RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 NOGQ13253 232 aa17.84■□□□□ 0.45
SEC13-205ENST00000397101 CIAPIN1Q6FI81 312 aa17.84■□□□□ 0.45
SEC13-205ENST00000397101 C3orf67Q6ZVT6 689 aa17.84■□□□□ 0.45
SEC13-205ENST00000397101 SP8Q8IXZ3 490 aa17.84■□□□□ 0.45
SEC13-205ENST00000397101 GLIS2Q9BZE0 524 aaPredicted RBP17.84■□□□□ 0.45
SEC13-205ENST00000397101 ZBTB3Q9H5J0 574 aa17.84■□□□□ 0.45
SEC13-205ENST00000397101 TSKSQ9UJT2 592 aa17.84■□□□□ 0.45
SEC13-205ENST00000397101 ABCC4O15439 1325 aa17.83■□□□□ 0.44
SEC13-205ENST00000397101 NEFMP07197 916 aa17.83■□□□□ 0.44
SEC13-205ENST00000397101 MYL6BP14649 208 aa17.83■□□□□ 0.44
SEC13-205ENST00000397101 TNIP1Q15025 636 aa17.83■□□□□ 0.44
SEC13-205ENST00000397101 TCERG1O14776 1098 aaKnown RBP17.82■□□□□ 0.44
SEC13-205ENST00000397101 DPP8Q6V1X1 898 aaPredicted RBP17.82■□□□□ 0.44
SEC13-205ENST00000397101 LRP10Q7Z4F1 713 aa17.82■□□□□ 0.44
SEC13-205ENST00000397101 SLC51AQ86UW1 340 aa17.82■□□□□ 0.44
SEC13-205ENST00000397101 UTP14AQ9BVJ6 771 aaKnown RBP17.82■□□□□ 0.44
SEC13-205ENST00000397101 HIRAP54198 1017 aaPredicted RBP17.81■□□□□ 0.44
SEC13-205ENST00000397101 MPNDQ8N594 471 aa17.81■□□□□ 0.44
SEC13-205ENST00000397101 BCL2L13Q9BXK5 485 aa17.81■□□□□ 0.44
SEC13-205ENST00000397101 TNRC18O15417 2968 aaPredicted RBP17.81■□□□□ 0.44
SEC13-205ENST00000397101 DGKZQ13574 1117 aa17.8■□□□□ 0.44
SEC13-205ENST00000397101 TMC4Q7Z404 712 aa17.8■□□□□ 0.44
SEC13-205ENST00000397101 DPF2Q92785 391 aa17.8■□□□□ 0.44
SEC13-205ENST00000397101 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
SEC13-205ENST00000397101 H7C1D1 291 aa17.79■□□□□ 0.44
SEC13-205ENST00000397101 HSP90AB3PQ58FF7 597 aa17.79■□□□□ 0.44
SEC13-205ENST00000397101 TRPM4Q8TD43 1214 aa17.79■□□□□ 0.44
SEC13-205ENST00000397101 YTHDC1Q96MU7 727 aaKnown RBP17.79■□□□□ 0.44
SEC13-205ENST00000397101 PLEKHF1Q96S99 279 aa17.79■□□□□ 0.44
SEC13-205ENST00000397101 SAGE1Q9NXZ1 904 aa17.79■□□□□ 0.44
SEC13-205ENST00000397101 CNOT7Q9UIV1 285 aaKnown RBP17.79■□□□□ 0.44
SEC13-205ENST00000397101 GRAPQ13588 217 aa17.78■□□□□ 0.44
SEC13-205ENST00000397101 PDIA6Q15084 440 aa17.78■□□□□ 0.44
SEC13-205ENST00000397101 NFE2L2Q16236 605 aa17.78■□□□□ 0.44
SEC13-205ENST00000397101 GRAPLQ8TC17 118 aaPredicted RBP17.78■□□□□ 0.44
SEC13-205ENST00000397101 PNNQ9H307 717 aaKnown RBP17.78■□□□□ 0.44
SEC13-205ENST00000397101 CASP8AP2Q9UKL3 1982 aa17.77■□□□□ 0.44
SEC13-205ENST00000397101 RAD17O75943 681 aa17.77■□□□□ 0.44
SEC13-205ENST00000397101 HUNKP57058 714 aa17.77■□□□□ 0.44
SEC13-205ENST00000397101 DDX46Q7L014 1031 aaKnown RBP17.77■□□□□ 0.44
SEC13-205ENST00000397101 BABAM1Q9NWV8 329 aa17.77■□□□□ 0.44
SEC13-205ENST00000397101 YDJCA8MPS7 323 aa17.76■□□□□ 0.43
SEC13-205ENST00000397101 CCDC146Q8IYE0 955 aa17.76■□□□□ 0.43
SEC13-205ENST00000397101 CFAP44Q96MT7 982 aa17.76■□□□□ 0.43
SEC13-205ENST00000397101 ZNF408Q9H9D4 720 aa17.76■□□□□ 0.43
SEC13-205ENST00000397101 ANKRD36CQ5JPF3 1778 aa17.76■□□□□ 0.43
SEC13-205ENST00000397101 DLG5Q8TDM6 1919 aa17.75■□□□□ 0.43
SEC13-205ENST00000397101 FAM155AB1AL88 458 aaPredicted RBP17.75■□□□□ 0.43
SEC13-205ENST00000397101 RGMBQ6NW40 437 aa17.75■□□□□ 0.43
SEC13-205ENST00000397101 NLRP10Q86W26 655 aa17.75■□□□□ 0.43
SEC13-205ENST00000397101 MICALL2Q8IY33 904 aa17.75■□□□□ 0.43
SEC13-205ENST00000397101 CCDC102AQ96A19 550 aa17.75■□□□□ 0.43
SEC13-205ENST00000397101 RPS12P25398 132 aaKnown RBP17.74■□□□□ 0.43
SEC13-205ENST00000397101 USP48Q86UV5 1035 aa17.74■□□□□ 0.43
SEC13-205ENST00000397101 ZIC5Q96T25 663 aa17.74■□□□□ 0.43
SEC13-205ENST00000397101 SH3TC1Q8TE82 1336 aa17.73■□□□□ 0.43
SEC13-205ENST00000397101 TCIRG1Q13488 830 aa17.73■□□□□ 0.43
SEC13-205ENST00000397101 GBA2Q9HCG7 927 aaPredicted RBP17.73■□□□□ 0.43
SEC13-205ENST00000397101 TSPYL4Q9UJ04 414 aa17.73■□□□□ 0.43
SEC13-205ENST00000397101 DUOX1Q9NRD9 1551 aa17.73■□□□□ 0.43
SEC13-205ENST00000397101 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
SEC13-205ENST00000397101 HCLS1P14317 486 aaPredicted RBP17.72■□□□□ 0.43
SEC13-205ENST00000397101 KRT26Q7Z3Y9 468 aa17.72■□□□□ 0.43
SEC13-205ENST00000397101 REM2Q8IYK8 340 aaPredicted RBP17.72■□□□□ 0.43
SEC13-205ENST00000397101 C2orf69Q8N8R5 385 aa17.72■□□□□ 0.43
SEC13-205ENST00000397101 THUMPD2Q9BTF0 503 aaKnown RBP17.72■□□□□ 0.43
SEC13-205ENST00000397101 LRRC37AA6NMS7 1700 aa17.72■□□□□ 0.43
SEC13-205ENST00000397101 SHTN1A0MZ66 631 aa17.71■□□□□ 0.43
SEC13-205ENST00000397101 WASHC4Q2M389 1173 aa17.71■□□□□ 0.43
SEC13-205ENST00000397101 RUNDC1Q96C34 613 aa17.71■□□□□ 0.43
SEC13-205ENST00000397101 TRMT112Q9UI30 125 aaKnown RBP17.71■□□□□ 0.43
SEC13-205ENST00000397101 LAMB2P55268 1798 aa17.71■□□□□ 0.43
SEC13-205ENST00000397101 PSMD14O00487 310 aa17.7■□□□□ 0.42
SEC13-205ENST00000397101 EIF2S2P20042 333 aaKnown RBP17.7■□□□□ 0.42
SEC13-205ENST00000397101 HNRNPUQ00839 825 aaKnown RBP eCLIP17.7■□□□□ 0.42
SEC13-205ENST00000397101 PROSER3Q2NL68 480 aa17.7■□□□□ 0.42
SEC13-205ENST00000397101 COPS6Q7L5N1 327 aa17.7■□□□□ 0.42
SEC13-205ENST00000397101 SAMD7Q7Z3H4 446 aa17.7■□□□□ 0.42
SEC13-205ENST00000397101 ZBTB12Q9Y330 459 aaPredicted RBP17.7■□□□□ 0.42
SEC13-205ENST00000397101 PDE4DIPQ5VU43 2346 aa17.7■□□□□ 0.42
SEC13-205ENST00000397101 KIF23Q02241 960 aaPredicted RBP17.69■□□□□ 0.42
SEC13-205ENST00000397101 SF3B3Q15393 1217 aaKnown RBP17.69■□□□□ 0.42
SEC13-205ENST00000397101 DCPSQ96C86 337 aaKnown RBP17.69■□□□□ 0.42
SEC13-205ENST00000397101 RNF186Q9NXI6 227 aa17.69■□□□□ 0.42
SEC13-205ENST00000397101 SLC10A3P09131 477 aa17.68■□□□□ 0.42
SEC13-205ENST00000397101 ZNF157P51786 506 aaPredicted RBP17.68■□□□□ 0.42
SEC13-205ENST00000397101 XAGE3Q8WTP9 111 aa17.68■□□□□ 0.42
SEC13-205ENST00000397101 EYA3Q99504 573 aa17.68■□□□□ 0.42
SEC13-205ENST00000397101 SALL2Q9Y467 1007 aaPredicted RBP17.68■□□□□ 0.42
SEC13-205ENST00000397101 ZNF609O15014 1411 aa17.67■□□□□ 0.42
SEC13-205ENST00000397101 ANXA1P04083 346 aa17.67■□□□□ 0.42
SEC13-205ENST00000397101 TBC1D10BQ4KMP7 808 aaPredicted RBP17.67■□□□□ 0.42
SEC13-205ENST00000397101 DBNDD1Q9H9R9 158 aa17.67■□□□□ 0.42
SEC13-205ENST00000397101 NSFL1CQ9UNZ2 370 aaKnown RBP17.67■□□□□ 0.42
SEC13-205ENST00000397101 APAF1O14727 1248 aa17.66■□□□□ 0.42
SEC13-205ENST00000397101 EGFRP00533 1210 aa17.66■□□□□ 0.42
SEC13-205ENST00000397101 NEUROD2Q15784 382 aa17.66■□□□□ 0.42
SEC13-205ENST00000397101 CSRNP1Q96S65 589 aa17.66■□□□□ 0.42
SEC13-205ENST00000397101 POLLQ9UGP5 575 aa17.66■□□□□ 0.42
SEC13-205ENST00000397101 RTL9Q8NET4 1388 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms