RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 MEIS3Q99687 375 aa20.65■□□□□ 0.9
AP1S3-202ENST00000396653 CCDC152Q4G0S7 254 aa20.64■□□□□ 0.89
AP1S3-202ENST00000396653 CNKSR1Q969H4 720 aa20.64■□□□□ 0.89
AP1S3-202ENST00000396653 RBM17Q96I25 401 aaKnown RBP20.64■□□□□ 0.89
AP1S3-202ENST00000396653 SUCLG2Q96I99 432 aa20.64■□□□□ 0.89
AP1S3-202ENST00000396653 CRAMP1Q96RY5 1269 aa20.64■□□□□ 0.89
AP1S3-202ENST00000396653 PIM2Q9P1W9 311 aa20.64■□□□□ 0.89
AP1S3-202ENST00000396653 DDX19BQ9UMR2 479 aa20.64■□□□□ 0.89
AP1S3-202ENST00000396653 SLX4Q8IY92 1834 aa20.64■□□□□ 0.89
AP1S3-202ENST00000396653 TAF1P21675 1872 aa20.63■□□□□ 0.89
AP1S3-202ENST00000396653 CSF1RP07333 972 aa20.63■□□□□ 0.89
AP1S3-202ENST00000396653 ALDH1B1P30837 517 aa20.63■□□□□ 0.89
AP1S3-202ENST00000396653 FOXO4P98177 505 aa20.63■□□□□ 0.89
AP1S3-202ENST00000396653 TTLL11Q8NHH1 800 aa20.63■□□□□ 0.89
AP1S3-202ENST00000396653 CHMP4BQ9H444 224 aaKnown RBP20.63■□□□□ 0.89
AP1S3-202ENST00000396653 LRRC37AA6NMS7 1700 aa20.62■□□□□ 0.89
AP1S3-202ENST00000396653 RABL6Q3YEC7 729 aaPredicted RBP20.62■□□□□ 0.89
AP1S3-202ENST00000396653 C20orf194Q5TEA3 1177 aa20.62■□□□□ 0.89
AP1S3-202ENST00000396653 DDX46Q7L014 1031 aaKnown RBP20.62■□□□□ 0.89
AP1S3-202ENST00000396653 ZNF622Q969S3 477 aaKnown RBP eCLIP20.62■□□□□ 0.89
AP1S3-202ENST00000396653 KAZALD1Q96I82 304 aa20.62■□□□□ 0.89
AP1S3-202ENST00000396653 SPEF2Q9C093 1822 aa20.62■□□□□ 0.89
AP1S3-202ENST00000396653 ZBTB7BO15156 539 aaPredicted RBP20.61■□□□□ 0.89
AP1S3-202ENST00000396653 CENPBP07199 599 aaPredicted RBP20.61■□□□□ 0.89
AP1S3-202ENST00000396653 TTLL6Q8N841 843 aa20.61■□□□□ 0.89
AP1S3-202ENST00000396653 COG6Q9Y2V7 657 aa20.61■□□□□ 0.89
AP1S3-202ENST00000396653 EPHA10Q5JZY3 1008 aa20.6■□□□□ 0.89
AP1S3-202ENST00000396653 BICC1Q9H694 974 aaKnown RBP20.6■□□□□ 0.89
AP1S3-202ENST00000396653 SUPT16HQ9Y5B9 1047 aaKnown RBP20.6■□□□□ 0.89
AP1S3-202ENST00000396653 GNAI2P04899 355 aa20.59■□□□□ 0.89
AP1S3-202ENST00000396653 GRAPQ13588 217 aa20.59■□□□□ 0.89
AP1S3-202ENST00000396653 DALRD3Q5D0E6 543 aaKnown RBP20.59■□□□□ 0.89
AP1S3-202ENST00000396653 ANKRD44Q8N8A2 993 aa20.59■□□□□ 0.89
AP1S3-202ENST00000396653 GRAPLQ8TC17 118 aaPredicted RBP20.59■□□□□ 0.89
AP1S3-202ENST00000396653 LRRFIP2Q9Y608 721 aaKnown RBP20.59■□□□□ 0.89
AP1S3-202ENST00000396653 COL4A1P02462 1669 aa20.58■□□□□ 0.89
AP1S3-202ENST00000396653 FAM161AQ3B820 660 aa20.58■□□□□ 0.89
AP1S3-202ENST00000396653 PRPF40BQ6NWY9 871 aaKnown RBP20.58■□□□□ 0.89
AP1S3-202ENST00000396653 LMBR1LQ6UX01 489 aa20.58■□□□□ 0.89
AP1S3-202ENST00000396653 TMC4Q7Z404 712 aa20.58■□□□□ 0.89
AP1S3-202ENST00000396653 GREM2Q9H772 168 aa20.58■□□□□ 0.89
AP1S3-202ENST00000396653 CDC5LQ99459 802 aaKnown RBP20.57■□□□□ 0.88
AP1S3-202ENST00000396653 FER1L6Q2WGJ9 1857 aa20.56■□□□□ 0.88
AP1S3-202ENST00000396653 BBOX1O75936 387 aa20.56■□□□□ 0.88
AP1S3-202ENST00000396653 ITGA6P23229 1130 aa20.56■□□□□ 0.88
AP1S3-202ENST00000396653 MTX1Q13505 466 aa20.56■□□□□ 0.88
AP1S3-202ENST00000396653 A0A1B0GUL6 1792 aa20.55■□□□□ 0.88
AP1S3-202ENST00000396653 ANKRD18BA2A2Z9 1011 aa20.55■□□□□ 0.88
AP1S3-202ENST00000396653 IFIT5Q13325 482 aaKnown RBP20.55■□□□□ 0.88
AP1S3-202ENST00000396653 CELF1Q92879 486 aaKnown RBP20.55■□□□□ 0.88
AP1S3-202ENST00000396653 CCDC85AQ96PX6 553 aaPredicted RBP20.55■□□□□ 0.88
AP1S3-202ENST00000396653 SEC31BQ9NQW1 1179 aa20.55■□□□□ 0.88
AP1S3-202ENST00000396653 ZBTB40Q9NUA8 1239 aa20.55■□□□□ 0.88
AP1S3-202ENST00000396653 BCS1LQ9Y276 419 aa20.55■□□□□ 0.88
AP1S3-202ENST00000396653 CHMP3Q9Y3E7 222 aa20.55■□□□□ 0.88
AP1S3-202ENST00000396653 PPEF1O14829 653 aaPredicted RBP20.54■□□□□ 0.88
AP1S3-202ENST00000396653 RPS8P62241 208 aaKnown RBP20.54■□□□□ 0.88
AP1S3-202ENST00000396653 CCDC57Q2TAC2 916 aa20.54■□□□□ 0.88
AP1S3-202ENST00000396653 SOGA3Q5TF21 947 aa20.54■□□□□ 0.88
AP1S3-202ENST00000396653 CC2D2BQ6DHV5 1058 aa20.53■□□□□ 0.88
AP1S3-202ENST00000396653 ANKRD18AQ8IVF6 992 aa20.53■□□□□ 0.88
AP1S3-202ENST00000396653 C7orf43Q8WVR3 580 aa20.53■□□□□ 0.88
AP1S3-202ENST00000396653 LTBP1Q14766 1721 aa20.53■□□□□ 0.88
AP1S3-202ENST00000396653 SNED1Q8TER0 1413 aa20.53■□□□□ 0.88
AP1S3-202ENST00000396653 IGHMBP2P38935 993 aaKnown RBP20.52■□□□□ 0.88
AP1S3-202ENST00000396653 ATP6V0A2Q9Y487 856 aa20.52■□□□□ 0.88
AP1S3-202ENST00000396653 SRCAPQ6ZRS2 3230 aa20.52■□□□□ 0.88
AP1S3-202ENST00000396653 YBX3P16989 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
AP1S3-202ENST00000396653 GRIPAP1Q4V328 841 aa20.51■□□□□ 0.87
AP1S3-202ENST00000396653 SP8Q8IXZ3 490 aa20.51■□□□□ 0.87
AP1S3-202ENST00000396653 CRBNQ96SW2 442 aa20.51■□□□□ 0.87
AP1S3-202ENST00000396653 WWC3Q9ULE0 1092 aa20.51■□□□□ 0.87
AP1S3-202ENST00000396653 RFX5P48382 616 aaPredicted RBP20.5■□□□□ 0.87
AP1S3-202ENST00000396653 AAMPQ13685 434 aa20.5■□□□□ 0.87
AP1S3-202ENST00000396653 CCDC93Q567U6 631 aa20.5■□□□□ 0.87
AP1S3-202ENST00000396653 C1orf115Q9H7X2 142 aa20.5■□□□□ 0.87
AP1S3-202ENST00000396653 BSDC1Q9NW68 430 aaPredicted RBP20.5■□□□□ 0.87
AP1S3-202ENST00000396653 C21orf2O43822 256 aa20.49■□□□□ 0.87
AP1S3-202ENST00000396653 GRIN3BO60391 1043 aa20.49■□□□□ 0.87
AP1S3-202ENST00000396653 GPR162Q16538 588 aa20.49■□□□□ 0.87
AP1S3-202ENST00000396653 TAF7LQ5H9L4 462 aa20.49■□□□□ 0.87
AP1S3-202ENST00000396653 PELP1Q8IZL8 1130 aaKnown RBP20.49■□□□□ 0.87
AP1S3-202ENST00000396653 TMX4Q9H1E5 349 aaPredicted RBP20.49■□□□□ 0.87
AP1S3-202ENST00000396653 DCAF8L1A6NGE4 600 aa20.48■□□□□ 0.87
AP1S3-202ENST00000396653 SRGAP3O43295 1099 aa20.48■□□□□ 0.87
AP1S3-202ENST00000396653 ATP8B2P98198 1209 aa20.48■□□□□ 0.87
AP1S3-202ENST00000396653 CEP85Q6P2H3 762 aa20.48■□□□□ 0.87
AP1S3-202ENST00000396653 MPHOSPH8Q99549 860 aa20.48■□□□□ 0.87
AP1S3-202ENST00000396653 FBXO3Q9UK99 471 aa20.48■□□□□ 0.87
AP1S3-202ENST00000396653 RPAP2Q8IXW5 612 aaPredicted RBP20.47■□□□□ 0.87
AP1S3-202ENST00000396653 SBF1O95248 1867 aa20.47■□□□□ 0.87
AP1S3-202ENST00000396653 LTBP3Q9NS15 1303 aa20.47■□□□□ 0.87
AP1S3-202ENST00000396653 DUOX1Q9NRD9 1551 aa20.46■□□□□ 0.87
AP1S3-202ENST00000396653 CCDC88AQ3V6T2 1871 aa20.46■□□□□ 0.87
AP1S3-202ENST00000396653 PNMA6EA0A0J9YXQ4 647 aa20.46■□□□□ 0.87
AP1S3-202ENST00000396653 PTPN12Q05209 780 aaKnown RBP20.46■□□□□ 0.87
AP1S3-202ENST00000396653 POLA2Q14181 598 aa20.46■□□□□ 0.87
AP1S3-202ENST00000396653 RTKN2Q8IZC4 609 aa20.46■□□□□ 0.87
AP1S3-202ENST00000396653 SSH3Q8TE77 659 aa20.46■□□□□ 0.87
AP1S3-202ENST00000396653 COPRSQ9NQ92 184 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms