RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ABCC12Q96J65 1359 aa29.26■■■□□ 2.27
TSPAN4-202ENST00000397396 PRR5LQ6MZQ0 368 aa29.25■■■□□ 2.27
TSPAN4-202ENST00000397396 TTLL11Q8NHH1 800 aa29.25■■■□□ 2.27
TSPAN4-202ENST00000397396 NLRP3Q96P20 1036 aa29.25■■■□□ 2.27
TSPAN4-202ENST00000397396 NRXN2Q9P2S2 1712 aa29.25■■■□□ 2.27
TSPAN4-202ENST00000397396 IFIT5Q13325 482 aaKnown RBP29.23■■■□□ 2.27
TSPAN4-202ENST00000397396 MSL1Q68DK7 614 aa29.23■■■□□ 2.27
TSPAN4-202ENST00000397396 ZBTB47Q9UFB7 747 aaPredicted RBP29.23■■■□□ 2.27
TSPAN4-202ENST00000397396 RAB11FIP3O75154 756 aa29.22■■■□□ 2.27
TSPAN4-202ENST00000397396 SF3B3Q15393 1217 aaKnown RBP29.22■■■□□ 2.27
TSPAN4-202ENST00000397396 COPRSQ9NQ92 184 aa29.22■■■□□ 2.27
TSPAN4-202ENST00000397396 NOP58Q9Y2X3 529 aaKnown RBP29.22■■■□□ 2.27
TSPAN4-202ENST00000397396 CASZ1Q86V15 1759 aa29.22■■■□□ 2.27
TSPAN4-202ENST00000397396 ANKRD18BA2A2Z9 1011 aa29.21■■■□□ 2.27
TSPAN4-202ENST00000397396 ERC1Q8IUD2 1116 aa29.21■■■□□ 2.27
TSPAN4-202ENST00000397396 FBXO3Q9UK99 471 aa29.21■■■□□ 2.27
TSPAN4-202ENST00000397396 SURF6O75683 361 aaKnown RBP29.2■■■□□ 2.27
TSPAN4-202ENST00000397396 R3HDM1Q15032 1099 aaKnown RBP29.2■■■□□ 2.27
TSPAN4-202ENST00000397396 FAM161AQ3B820 660 aa29.2■■■□□ 2.27
TSPAN4-202ENST00000397396 MTFR1LQ9H019 292 aa29.2■■■□□ 2.27
TSPAN4-202ENST00000397396 RFX5P48382 616 aaPredicted RBP29.2■■■□□ 2.26
TSPAN4-202ENST00000397396 TAF7LQ5H9L4 462 aa29.2■■■□□ 2.26
TSPAN4-202ENST00000397396 ITGA6P23229 1130 aa29.19■■■□□ 2.26
TSPAN4-202ENST00000397396 G3BP1Q13283 466 aaKnown RBP eCLIP29.19■■■□□ 2.26
TSPAN4-202ENST00000397396 GREM2Q9H772 168 aa29.19■■■□□ 2.26
TSPAN4-202ENST00000397396 PTPN12Q05209 780 aaKnown RBP29.18■■■□□ 2.26
TSPAN4-202ENST00000397396 OS9Q13438 667 aaPredicted RBP29.18■■■□□ 2.26
TSPAN4-202ENST00000397396 CDC5LQ99459 802 aaKnown RBP29.18■■■□□ 2.26
TSPAN4-202ENST00000397396 BRIP1Q9BX63 1249 aa29.17■■■□□ 2.26
TSPAN4-202ENST00000397396 EXOC6BQ9Y2D4 811 aa29.17■■■□□ 2.26
TSPAN4-202ENST00000397396 CIAO1O76071 339 aa29.15■■■□□ 2.26
TSPAN4-202ENST00000397396 POLD1P28340 1107 aa29.15■■■□□ 2.26
TSPAN4-202ENST00000397396 NUCB1Q02818 461 aa29.15■■■□□ 2.26
TSPAN4-202ENST00000397396 KIF1BPQ96EK5 621 aa29.15■■■□□ 2.26
TSPAN4-202ENST00000397396 CCDC85AQ96PX6 553 aaPredicted RBP29.15■■■□□ 2.26
TSPAN4-202ENST00000397396 LRRCC1Q9C099 1032 aa29.15■■■□□ 2.26
TSPAN4-202ENST00000397396 PDGFDQ9GZP0 370 aaPredicted RBP29.15■■■□□ 2.26
TSPAN4-202ENST00000397396 PDZRN3Q9UPQ7 1066 aa29.15■■■□□ 2.26
TSPAN4-202ENST00000397396 TNRC6CQ9HCJ0 1690 aaKnown RBP29.14■■■□□ 2.25
TSPAN4-202ENST00000397396 PDE6BP35913 854 aa29.14■■■□□ 2.25
TSPAN4-202ENST00000397396 PA2G4Q9UQ80 394 aaKnown RBP29.14■■■□□ 2.25
TSPAN4-202ENST00000397396 LRP5O75197 1615 aa29.13■■■□□ 2.25
TSPAN4-202ENST00000397396 CRY2Q49AN0 593 aa29.13■■■□□ 2.25
TSPAN4-202ENST00000397396 ANKRD45Q5TZF3 282 aa29.13■■■□□ 2.25
TSPAN4-202ENST00000397396 KLRG2A4D1S0 409 aaPredicted RBP29.12■■■□□ 2.25
TSPAN4-202ENST00000397396 EYA2O00167 538 aa29.12■■■□□ 2.25
TSPAN4-202ENST00000397396 IGHMBP2P38935 993 aaKnown RBP29.12■■■□□ 2.25
TSPAN4-202ENST00000397396 IL15P40933 162 aaPredicted RBP29.12■■■□□ 2.25
TSPAN4-202ENST00000397396 DDX46Q7L014 1031 aaKnown RBP29.12■■■□□ 2.25
TSPAN4-202ENST00000397396 CHD1LQ86WJ1 897 aa29.12■■■□□ 2.25
TSPAN4-202ENST00000397396 CCDC24Q8N4L8 307 aa29.12■■■□□ 2.25
TSPAN4-202ENST00000397396 RPGRQ92834 1020 aaKnown RBP29.11■■■□□ 2.25
TSPAN4-202ENST00000397396 SIL1Q9H173 461 aa29.11■■■□□ 2.25
TSPAN4-202ENST00000397396 C3orf67Q6ZVT6 689 aa29.1■■■□□ 2.25
TSPAN4-202ENST00000397396 ANKRD18AQ8IVF6 992 aa29.1■■■□□ 2.25
TSPAN4-202ENST00000397396 KLHDC4Q8TBB5 520 aa29.1■■■□□ 2.25
TSPAN4-202ENST00000397396 RHPN1Q8TCX5 695 aa29.1■■■□□ 2.25
TSPAN4-202ENST00000397396 MPHOSPH8Q99549 860 aa29.1■■■□□ 2.25
TSPAN4-202ENST00000397396 ZBTB7AO95365 584 aa29.09■■■□□ 2.25
TSPAN4-202ENST00000397396 LDHAL6AQ6ZMR3 332 aa29.09■■■□□ 2.25
TSPAN4-202ENST00000397396 RBM17Q96I25 401 aaKnown RBP29.09■■■□□ 2.25
TSPAN4-202ENST00000397396 C10orf71Q711Q0 1435 aa29.08■■■□□ 2.24
TSPAN4-202ENST00000397396 PSDA5PKW4 1024 aaPredicted RBP29.07■■■□□ 2.24
TSPAN4-202ENST00000397396 APBB1O00213 710 aa29.07■■■□□ 2.24
TSPAN4-202ENST00000397396 ZNF594Q96JF6 807 aaPredicted RBP29.07■■■□□ 2.24
TSPAN4-202ENST00000397396 SEC31BQ9NQW1 1179 aa29.07■■■□□ 2.24
TSPAN4-202ENST00000397396 CNNM1Q9NRU3 951 aa29.07■■■□□ 2.24
TSPAN4-202ENST00000397396 CLASRPQ8N2M8 674 aaKnown RBP29.06■■■□□ 2.24
TSPAN4-202ENST00000397396 ANKRD31Q8N7Z5 1873 aa29.06■■■□□ 2.24
TSPAN4-202ENST00000397396 HOXA10P31260 410 aaPredicted RBP29.05■■■□□ 2.24
TSPAN4-202ENST00000397396 GRAPQ13588 217 aa29.05■■■□□ 2.24
TSPAN4-202ENST00000397396 GRAPLQ8TC17 118 aaPredicted RBP29.05■■■□□ 2.24
TSPAN4-202ENST00000397396 LNPKQ9C0E8 428 aa29.05■■■□□ 2.24
TSPAN4-202ENST00000397396 MROH5Q6ZUA9 1318 aa29.05■■■□□ 2.24
TSPAN4-202ENST00000397396 NPR1P16066 1061 aa29.04■■■□□ 2.24
TSPAN4-202ENST00000397396 CRAMP1Q96RY5 1269 aa29.04■■■□□ 2.24
TSPAN4-202ENST00000397396 RPS8P62241 208 aaKnown RBP29.03■■■□□ 2.24
TSPAN4-202ENST00000397396 ATG9AQ7Z3C6 839 aa29.03■■■□□ 2.24
TSPAN4-202ENST00000397396 TMC4Q7Z404 712 aa29.03■■■□□ 2.24
TSPAN4-202ENST00000397396 GPR108Q9NPR9 543 aa29.03■■■□□ 2.24
TSPAN4-202ENST00000397396 BSDC1Q9NW68 430 aaPredicted RBP29.03■■■□□ 2.24
TSPAN4-202ENST00000397396 CEP126Q9P2H0 1117 aa29.03■■■□□ 2.24
TSPAN4-202ENST00000397396 ATF5Q9Y2D1 282 aaPredicted RBP29.03■■■□□ 2.24
TSPAN4-202ENST00000397396 RIPOR2Q9Y4F9 1068 aa29.02■■■□□ 2.24
TSPAN4-202ENST00000397396 SASH1O94885 1247 aa29.01■■■□□ 2.23
TSPAN4-202ENST00000397396 SRGNP10124 158 aa29.01■■■□□ 2.23
TSPAN4-202ENST00000397396 LRRC24Q50LG9 513 aa29.01■■■□□ 2.23
TSPAN4-202ENST00000397396 MASTLQ96GX5 879 aa29.01■■■□□ 2.23
TSPAN4-202ENST00000397396 H0YIN7 160 aa29■■■□□ 2.23
TSPAN4-202ENST00000397396 ALDH1B1P30837 517 aa29■■■□□ 2.23
TSPAN4-202ENST00000397396 METTL24Q5JXM2 366 aa29■■■□□ 2.23
TSPAN4-202ENST00000397396 PUS3Q9BZE2 481 aaKnown RBP29■■■□□ 2.23
TSPAN4-202ENST00000397396 AKAP2Q9Y2D5 859 aa29■■■□□ 2.23
TSPAN4-202ENST00000397396 BBOX1O75936 387 aa28.99■■■□□ 2.23
TSPAN4-202ENST00000397396 CELF1Q92879 486 aaKnown RBP28.99■■■□□ 2.23
TSPAN4-202ENST00000397396 IL1RAPL2Q9NP60 686 aa28.99■■■□□ 2.23
TSPAN4-202ENST00000397396 SMARCA5O60264 1052 aaPredicted RBP28.98■■■□□ 2.23
TSPAN4-202ENST00000397396 TFCP2Q12800 502 aa28.98■■■□□ 2.23
TSPAN4-202ENST00000397396 STYK1Q6J9G0 422 aa28.98■■■□□ 2.23
TSPAN4-202ENST00000397396 C2CD5Q86YS7 1000 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms