RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 SASH1O94885 1247 aa16.77■□□□□ 0.28
MCF2L-209ENST00000397036 IL15P40933 162 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-209ENST00000397036 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.28
MCF2L-209ENST00000397036 NBPF5PQ86XG9 351 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-209ENST00000397036 CLASRPQ8N2M8 674 aaKnown RBP16.77■□□□□ 0.28
MCF2L-209ENST00000397036 GPR108Q9NPR9 543 aa16.77■□□□□ 0.28
MCF2L-209ENST00000397036 AOX1Q06278 1338 aa16.77■□□□□ 0.27
MCF2L-209ENST00000397036 ANKRD18BA2A2Z9 1011 aa16.76■□□□□ 0.27
MCF2L-209ENST00000397036 APBB1O00213 710 aa16.76■□□□□ 0.27
MCF2L-209ENST00000397036 HCLS1P14317 486 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-209ENST00000397036 SLC15A2Q16348 729 aa16.76■□□□□ 0.27
MCF2L-209ENST00000397036 BMP2KLQ5H9B9 411 aa16.76■□□□□ 0.27
MCF2L-209ENST00000397036 COL23A1Q86Y22 540 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-209ENST00000397036 C16orf71Q8IYS4 520 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-209ENST00000397036 CHMP3Q9Y3E7 222 aa16.76■□□□□ 0.27
MCF2L-209ENST00000397036 RIC1Q4ADV7 1423 aa16.76■□□□□ 0.27
MCF2L-209ENST00000397036 ITGA6P23229 1130 aa16.75■□□□□ 0.27
MCF2L-209ENST00000397036 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
MCF2L-209ENST00000397036 ERFEQ4G0M1 354 aa16.75■□□□□ 0.27
MCF2L-209ENST00000397036 BICDL1Q6ZP65 573 aa16.75■□□□□ 0.27
MCF2L-209ENST00000397036 ATG9AQ7Z3C6 839 aa16.75■□□□□ 0.27
MCF2L-209ENST00000397036 GREM2Q9H772 168 aa16.75■□□□□ 0.27
MCF2L-209ENST00000397036 STK32BQ9NY57 414 aa16.75■□□□□ 0.27
MCF2L-209ENST00000397036 C4AP0C0L4 1744 aa16.75■□□□□ 0.27
MCF2L-209ENST00000397036 GTF2E1P29083 439 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-209ENST00000397036 PDE1AP54750 535 aa16.75■□□□□ 0.27
MCF2L-209ENST00000397036 NUTM1Q86Y26 1132 aa16.75■□□□□ 0.27
MCF2L-209ENST00000397036 KLHDC4Q8TBB5 520 aa16.75■□□□□ 0.27
MCF2L-209ENST00000397036 PNPLA7Q6ZV29 1317 aa16.74■□□□□ 0.27
MCF2L-209ENST00000397036 COL24A1Q17RW2 1714 aa16.74■□□□□ 0.27
MCF2L-209ENST00000397036 FAM177BA6PVY3 158 aa16.74■□□□□ 0.27
MCF2L-209ENST00000397036 NLRP3Q96P20 1036 aa16.74■□□□□ 0.27
MCF2L-209ENST00000397036 IL1RAPL2Q9NP60 686 aa16.74■□□□□ 0.27
MCF2L-209ENST00000397036 MX1P20591 662 aa16.73■□□□□ 0.27
MCF2L-209ENST00000397036 BACH2Q9BYV9 841 aa16.73■□□□□ 0.27
MCF2L-209ENST00000397036 SIL1Q9H173 461 aa16.73■□□□□ 0.27
MCF2L-209ENST00000397036 RIPOR2Q9Y4F9 1068 aa16.73■□□□□ 0.27
MCF2L-209ENST00000397036 TAF7LQ5H9L4 462 aa16.72■□□□□ 0.27
MCF2L-209ENST00000397036 OTUD7AQ8TE49 926 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-209ENST00000397036 TTC41PQ6P2S7 1318 aa16.72■□□□□ 0.27
MCF2L-209ENST00000397036 POLRMTO00411 1230 aaKnown RBP16.71■□□□□ 0.27
MCF2L-209ENST00000397036 SERPINB2P05120 415 aa16.71■□□□□ 0.27
MCF2L-209ENST00000397036 TTC22Q5TAA0 569 aa16.71■□□□□ 0.27
MCF2L-209ENST00000397036 LDHAL6AQ6ZMR3 332 aa16.71■□□□□ 0.27
MCF2L-209ENST00000397036 DEFB132Q7Z7B7 95 aa16.71■□□□□ 0.27
MCF2L-209ENST00000397036 CNBD1Q8NA66 436 aa16.71■□□□□ 0.27
MCF2L-209ENST00000397036 EAF2Q96CJ1 260 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-209ENST00000397036 ANO8Q9HCE9 1232 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-209ENST00000397036 CEP126Q9P2H0 1117 aa16.71■□□□□ 0.27
MCF2L-209ENST00000397036 TFCP2Q12800 502 aa16.7■□□□□ 0.26
MCF2L-209ENST00000397036 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
MCF2L-209ENST00000397036 ZNF594Q96JF6 807 aaPredicted RBP16.7■□□□□ 0.26
MCF2L-209ENST00000397036 CDC5LQ99459 802 aaKnown RBP16.7■□□□□ 0.26
MCF2L-209ENST00000397036 MYH3P11055 1940 aa16.7■□□□□ 0.26
MCF2L-209ENST00000397036 ABCC12Q96J65 1359 aa16.7■□□□□ 0.26
MCF2L-209ENST00000397036 KLRG2A4D1S0 409 aaPredicted RBP16.7■□□□□ 0.26
MCF2L-209ENST00000397036 IFIT2P09913 472 aaKnown RBP16.7■□□□□ 0.26
MCF2L-209ENST00000397036 C8orf34Q49A92 452 aa16.7■□□□□ 0.26
MCF2L-209ENST00000397036 TNNI3KQ59H18 835 aa16.7■□□□□ 0.26
MCF2L-209ENST00000397036 PRR5LQ6MZQ0 368 aa16.7■□□□□ 0.26
MCF2L-209ENST00000397036 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
MCF2L-209ENST00000397036 PUS3Q9BZE2 481 aaKnown RBP16.7■□□□□ 0.26
MCF2L-209ENST00000397036 AKAP2Q9Y2D5 859 aa16.7■□□□□ 0.26
MCF2L-209ENST00000397036 FPGT-TNNI3KV9GXZ4 949 aa16.7■□□□□ 0.26
MCF2L-209ENST00000397036 LAMB2P55268 1798 aa16.69■□□□□ 0.26
MCF2L-209ENST00000397036 DDR1Q08345 913 aa16.69■□□□□ 0.26
MCF2L-209ENST00000397036 AACSQ86V21 672 aa16.69■□□□□ 0.26
MCF2L-209ENST00000397036 ECHDC1Q9NTX5 307 aa16.69■□□□□ 0.26
MCF2L-209ENST00000397036 ERC2O15083 957 aa16.68■□□□□ 0.26
MCF2L-209ENST00000397036 GSPT1P15170 499 aaKnown RBP16.68■□□□□ 0.26
MCF2L-209ENST00000397036 IGHMBP2P38935 993 aaKnown RBP16.68■□□□□ 0.26
MCF2L-209ENST00000397036 ST5P78524 1137 aa16.68■□□□□ 0.26
MCF2L-209ENST00000397036 SLC16A10Q8TF71 515 aa16.68■□□□□ 0.26
MCF2L-209ENST00000397036 CCDC85AQ96PX6 553 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-209ENST00000397036 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-209ENST00000397036 DDX60Q8IY21 1712 aaKnown RBP16.68■□□□□ 0.26
MCF2L-209ENST00000397036 MROH5Q6ZUA9 1318 aa16.68■□□□□ 0.26
MCF2L-209ENST00000397036 MSH5O43196 834 aa16.67■□□□□ 0.26
MCF2L-209ENST00000397036 GLRX3O76003 335 aaKnown RBP16.67■□□□□ 0.26
MCF2L-209ENST00000397036 CRY2Q49AN0 593 aa16.67■□□□□ 0.26
MCF2L-209ENST00000397036 C3orf67Q6ZVT6 689 aa16.67■□□□□ 0.26
MCF2L-209ENST00000397036 PI4K2BQ8TCG2 481 aa16.67■□□□□ 0.26
MCF2L-209ENST00000397036 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
MCF2L-209ENST00000397036 TSHZ2Q9NRE2 1034 aa16.67■□□□□ 0.26
MCF2L-209ENST00000397036 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
MCF2L-209ENST00000397036 BSDC1Q9NW68 430 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-209ENST00000397036 NPHP1O15259 732 aa16.66■□□□□ 0.26
MCF2L-209ENST00000397036 VGLL2Q8N8G2 317 aa16.66■□□□□ 0.26
MCF2L-209ENST00000397036 SEC31BQ9NQW1 1179 aa16.66■□□□□ 0.26
MCF2L-209ENST00000397036 QSER1Q2KHR3 1735 aa16.66■□□□□ 0.26
MCF2L-209ENST00000397036 EIF5BO60841 1220 aaKnown RBP16.65■□□□□ 0.26
MCF2L-209ENST00000397036 PDE8BO95263 885 aa16.65■□□□□ 0.26
MCF2L-209ENST00000397036 RPS8P62241 208 aaKnown RBP16.65■□□□□ 0.26
MCF2L-209ENST00000397036 ANKRD18AQ8IVF6 992 aa16.65■□□□□ 0.26
MCF2L-209ENST00000397036 BRIP1Q9BX63 1249 aa16.65■□□□□ 0.26
MCF2L-209ENST00000397036 LRP5O75197 1615 aa16.65■□□□□ 0.26
MCF2L-209ENST00000397036 HOXA10P31260 410 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-209ENST00000397036 METTL24Q5JXM2 366 aa16.65■□□□□ 0.26
MCF2L-209ENST00000397036 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
MCF2L-209ENST00000397036 CCDC8Q9H0W5 538 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms