RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 FAM177BA6PVY3 158 aa15.67■□□□□ 0.1
LMCD1-202ENST00000397386 GTF2E1P29083 439 aaPredicted RBP15.67■□□□□ 0.1
LMCD1-202ENST00000397386 IFIT5Q13325 482 aaKnown RBP15.67■□□□□ 0.1
LMCD1-202ENST00000397386 SF3B3Q15393 1217 aaKnown RBP15.67■□□□□ 0.1
LMCD1-202ENST00000397386 ERFEQ4G0M1 354 aa15.67■□□□□ 0.1
LMCD1-202ENST00000397386 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
LMCD1-202ENST00000397386 RHPN1Q8TCX5 695 aa15.67■□□□□ 0.1
LMCD1-202ENST00000397386 LNPKQ9C0E8 428 aa15.67■□□□□ 0.1
LMCD1-202ENST00000397386 CHMP3Q9Y3E7 222 aa15.67■□□□□ 0.1
LMCD1-202ENST00000397386 CIAO1O76071 339 aa15.66■□□□□ 0.1
LMCD1-202ENST00000397386 HCLS1P14317 486 aaPredicted RBP15.66■□□□□ 0.1
LMCD1-202ENST00000397386 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
LMCD1-202ENST00000397386 CCDC152Q4G0S7 254 aa15.66■□□□□ 0.1
LMCD1-202ENST00000397386 PA2G4Q9UQ80 394 aaKnown RBP15.66■□□□□ 0.1
LMCD1-202ENST00000397386 OS9Q13438 667 aaPredicted RBP15.65■□□□□ 0.1
LMCD1-202ENST00000397386 CNBD1Q8NA66 436 aa15.65■□□□□ 0.1
LMCD1-202ENST00000397386 UPF1Q92900 1129 aaKnown RBP eCLIP15.65■□□□□ 0.1
LMCD1-202ENST00000397386 ANKRD18BA2A2Z9 1011 aa15.64■□□□□ 0.09
LMCD1-202ENST00000397386 POLRMTO00411 1230 aaKnown RBP15.64■□□□□ 0.09
LMCD1-202ENST00000397386 MSH5O43196 834 aa15.64■□□□□ 0.09
LMCD1-202ENST00000397386 SERPINB2P05120 415 aa15.64■□□□□ 0.09
LMCD1-202ENST00000397386 ITGA6P23229 1130 aa15.64■□□□□ 0.09
LMCD1-202ENST00000397386 PDE4AP27815 886 aa15.64■□□□□ 0.09
LMCD1-202ENST00000397386 NLRP3Q96P20 1036 aa15.64■□□□□ 0.09
LMCD1-202ENST00000397386 GREM2Q9H772 168 aa15.64■□□□□ 0.09
LMCD1-202ENST00000397386 EYA2O00167 538 aa15.63■□□□□ 0.09
LMCD1-202ENST00000397386 APBB1O00213 710 aa15.63■□□□□ 0.09
LMCD1-202ENST00000397386 IL15P40933 162 aaPredicted RBP15.63■□□□□ 0.09
LMCD1-202ENST00000397386 RGS3P49796 1198 aa15.63■□□□□ 0.09
LMCD1-202ENST00000397386 KLHDC4Q8TBB5 520 aa15.63■□□□□ 0.09
LMCD1-202ENST00000397386 ABCC12Q96J65 1359 aa15.63■□□□□ 0.09
LMCD1-202ENST00000397386 NPHP1O15259 732 aa15.63■□□□□ 0.09
LMCD1-202ENST00000397386 SASH1O94885 1247 aa15.63■□□□□ 0.09
LMCD1-202ENST00000397386 DDR1Q08345 913 aa15.63■□□□□ 0.09
LMCD1-202ENST00000397386 PRR5LQ6MZQ0 368 aa15.63■□□□□ 0.09
LMCD1-202ENST00000397386 CLASRPQ8N2M8 674 aaKnown RBP15.63■□□□□ 0.09
LMCD1-202ENST00000397386 SLC16A10Q8TF71 515 aa15.63■□□□□ 0.09
LMCD1-202ENST00000397386 ST5P78524 1137 aa15.62■□□□□ 0.09
LMCD1-202ENST00000397386 TAF7LQ5H9L4 462 aa15.62■□□□□ 0.09
LMCD1-202ENST00000397386 ATG9AQ7Z3C6 839 aa15.62■□□□□ 0.09
LMCD1-202ENST00000397386 SKAP1Q86WV1 359 aa15.62■□□□□ 0.09
LMCD1-202ENST00000397386 SIL1Q9H173 461 aa15.62■□□□□ 0.09
LMCD1-202ENST00000397386 NRXN2Q9P2S2 1712 aa15.61■□□□□ 0.09
LMCD1-202ENST00000397386 SMARCA5O60264 1052 aaPredicted RBP15.61■□□□□ 0.09
LMCD1-202ENST00000397386 PLEKHM2Q8IWE5 1019 aa15.61■□□□□ 0.09
LMCD1-202ENST00000397386 CDC5LQ99459 802 aaKnown RBP15.61■□□□□ 0.09
LMCD1-202ENST00000397386 OSBPL3Q9H4L5 887 aa15.61■□□□□ 0.09
LMCD1-202ENST00000397386 GPR108Q9NPR9 543 aa15.61■□□□□ 0.09
LMCD1-202ENST00000397386 SALL3Q9BXA9 1300 aa15.61■□□□□ 0.09
LMCD1-202ENST00000397386 CCDC85AQ96PX6 553 aaPredicted RBP15.6■□□□□ 0.09
LMCD1-202ENST00000397386 IL1RAPL2Q9NP60 686 aa15.6■□□□□ 0.09
LMCD1-202ENST00000397386 LRP5O75197 1615 aa15.6■□□□□ 0.09
LMCD1-202ENST00000397386 KLRG2A4D1S0 409 aaPredicted RBP15.59■□□□□ 0.09
LMCD1-202ENST00000397386 MMP10P09238 476 aa15.59■□□□□ 0.09
LMCD1-202ENST00000397386 LDHAL6AQ6ZMR3 332 aa15.59■□□□□ 0.09
LMCD1-202ENST00000397386 ZNF594Q96JF6 807 aaPredicted RBP15.59■□□□□ 0.09
LMCD1-202ENST00000397386 STAP2Q9UGK3 403 aa15.59■□□□□ 0.09
LMCD1-202ENST00000397386 RIPOR2Q9Y4F9 1068 aa15.59■□□□□ 0.09
LMCD1-202ENST00000397386 PARP3Q9Y6F1 533 aa15.59■□□□□ 0.09
LMCD1-202ENST00000397386 CRY2Q49AN0 593 aa15.58■□□□□ 0.09
LMCD1-202ENST00000397386 C3orf67Q6ZVT6 689 aa15.58■□□□□ 0.09
LMCD1-202ENST00000397386 C16orf71Q8IYS4 520 aaPredicted RBP15.58■□□□□ 0.09
LMCD1-202ENST00000397386 AOX1Q06278 1338 aa15.58■□□□□ 0.09
LMCD1-202ENST00000397386 MX1P20591 662 aa15.58■□□□□ 0.08
LMCD1-202ENST00000397386 IGHMBP2P38935 993 aaKnown RBP15.58■□□□□ 0.08
LMCD1-202ENST00000397386 PDE1AP54750 535 aa15.58■□□□□ 0.08
LMCD1-202ENST00000397386 TFCP2Q12800 502 aa15.58■□□□□ 0.08
LMCD1-202ENST00000397386 LRRC24Q50LG9 513 aa15.58■□□□□ 0.08
LMCD1-202ENST00000397386 MPHOSPH8Q99549 860 aa15.58■□□□□ 0.08
LMCD1-202ENST00000397386 BRIP1Q9BX63 1249 aa15.58■□□□□ 0.08
LMCD1-202ENST00000397386 PUS3Q9BZE2 481 aaKnown RBP15.58■□□□□ 0.08
LMCD1-202ENST00000397386 CEP126Q9P2H0 1117 aa15.58■□□□□ 0.08
LMCD1-202ENST00000397386 BMP2KLQ5H9B9 411 aa15.57■□□□□ 0.08
LMCD1-202ENST00000397386 EAF2Q96CJ1 260 aaPredicted RBP15.57■□□□□ 0.08
LMCD1-202ENST00000397386 SEC31BQ9NQW1 1179 aa15.57■□□□□ 0.08
LMCD1-202ENST00000397386 CNNM1Q9NRU3 951 aa15.57■□□□□ 0.08
LMCD1-202ENST00000397386 AKAP2Q9Y2D5 859 aa15.57■□□□□ 0.08
LMCD1-202ENST00000397386 MROH5Q6ZUA9 1318 aa15.57■□□□□ 0.08
LMCD1-202ENST00000397386 CASZ1Q86V15 1759 aa15.57■□□□□ 0.08
LMCD1-202ENST00000397386 TTC41PQ6P2S7 1318 aa15.56■□□□□ 0.08
LMCD1-202ENST00000397386 IFIT2P09913 472 aaKnown RBP15.56■□□□□ 0.08
LMCD1-202ENST00000397386 TNNI3KQ59H18 835 aa15.56■□□□□ 0.08
LMCD1-202ENST00000397386 DDX46Q7L014 1031 aaKnown RBP15.56■□□□□ 0.08
LMCD1-202ENST00000397386 AACSQ86V21 672 aa15.56■□□□□ 0.08
LMCD1-202ENST00000397386 ANKRD18AQ8IVF6 992 aa15.56■□□□□ 0.08
LMCD1-202ENST00000397386 OTUD7AQ8TE49 926 aaPredicted RBP15.56■□□□□ 0.08
LMCD1-202ENST00000397386 BSDC1Q9NW68 430 aaPredicted RBP15.56■□□□□ 0.08
LMCD1-202ENST00000397386 FPGT-TNNI3KV9GXZ4 949 aa15.56■□□□□ 0.08
LMCD1-202ENST00000397386 TNRC6CQ9HCJ0 1690 aaKnown RBP15.55■□□□□ 0.08
LMCD1-202ENST00000397386 HOXA10P31260 410 aaPredicted RBP15.55■□□□□ 0.08
LMCD1-202ENST00000397386 RPS8P62241 208 aaKnown RBP15.55■□□□□ 0.08
LMCD1-202ENST00000397386 GPATCH3Q96I76 525 aa15.55■□□□□ 0.08
LMCD1-202ENST00000397386 TTC22Q5TAA0 569 aa15.54■□□□□ 0.08
LMCD1-202ENST00000397386 MSL1Q68DK7 614 aa15.54■□□□□ 0.08
LMCD1-202ENST00000397386 CCDC24Q8N4L8 307 aa15.54■□□□□ 0.08
LMCD1-202ENST00000397386 VGLL2Q8N8G2 317 aa15.54■□□□□ 0.08
LMCD1-202ENST00000397386 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.54■□□□□ 0.08
LMCD1-202ENST00000397386 ERC2O15083 957 aa15.53■□□□□ 0.08
LMCD1-202ENST00000397386 PDE8BO95263 885 aa15.53■□□□□ 0.08
LMCD1-202ENST00000397386 PDE6BP35913 854 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms