00000397408 CDC5LQ99459 802 aaKnown RBP26.7■■□□□ 1.86
TSPAN4-206ENST00000397408 INTS3Q68E01 1043 aaKnown RBP26.69■■□□□ 1.86
TSPAN4-206ENST00000397408 ANKRD18AQ8IVF6 992 aa26.69■■□□□ 1.86
TSPAN4-206ENST00000397408 CHMP3Q9Y3E7 222 aa26.69■■□□□ 1.86
TSPAN4-206ENST00000397408 CCDC88AQ3V6T2 1871 aa26.69■■□□□ 1.86
TSPAN4-206ENST00000397408 GRIPAP1Q4V328 841 aa26.68■■□□□ 1.86
TSPAN4-206ENST00000397408 LMBR1LQ6UX01 489 aa26.68■■□□□ 1.86
TSPAN4-206ENST00000397408 ITGA6P23229 1130 aa26.67■■□□□ 1.86
TSPAN4-206ENST00000397408 KAZALD1Q96I82 304 aa26.67■■□□□ 1.86
TSPAN4-206ENST00000397408 PSMD1Q99460 953 aa26.67■■□□□ 1.86
TSPAN4-206ENST00000397408 ZNF277Q9NRM2 450 aaPredicted RBP26.66■■□□□ 1.86
TSPAN4-206ENST00000397408 SPEF2Q9C093 1822 aa26.66■■□□□ 1.86
TSPAN4-206ENST00000397408 FTSJ3Q8IY81 847 aaKnown RBP26.65■■□□□ 1.86
TSPAN4-206ENST00000397408 BICC1Q9H694 974 aaKnown RBP26.65■■□□□ 1.86
TSPAN4-206ENST00000397408 TIAM2Q8IVF5 1701 aa26.65■■□□□ 1.86
TSPAN4-206ENST00000397408 UBTFL1P0CB47 393 aaPredicted RBP26.65■■□□□ 1.86
TSPAN4-206ENST00000397408 DPP8Q6V1X1 898 aaPredicted RBP26.65■■□□□ 1.86
TSPAN4-206ENST00000397408 MPNDQ8N594 471 aa26.65■■□□□ 1.86
TSPAN4-206ENST00000397408 ANKRD18BA2A2Z9 1011 aa26.64■■□□□ 1.85
TSPAN4-206ENST00000397408 IFIT5Q13325 482 aaKnown RBP26.64■■□□□ 1.85
TSPAN4-206ENST00000397408 TMEM57Q8N5G2 664 aa26.64■■□□□ 1.85
TSPAN4-206ENST00000397408 MEIS3Q99687 375 aa26.64■■□□□ 1.85
TSPAN4-206ENST00000397408 IGHMBP2P38935 993 aaKnown RBP26.63■■□□□ 1.85
TSPAN4-206ENST00000397408 DZIP1LQ8IYY4 767 aaKnown RBP26.63■■□□□ 1.85
TSPAN4-206ENST00000397408 DICER1Q9UPY3 1922 aaKnown RBP26.63■■□□□ 1.85
TSPAN4-206ENST00000397408 IARSP41252 1262 aaKnown RBP26.62■■□□□ 1.85
TSPAN4-206ENST00000397408 RABL6Q3YEC7 729 aaPredicted RBP26.62■■□□□ 1.85
TSPAN4-206ENST00000397408 ANKRD44Q8N8A2 993 aa26.62■■□□□ 1.85
TSPAN4-206ENST00000397408 DUOX1Q9NRD9 1551 aa26.62■■□□□ 1.85
TSPAN4-206ENST00000397408 RLBP1P12271 317 aa26.61■■□□□ 1.85
TSPAN4-206ENST00000397408 GPSM2P81274 684 aa26.61■■□□□ 1.85
TSPAN4-206ENST00000397408 CCDC57Q2TAC2 916 aa26.61■■□□□ 1.85
TSPAN4-206ENST00000397408 BSDC1Q9NW68 430 aaPredicted RBP26.61■■□□□ 1.85
TSPAN4-206ENST00000397408 NSFL1CQ9UNZ2 370 aaKnown RBP26.61■■□□□ 1.85
TSPAN4-206ENST00000397408 SUPT20HQ8NEM7 779 aa26.6■■□□□ 1.85
TSPAN4-206ENST00000397408 RTFDC1Q9BY42 306 aaPredicted RBP26.6■■□□□ 1.85
TSPAN4-206ENST00000397408 LTBP1Q14766 1721 aa26.6■■□□□ 1.85
TSPAN4-206ENST00000397408 ZC3H4Q9UPT8 1303 aaKnown RBP26.6■■□□□ 1.85
TSPAN4-206ENST00000397408 MPHOSPH8Q99549 860 aa26.59■■□□□ 1.85
TSPAN4-206ENST00000397408 GNAI3P08754 354 aa26.58■■□□□ 1.85
TSPAN4-206ENST00000397408 TAF7LQ5H9L4 462 aa26.58■■□□□ 1.85
TSPAN4-206ENST00000397408 ZNF784Q8NCA9 323 aaPredicted RBP26.58■■□□□ 1.85
TSPAN4-206ENST00000397408 LRRFIP2Q9Y608 721 aaKnown RBP26.58■■□□□ 1.85
TSPAN4-206ENST00000397408 PPIP5K2O43314 1243 aa26.57■■□□□ 1.84
TSPAN4-206ENST00000397408 ITPRIPQ8IWB1 547 aa26.57■■□□□ 1.84
TSPAN4-206ENST00000397408 ANKIB1Q9P2G1 1089 aa26.57■■□□□ 1.84
TSPAN4-206ENST00000397408 HDAC5Q9UQL6 1122 aa26.57■■□□□ 1.84
TSPAN4-206ENST00000397408 PLIN1O60240 522 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms