RNA–Protein interactions for RNA: ENST00000397317.8

CLDN7-202, Transcript of claudin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN7, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-202ENST00000397317 CTSWP56202 376 aa22.52■■□□□ 1.2
CLDN7-202ENST00000397317 ATF7IPQ6VMQ6 1270 aa22.52■■□□□ 1.2
CLDN7-202ENST00000397317 C7orf43Q8WVR3 580 aa22.52■■□□□ 1.2
CLDN7-202ENST00000397317 ZNF219Q9P2Y4 722 aaPredicted RBP22.52■■□□□ 1.2
CLDN7-202ENST00000397317 CACNA1SQ13698 1873 aa22.51■■□□□ 1.19
CLDN7-202ENST00000397317 PPEF1O14829 653 aaPredicted RBP22.51■■□□□ 1.19
CLDN7-202ENST00000397317 GRAPQ13588 217 aa22.51■■□□□ 1.19
CLDN7-202ENST00000397317 ZKSCAN2Q63HK3 967 aa22.51■■□□□ 1.19
CLDN7-202ENST00000397317 CC2D2BQ6DHV5 1058 aa22.51■■□□□ 1.19
CLDN7-202ENST00000397317 GRAPLQ8TC17 118 aaPredicted RBP22.51■■□□□ 1.19
CLDN7-202ENST00000397317 TRIM27P14373 513 aa22.5■■□□□ 1.19
CLDN7-202ENST00000397317 CCDC93Q567U6 631 aa22.5■■□□□ 1.19
CLDN7-202ENST00000397317 TMC4Q7Z404 712 aa22.5■■□□□ 1.19
CLDN7-202ENST00000397317 TMX4Q9H1E5 349 aaPredicted RBP22.5■■□□□ 1.19
CLDN7-202ENST00000397317 UTYO14607 1347 aa22.5■■□□□ 1.19
CLDN7-202ENST00000397317 GRIPAP1Q4V328 841 aa22.49■■□□□ 1.19
CLDN7-202ENST00000397317 TTLL11Q8NHH1 800 aa22.49■■□□□ 1.19
CLDN7-202ENST00000397317 RCAN3Q9UKA8 241 aa22.49■■□□□ 1.19
CLDN7-202ENST00000397317 RTL9Q8NET4 1388 aa22.49■■□□□ 1.19
CLDN7-202ENST00000397317 RTKN2Q8IZC4 609 aa22.48■■□□□ 1.19
CLDN7-202ENST00000397317 INTS3Q68E01 1043 aaKnown RBP22.47■■□□□ 1.19
CLDN7-202ENST00000397317 ATP6V0A2Q9Y487 856 aa22.47■■□□□ 1.19
CLDN7-202ENST00000397317 MYH3P11055 1940 aa22.47■■□□□ 1.19
CLDN7-202ENST00000397317 CSF1RP07333 972 aa22.46■■□□□ 1.19
CLDN7-202ENST00000397317 NBPF7P0C2Y1 421 aaPredicted RBP22.46■■□□□ 1.19
CLDN7-202ENST00000397317 USP44Q9H0E7 712 aa22.46■■□□□ 1.19
CLDN7-202ENST00000397317 LTBP3Q9NS15 1303 aa22.46■■□□□ 1.19
CLDN7-202ENST00000397317 NFKBIEO00221 500 aa22.45■■□□□ 1.18
CLDN7-202ENST00000397317 RPS8P62241 208 aaKnown RBP22.45■■□□□ 1.18
CLDN7-202ENST00000397317 FOXO4P98177 505 aa22.45■■□□□ 1.18
CLDN7-202ENST00000397317 SP8Q8IXZ3 490 aa22.45■■□□□ 1.18
CLDN7-202ENST00000397317 CELF1Q92879 486 aaKnown RBP22.45■■□□□ 1.18
CLDN7-202ENST00000397317 CCDC85AQ96PX6 553 aaPredicted RBP22.45■■□□□ 1.18
CLDN7-202ENST00000397317 CDC5LQ99459 802 aaKnown RBP22.45■■□□□ 1.18
CLDN7-202ENST00000397317 TAOK3Q9H2K8 898 aa22.45■■□□□ 1.18
CLDN7-202ENST00000397317 GREM2Q9H772 168 aa22.45■■□□□ 1.18
CLDN7-202ENST00000397317 SEC31BQ9NQW1 1179 aa22.44■■□□□ 1.18
CLDN7-202ENST00000397317 HDAC5Q9UQL6 1122 aa22.44■■□□□ 1.18
CLDN7-202ENST00000397317 FER1L6Q2WGJ9 1857 aa22.43■■□□□ 1.18
CLDN7-202ENST00000397317 RASSF7Q02833 373 aa22.43■■□□□ 1.18
CLDN7-202ENST00000397317 OLFM4Q6UX06 510 aa22.43■■□□□ 1.18
CLDN7-202ENST00000397317 ANKRD18AQ8IVF6 992 aa22.43■■□□□ 1.18
CLDN7-202ENST00000397317 FTSJ3Q8IY81 847 aaKnown RBP22.43■■□□□ 1.18
CLDN7-202ENST00000397317 CLUAP1Q96AJ1 413 aa22.43■■□□□ 1.18
CLDN7-202ENST00000397317 SNED1Q8TER0 1413 aa22.42■■□□□ 1.18
CLDN7-202ENST00000397317 MS4A1P11836 297 aa22.42■■□□□ 1.18
CLDN7-202ENST00000397317 LMNB1P20700 586 aa22.42■■□□□ 1.18
CLDN7-202ENST00000397317 FKBP4Q02790 459 aaKnown RBP eCLIP22.42■■□□□ 1.18
CLDN7-202ENST00000397317 SUCLG2Q96I99 432 aa22.42■■□□□ 1.18
CLDN7-202ENST00000397317 PSMD1Q99460 953 aa22.42■■□□□ 1.18
CLDN7-202ENST00000397317 UBTFL1P0CB47 393 aaPredicted RBP22.41■■□□□ 1.18
CLDN7-202ENST00000397317 ITGA6P23229 1130 aa22.41■■□□□ 1.18
CLDN7-202ENST00000397317 FAM161AQ3B820 660 aa22.41■■□□□ 1.18
CLDN7-202ENST00000397317 LMBR1LQ6UX01 489 aa22.41■■□□□ 1.18
CLDN7-202ENST00000397317 DZIP1LQ8IYY4 767 aaKnown RBP22.41■■□□□ 1.18
CLDN7-202ENST00000397317 TNNQ9UQP3 1299 aa22.41■■□□□ 1.18
CLDN7-202ENST00000397317 IFIT5Q13325 482 aaKnown RBP22.4■■□□□ 1.18
CLDN7-202ENST00000397317 EPHA10Q5JZY3 1008 aa22.4■■□□□ 1.18
CLDN7-202ENST00000397317 C9orf131Q5VYM1 1079 aa22.4■■□□□ 1.18
CLDN7-202ENST00000397317 KAZALD1Q96I82 304 aa22.4■■□□□ 1.18
CLDN7-202ENST00000397317 CHMP3Q9Y3E7 222 aa22.4■■□□□ 1.18
CLDN7-202ENST00000397317 TAF1P21675 1872 aa22.4■■□□□ 1.18
CLDN7-202ENST00000397317 ANKRD18BA2A2Z9 1011 aa22.39■■□□□ 1.17
CLDN7-202ENST00000397317 GNAI3P08754 354 aa22.39■■□□□ 1.17
CLDN7-202ENST00000397317 RABL6Q3YEC7 729 aaPredicted RBP22.39■■□□□ 1.17
CLDN7-202ENST00000397317 TMEM57Q8N5G2 664 aa22.39■■□□□ 1.17
CLDN7-202ENST00000397317 BICC1Q9H694 974 aaKnown RBP22.39■■□□□ 1.17
CLDN7-202ENST00000397317 RNF181Q9P0P0 153 aa22.39■■□□□ 1.17
CLDN7-202ENST00000397317 LRRC37AA6NMS7 1700 aa22.39■■□□□ 1.17
CLDN7-202ENST00000397317 IGHMBP2P38935 993 aaKnown RBP22.38■■□□□ 1.17
CLDN7-202ENST00000397317 CCDC57Q2TAC2 916 aa22.38■■□□□ 1.17
CLDN7-202ENST00000397317 DPP8Q6V1X1 898 aaPredicted RBP22.38■■□□□ 1.17
CLDN7-202ENST00000397317 MPNDQ8N594 471 aa22.38■■□□□ 1.17
CLDN7-202ENST00000397317 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.38■■□□□ 1.17
CLDN7-202ENST00000397317 COL4A1P02462 1669 aa22.38■■□□□ 1.17
CLDN7-202ENST00000397317 SBF1O95248 1867 aa22.37■■□□□ 1.17
CLDN7-202ENST00000397317 C1QTNF8P60827 252 aa22.37■■□□□ 1.17
CLDN7-202ENST00000397317 SUPT20HQ8NEM7 779 aa22.37■■□□□ 1.17
CLDN7-202ENST00000397317 MEIS3Q99687 375 aa22.37■■□□□ 1.17
CLDN7-202ENST00000397317 BSDC1Q9NW68 430 aaPredicted RBP22.37■■□□□ 1.17
CLDN7-202ENST00000397317 ZC3H4Q9UPT8 1303 aaKnown RBP22.36■■□□□ 1.17
CLDN7-202ENST00000397317 PRELPP51888 382 aa22.36■■□□□ 1.17
CLDN7-202ENST00000397317 SLC51AQ86UW1 340 aa22.36■■□□□ 1.17
CLDN7-202ENST00000397317 MPHOSPH8Q99549 860 aa22.36■■□□□ 1.17
CLDN7-202ENST00000397317 RTFDC1Q9BY42 306 aaPredicted RBP22.36■■□□□ 1.17
CLDN7-202ENST00000397317 ANKRD44Q8N8A2 993 aa22.35■■□□□ 1.17
CLDN7-202ENST00000397317 VPS33BQ9H267 617 aa22.35■■□□□ 1.17
CLDN7-202ENST00000397317 ZNF277Q9NRM2 450 aaPredicted RBP22.35■■□□□ 1.17
CLDN7-202ENST00000397317 NSFL1CQ9UNZ2 370 aaKnown RBP22.35■■□□□ 1.17
CLDN7-202ENST00000397317 RLBP1P12271 317 aa22.34■■□□□ 1.17
CLDN7-202ENST00000397317 IARSP41252 1262 aaKnown RBP22.34■■□□□ 1.17
CLDN7-202ENST00000397317 TAF7LQ5H9L4 462 aa22.34■■□□□ 1.17
CLDN7-202ENST00000397317 ITPRIPQ8IWB1 547 aa22.34■■□□□ 1.17
CLDN7-202ENST00000397317 GPSM2P81274 684 aa22.33■■□□□ 1.17
CLDN7-202ENST00000397317 PODXL2Q9NZ53 605 aa22.33■■□□□ 1.17
CLDN7-202ENST00000397317 ANKIB1Q9P2G1 1089 aa22.33■■□□□ 1.17
CLDN7-202ENST00000397317 LRRFIP2Q9Y608 721 aaKnown RBP22.33■■□□□ 1.17
CLDN7-202ENST00000397317 PANK1Q8TE04 598 aa22.32■■□□□ 1.16
CLDN7-202ENST00000397317 MINPP1Q9UNW1 487 aa22.32■■□□□ 1.16
CLDN7-202ENST00000397317 XDHP47989 1333 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms