RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 HAND2P61296 217 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 SF3A3Q12874 501 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMU1-201ENST00000397149 KAT14Q9H8E8 782 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 IFT81Q8WYA0 676 aa14.05□□□□□ -0.16
SMU1-201ENST00000397149 CASQ2O14958 399 aaPredicted RBP14.04□□□□□ -0.16
SMU1-201ENST00000397149 LCA5Q86VQ0 697 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 NUF2Q9BZD4 464 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 IMPG2Q9BZV3 1241 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 GAS8O95995 478 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 GPTP24298 496 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 CEP85LQ5SZL2 805 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 CPLX4Q7Z7G2 160 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 ZSCAN30Q86W11 494 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 SWAP70Q9UH65 585 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 KIF5BP33176 963 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 MPRIPQ6WCQ1 1025 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 STMN2Q93045 179 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 CACYBPQ9HB71 228 aaKnown RBP14.04□□□□□ -0.16
SMU1-201ENST00000397149 RBM28Q9NW13 759 aaKnown RBP14.04□□□□□ -0.16
SMU1-201ENST00000397149 CALM1P0DP23 149 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 CALM2P0DP24 149 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 CALM3P0DP25 149 aa14.04□□□□□ -0.16
SMU1-201ENST00000397149 NCBP1Q09161 790 aaKnown RBP14.04□□□□□ -0.16
SMU1-201ENST00000397149 KIAA1524Q8TCG1 905 aa14.03□□□□□ -0.16
SMU1-201ENST00000397149 AKAP2Q9Y2D5 859 aa14.03□□□□□ -0.16
SMU1-201ENST00000397149 RABGAP1Q9Y3P9 1069 aa14.03□□□□□ -0.16
SMU1-201ENST00000397149 MICU3Q86XE3 530 aa14.03□□□□□ -0.16
SMU1-201ENST00000397149 TRIM6Q9C030 488 aaPredicted RBP14.03□□□□□ -0.16
SMU1-201ENST00000397149 CNTLNQ9NXG0 1405 aa14.03□□□□□ -0.16
SMU1-201ENST00000397149 SLC26A6Q9BXS9 759 aa14.03□□□□□ -0.16
SMU1-201ENST00000397149 RBM26Q5T8P6 1007 aaKnown RBP14.03□□□□□ -0.16
SMU1-201ENST00000397149 TTC12Q9H892 705 aaPredicted RBP14.03□□□□□ -0.16
SMU1-201ENST00000397149 CCDC172P0C7W6 258 aa14.03□□□□□ -0.16
SMU1-201ENST00000397149 PPP1R7Q15435 360 aa14.03□□□□□ -0.16
SMU1-201ENST00000397149 RRAGBQ5VZM2 374 aa14.03□□□□□ -0.16
SMU1-201ENST00000397149 KIFC2Q96AC6 838 aa14.03□□□□□ -0.16
SMU1-201ENST00000397149 TXNDC9O14530 226 aa14.02□□□□□ -0.16
SMU1-201ENST00000397149 HARSP12081 509 aaKnown RBP14.02□□□□□ -0.16
SMU1-201ENST00000397149 SLC5A1P13866 664 aa14.02□□□□□ -0.16
SMU1-201ENST00000397149 TMEM67Q5HYA8 995 aa14.02□□□□□ -0.16
SMU1-201ENST00000397149 CIB2O75838 187 aa14.02□□□□□ -0.16
SMU1-201ENST00000397149 TRMT112Q9UI30 125 aaKnown RBP14.02□□□□□ -0.16
SMU1-201ENST00000397149 MCM4P33991 863 aa14.02□□□□□ -0.16
SMU1-201ENST00000397149 CCDC129Q6ZRS4 1044 aa14.02□□□□□ -0.17
SMU1-201ENST00000397149 SDCCAG8Q86SQ7 713 aaPredicted RBP14.02□□□□□ -0.17
SMU1-201ENST00000397149 RRS1Q15050 365 aaKnown RBP14.02□□□□□ -0.17
SMU1-201ENST00000397149 CCDC110Q8TBZ0 833 aa14.02□□□□□ -0.17
SMU1-201ENST00000397149 STX8Q9UNK0 236 aa14.02□□□□□ -0.17
SMU1-201ENST00000397149 E7EVH7 732 aa14.02□□□□□ -0.17
SMU1-201ENST00000397149 RPGRIP1LQ68CZ1 1315 aa14.01□□□□□ -0.17
SMU1-201ENST00000397149 BICDL2A1A5D9 508 aa14.01□□□□□ -0.17
SMU1-201ENST00000397149 KRT9P35527 623 aa14.01□□□□□ -0.17
SMU1-201ENST00000397149 FAM69CQ0P6D2 419 aa14.01□□□□□ -0.17
SMU1-201ENST00000397149 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.01□□□□□ -0.17
SMU1-201ENST00000397149 PDCD7Q8N8D1 485 aaKnown RBP14.01□□□□□ -0.17
SMU1-201ENST00000397149 BAG1Q99933 345 aaPredicted RBP14.01□□□□□ -0.17
SMU1-201ENST00000397149 ATP6V0A2Q9Y487 856 aa14.01□□□□□ -0.17
SMU1-201ENST00000397149 RAB11FIP3O75154 756 aa14.01□□□□□ -0.17
SMU1-201ENST00000397149 TMEM57Q8N5G2 664 aa14.01□□□□□ -0.17
SMU1-201ENST00000397149 IFIT5Q13325 482 aaKnown RBP14.01□□□□□ -0.17
SMU1-201ENST00000397149 SNRKQ9NRH2 765 aa14.01□□□□□ -0.17
SMU1-201ENST00000397149 TTLL3Q9Y4R7 772 aa14.01□□□□□ -0.17
SMU1-201ENST00000397149 TACC1O75410 805 aa14□□□□□ -0.17
SMU1-201ENST00000397149 GKAP1Q5VSY0 366 aaPredicted RBP14□□□□□ -0.17
SMU1-201ENST00000397149 VIMP08670 466 aaKnown RBP14□□□□□ -0.17
SMU1-201ENST00000397149 SLF2Q8IX21 1173 aa14□□□□□ -0.17
SMU1-201ENST00000397149 TBC1D31Q96DN5 1066 aa14□□□□□ -0.17
SMU1-201ENST00000397149 TMOD3Q9NYL9 352 aa14□□□□□ -0.17
SMU1-201ENST00000397149 HLA-DOAP06340 250 aa14□□□□□ -0.17
SMU1-201ENST00000397149 PNISRQ8TF01 805 aaKnown RBP14□□□□□ -0.17
SMU1-201ENST00000397149 GIPC1O14908 333 aa14□□□□□ -0.17
SMU1-201ENST00000397149 TTC14Q96N46 770 aa14□□□□□ -0.17
SMU1-201ENST00000397149 ZNF830Q96NB3 372 aaPredicted RBP14□□□□□ -0.17
SMU1-201ENST00000397149 AGTPBP1Q9UPW5 1226 aa14□□□□□ -0.17
SMU1-201ENST00000397149 PICALMQ13492 652 aa14□□□□□ -0.17
SMU1-201ENST00000397149 MCM10Q7L590 875 aa14□□□□□ -0.17
SMU1-201ENST00000397149 PPFIBP2Q8ND30 876 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 GSDMBQ8TAX9 411 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 UBLCP1Q8WVY7 318 aaPredicted RBP13.99□□□□□ -0.17
SMU1-201ENST00000397149 ADCY5O95622 1261 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 INF2Q27J81 1249 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 HEATR3Q7Z4Q2 680 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 USP16Q9Y5T5 823 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 SMIM24O75264 130 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 ATP2A2P16615 1042 aaKnown RBP13.99□□□□□ -0.17
SMU1-201ENST00000397149 STAT6P42226 847 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 NEDD9Q14511 834 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 MGEA5O60502 916 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 SH2D4BQ5SQS7 431 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 FAM170AA1A519 330 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 PCK1P35558 622 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 INTS8Q75QN2 995 aaKnown RBP13.99□□□□□ -0.17
SMU1-201ENST00000397149 ZNF710Q8N1W2 664 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 MORC4Q8TE76 937 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 NACA2Q9H009 215 aa13.99□□□□□ -0.17
SMU1-201ENST00000397149 ALDH3A1P30838 453 aa13.98□□□□□ -0.17
SMU1-201ENST00000397149 SCAND2PQ9GZW5 306 aaPredicted RBP13.98□□□□□ -0.17
SMU1-201ENST00000397149 STMN4Q9H169 189 aaPredicted RBP13.98□□□□□ -0.17
SMU1-201ENST00000397149 DAPK3O43293 454 aa13.98□□□□□ -0.17
SMU1-201ENST00000397149 MCM7P33993 719 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms